New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2625928 = | 26 (0.480) | 3 (0.060) | 3/244 | NT | 11.2% | intergenic (+106/‑194) | PP_2297/PP_t40 | integrase/tRNA‑His |
? | NC_002947 | 2625963 = | 23 (0.450) | intergenic (+141/‑159) | PP_2297/PP_t40 | integrase/tRNA‑His |
TGCGGACGAAGAGACTCGAACTCTTACAGCTTGCGCCGCTGGAACCTAAATCTGGTGCCAGAGCTTGGTCAATTCGCGAAACCCTTTAGATACAAGGGCTTGGCGCGCATCTTACACAGGTGGGACACACTATGCAACGCTAAATTCGTGTCCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2626082‑2625928 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgtcccaCCTGTGTAAGATGCGCGCCAAGCCCTTGTATCTAAAGGGTTTCGCGAATTGACCAAGCTCTGGCACCAGATTTAGGTTCCAGCGGCGCAAGCTGTAAGAGTTCGAGTCTCTTCGTCCGCACCATGCTTCTGTAAGGTTGTACCGCAA > NC_002947/2625963‑2626109 TGCGGACGAAGAGACTCGAACTCTTACAGCTTGCGCCGCTGGAACCTAAATCTGGTGCCAGAGCTTGGTCAATTCGCGAAACCCTTTAGATACAAGGGCTTGGCGCGCATCTTACACAGGTGGGACACACTATGCAACGCTAAATTCGT < 1:300039/149‑1 CAGGTGGGACACACTATGCAACGCTAAATTCGTGTCCCACCTGTGTAAGATGCGCGCCAAGCCCTTGTATCTAAAGGGTTTCGCGAATTGACCAAGCTCTGGCACCAGATTTAGGTTCCAGCG > 5:294456/1‑123 CAGGTGGGACACACTATGCAACGCTAAATTCGTGTCCCACCTGTGTAAGATGCGCGCCAAGCCCTTGTATCTAAAGGGTTTCGCGAATTGACCAAGCTCTGGCACCAGATTTAGGTTCCAGCG < 6:294456/123‑1 AGGTGGGACACACTATGCAACGCTAAATTCGTGTCCCACCTGTGTAAGATGCGCGCCAAGCCCTTGTATCTAAAGGGTTTCGCGAATTGACCAAGCTCTGGCACCAGATTTAGGTTCCAGCGGCGCAAGCTGTAAGAGTTCGAGTCTCT > 8:32512/1‑149 AATTCGTGTCCCACCTGTGTAAGATGCGCGCCAAGCCCTTGTATCTAAAGGGTTTCGCGAATTGACCAAGCTCTGGCACCAGATTTAGGTTCCAGCGGCGCAAGCTGTAAGAGTTCGAGTCTCTTCGTCCGCACCATGCTTCTGTAA < 7:32512/147‑1 CACCTGTGTAAGATGCGCGCCAAGCCCTTGTATCTAAAGGGTTTCGCGAATTGACCAAGCTCTGGCACCAGATTTAGGTTCCAGCGGCGCAAGCTGTAAGAGTTCGAGTCACTTCGTCCGCACCATGCTTCTGTAAGGTTGTACCGCAA < 3:194870/149‑1 ACCTGTGTAAGATGCGCGCCAAGCCCTTGTATCTAAAGGGTTTCGCGAATTGACCAAGCTCTGGCACCAGATTTAGGTTCCAGCGGCGCAAGCTGTAAGAGTTCGAGTCTCTTCGTCCGCACCATGCTTC < 1:14325/130‑1 ACCTGTGTAAGATGCGCGCCAAGCCCTTGTATCTAAAGGGTTTCGCGAATTGACCAAGCTCTGGCACCAGATTTAGGTTCCAGCGGCGCAAGCTGTAAGAGTTCGAGTCTCTTCGTCCGCACCATGCTTC > 2:14325/1‑130 ACCTGTGTAAGATGCGCGCCAAGCCCTTGTATCTAAAGGGTTTCGCGAATTGACCAAGCTCTGGCACCAGATTTAGGTTCCAGCGGCGCAAGCTGTAAGA > 7:161063/1‑100 ACCTGTGTAAGATGCGCGCCAAGCCCTTGTATCTAAAGGGTTTCGCGAATTGACCAAGCTCTGGCACCAGATTTAGGTTCCAGCGGCGCAAGCTGTAAGA < 8:161063/100‑1 TGCGGACGAAGAGACTCGAACTCTTACAGCTTGCGCCGCTGGAACCTAAATCTGGTGCCAGAGCTTGGTCAATTCGCGAAACCCTTTAGATACAAGGGCTTGGCGCGCATCTTACACAGGTGGGACACACTATGCAACGCTAAATTCGTGTCCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2626082‑2625928 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgtcccaCCTGTGTAAGATGCGCGCCAAGCCCTTGTATCTAAAGGGTTTCGCGAATTGACCAAGCTCTGGCACCAGATTTAGGTTCCAGCGGCGCAAGCTGTAAGAGTTCGAGTCTCTTCGTCCGCACCATGCTTCTGTAAGGTTGTACCGCAA > NC_002947/2625963‑2626109 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |