New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2658287	46 (0.850)	4 (0.080)	4/248	NT	8.1%	coding (514/981 nt)	PP_2330	hypothetical protein
	?	NC_002947	= 2658316	47 (0.910)					coding (485/981 nt)	PP_2330	hypothetical protein

TCCGGGTGCTTGCTGATGATGTTGTTCAGCCAGGTGCCGCGCAGGGTCACGCCGGTGGCCAGGTCGACACCCACACCGATGGCGCCCTGGTGCAGGTTGGCCTTGCCGCCGGACTGGCGGGTCGGCAGGCGCAGCATGGCCATTACCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2658139‑2658287 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taccggACATCCGCATCATCGTGCTGATGGGCTACCCGGTAATGGCCA  <  NC_002947/2658316‑2658275                                                                                                                                                                                                 TCCGGGTGCTTGCTGATGATGTTGTTCAGCCAGGTGCCGCGCAGGGTCACGCCGGTGGCCAGGTCGACACCCACACCGATGGCGCCCTGGTGCAGGTTGGCCTTGCCGCCGGACTGGCGGGTCGGCAGGCGCAGCATGGCCATTACCGG                                            <  4:154415/149‑1                   ATGTTGTTCAGCCAGGTGCCGCGCAGGGTCACGCCGGTGGCCAGGTCGACACCCACACCGATGGCGCCCTGGTGCAGGTTGGCCTTGCCGCCGGACTGGCGGGTCGGCAGGCGCAGCATGGCCATTACCGGACATCCGCATCATCGTGC                          >  5:288878/1‑149                                           AGGGTCACGCCGGTGGCCAGGTCGACACCCACACCGATGGCGCCCTGGTGCAGGTTGGCCTTGCCGCCGGACTGGCGGGTCGGCAGGCGCAGCATGGCCATTACCGGACATCCGCATCATCGTGCTGATGGGCTACCCGGTAATGGCCA  <  6:288878/149‑1                                                            CAGGTCGACACCCACACCGATGGCGCCCTGGTGCAGGTTGGCCTTGCCGCCGGACTGGCGGGTCGGCAGGCGCAGCATGGCCATTACCGGACATCCGCATCATCGTGCTGATGGGCTACCCGGTAATGG     >  1:58244/1‑129                                                            CAGGTCGACACCCACACCGATGGCGCCCTGGTGCAGGTTGGCCTTGCCGCCGGACTGGCGGGTCGGCAGGCGCAGCATGGCCATTACCGGACATCCGCATCATCGTGCTGATGGGCTACCCGGTAATGG     <  2:58244/129‑1                                                                                                                                                                                                 TCCGGGTGCTTGCTGATGATGTTGTTCAGCCAGGTGCCGCGCAGGGTCACGCCGGTGGCCAGGTCGACACCCACACCGATGGCGCCCTGGTGCAGGTTGGCCTTGCCGCCGGACTGGCGGGTCGGCAGGCGCAGCATGGCCATTACCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2658139‑2658287 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taccggACATCCGCATCATCGTGCTGATGGGCTACCCGGTAATGGCCA  <  NC_002947/2658316‑2658275

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.