New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2658287	46 (0.850)	4 (0.080)	4/248	NT	8.1%	coding (514/981 nt)	PP_2330	hypothetical protein
	?	NC_002947	= 2658316	47 (0.910)					coding (485/981 nt)	PP_2330	hypothetical protein

TCCGGGTGCTTGCTGATGATGTTGTTCAGCCAGGTGCCGCGCAGGGTCACGCCGGTGGCCAGGTCGACACCCACACCGATGGCGCCCTGGTGCAGGTTGGCCTTGCCGCCGGACTGGCGGGTCGGCAGGCGCAGCATGGCCATTACCGGGTAGCCCATCAGCACGATGATGCGGATGTCCGGTACACCTTCGTAGCTGATGCTCTTGAATATCTGGTCCGGGGTCACGCGGTACTCGATCAGCGCGCGGTCGCGGTGCCCGCCGAGGGAGTACAGCCCAGTGAGGATGCTGG  >  NC_002947/2658139‑2658430                                                                                                                                                     |                                                                                                                                                tCCGGGTGCTTGCTGATGATGTTGTTCAGCCAGGTGCCGCGCAGGGTCACGCCGGTGGCCAGGTCGACACCCACACCGATGGCGCCCTGGTGCAGGTTGGCCTTGCCGCCGGACTGGCGGGTCGGCAGGCGCAGCATGGCCATTACCGG                                                                                                                                                 <  4:154415‑M1/149‑1 (MQ=255)         cttgctGATGATGTTGTTCAGCCAGGTGCCGCGCAGGGTCACGCCGGTGGCCAGGTCGACACCCACACCGATGGCGCCCTGGTGCAGGTTGGCCTTGCCGCCGGACTGGCGGGTCGGCAGGCGCAGCATGGCCATTACCGGGTAGccc                                                                                                                                          <  2:83041/148‑1 (MQ=255)         cttgctGATGATGTTGTTCAGCCAGGTGCCGCGCAGGGTCACGCCGGTGGCCAGGTCGACACCCACACCGATGGCGCCCTGGTGCAGGTTGGCCTTGCCGCCGGACTGGCGGGTCGGCAGGCGCAGCATGGCCATTACCGGGTAGCCCa                                                                                                                                         >  8:247897/1‑149 (MQ=255)         cttgctGATGATGTTGTTCAGCCAGGTGCCGCGCAGGGTCACGCCGGTGGCCAGGTCGACACCCACACCGATGGCGCCCTGGTGCAGGTTGGCCTTGCCGCCGGACTGGCGGGTCGGCAGGCGCAGCATGGCCATTACCGGGTAGCCCa                                                                                                                                         >  3:279127/1‑149 (MQ=255)            gctGATGATGTTGTTCAGCCAGGTGCCGCGCAGGGTCACGCCGGTGGCCAGGTCGACACCCACACCGATGGCGCCCTGGTGCAGGTTGGCCTTGCCGCCGGACTGGCGGGTCGGCAGGCGCAGCATGGCCATTACCGGGTAGCCCATc                                                                                                                                       <  7:250782/148‑1 (MQ=255)               gatgatGTTGTTCAGCCAGGTGCCGCGCAGGGTCACGCCGGTGGCCAGGTCGACACCCACACCGATGGCGCCCTGGTGCAGGTTGGCCTTGCCGCCGGACTGGCGGGTCGGCAGGCGCAGCATGGCCATTACCGGGTAGCCCATCAGCa                                                                                                                                   >  7:288144/1‑149 (MQ=255)                  gatgTTGTTCAGCCAGGTGCCGCGCAGGGTCACGCCGGTGGCCAGGTCGACACCCACACCGATGGCGCCCTGGTGCAGGTTGGCCTTGCCGCCGGACTGGCGGGTCGGCAGGCGCAGCATGGCCATTACCGGGTAGCCCATCAGCACga                                                                                                                                >  5:296413/1‑149 (MQ=255)                   atgTTGTTCAGCCAGGTGCCGCGCAGGGTCACGCCGGTGGCCAGGTCGACACCCACACCGATGGCGCCCTGGTGCAGGTTGGCCTTGCCGCCGGACTGGCGGGTCGGCAGGCGCAGCATGGCCATTACCGGacatccgcatcatcgtgc                                                                                                                               >  5:288878‑M1/1‑131 (MQ=255)                   atgTTGTTCAGCCAGGTGCCGCGCAGGGTCACGCCGGTGGCCAGGTCGACACCCACACCGATGGCGCCCTGGTGCAGGTTGGCCTTGCCGCCGGACTGGCGGGTCGGCAGGCGCAGCATGGCCATTACCGGGTAGCCCATCAGCACga                                                                                                                                <  7:247897/148‑1 (MQ=255)                        gttCAGCCAGGTGCCGCGCAGGGTCACGCCGGTGGCCAGGTCGACACCCACACCGATGGCGCCCTGGTGCAGGTTGGCCTTGCCGCCGGACTGGCGGGTCGGCAGGCGCAGCATGGCCATTACCGGGTAGCCCATCAGCACGATGATGc                                                                                                                          >  4:225530/1‑149 (MQ=255)                                           aGGGTCACGCCGGTGGCCAGGTCGACACCCACACCGATGGCGCCCTGGTGCAGGTTGGCCTTGCCGCCGGACTGGCGGGTCGGCAGGCGCAGCATGGCCATTACCGGacatccgcatcatcgtgctgatgggctacccggtaatggcca                                                                                                       <  6:288878‑M1/149‑43 (MQ=255)                                                  cGCCGGTGGCCAGGTCGACACCCACACCGATGGCGCCCTGGTGCAGGTTGGCCTTGCCGCAGGACTGGCGGGTCGGCAGGCGCAGCATGGCCATTACCGGGTAGCCCATCAGCACGATGATGCGGATGTCCGGTACACCTTCGTAGCt                                                                                                 >  7:215185/1‑148 (MQ=255)                                                     cGGTGGCCAGGTCGACACCCACACCGATGGCGCCCTGGTGCAGGTTGGCCTTGCCGCCGGACTGGCGGGTCGGCAGGCGCAGCATGGCCATTACCGGGTAGCCCATCAGCACGATGATGCGGATGTCCGGTACACCTTCGTAGCTGATg                                                                                             <  3:225530/149‑1 (MQ=255)                                                     cGGTGGCCAGGTCGACACCCACACCGATGGCGCCCTGGTGCAGGTTGGCCTTGCCGCCGGACTGGCGGGTCGGCAGGCGCAGCATGGCCATTACCGGGTAGCCCATCAGCACGATGATGCGGATGTCCGGTACACCTTCGTAGCTGATg                                                                                             >  8:244354/1‑149 (MQ=255)                                                          gCCAGGTCGACACCCACTCGGATGGCGGGCTTGTGCAGGTTGGCCTTGCCGCGGGACTGGCGGGTCGGCAGGCGCAGCATGGCCATTTCCGGGTAGCCCATGAGCTATATGATGCGGATGTCAGGTACACCTTCGTAGCTGATGCTCtt                                                                                        <  7:4145/149‑1 (MQ=255)                                                           ccAGGTCGACACCCACACCGATGGCGCCCTGGTGCAGGTTGGCCTTGCCGCCGGACTGGCGGGTCGGCAGGCGCAGCATGGCCATTACGGGGTAGCCCATCAGCACGATGATGCgg                                                                                                                        <  8:68808/116‑1 (MQ=255)                                                           ccAGGTCGACACCCACACCGATGGCGCCCTGGTGCAGGTTGGCCTTGCCGCCGGACTGGCGGGTCGGCAGGCGCAGCATGGCCATTACCGGGTAGCCCATCAGCACGATGATGCgg                                                                                                                        >  7:68808/1‑116 (MQ=255)                                                            cAGGTCGACACCCACACCGATGGCGCCCTGGTGCAGGTTGGCCTTGCCGCCGGACTGGCGGGTCGGCAGGCGCAGCATGGCCATTACCGGacatccgcatcatcgtgctgatgggctacccggtaatgg                                                                                                          <  2:58244‑M1/129‑40 (MQ=255)                                                            cAGGTCGACACCCACACCGATGGCGCCCTGGTGCAGGTTGGCCTTGCCGCCGGACTGGCGGGTCGGCAGGCGCAGCATGGCCATTACCGGacatccgcatcatcgtgctgatgggctacccggtaatgg                                                                                                          >  1:58244‑M1/1‑90 (MQ=255)                                                            cAGGTCGACACCCACACCGATGGCGCCCTGGTGCAGGTTGGCCTTGCCGCCGGACTGGCGGGTCGGCAGGCGCAGCATGGCCATTACCGGGTAGCCCATCAGCACGATGATGCGGATGTCCGGTACACCTTCGTAGCTGATGCTCTTg                                                                                       >  7:19874/1‑148 (MQ=255)                                                            cAGGTCGACACCCACACCGATGGCGCCCTGGTGCAGGTTGGCCTTGCCGCCGGACTGGCGGGTCGGCAGGCGCAGCATGGCCATTACCGGGTAGCCCATCAGCACGATGATGCGGATGTCCGGTACACCTTCGTAGCTGATGCTCTTGa                                                                                      <  4:279127/149‑1 (MQ=255)                                                                  gACACCCACACCGATGGCGCCCTGGTGCAGGTTGGCCTTGCCGCCGGACTGGCGGGTCGGCAGGCGCAGCATGGCCATTACCGGGTAGCCCATCAGCACGATGATGCGGATGTCCGGTACACCTTCGTAGCTGATGCTCTTGAATATCt                                                                                <  8:19874/149‑1 (MQ=255)                                                                   acacCCACACCGATGGCGCCCTGGTGCAGGTTGGCCTTGCCGCCGGACTGGCGGGTCGGCAGGCGCAGCATGGCCATTACCGGGTAGCCCATCAGCACGATGATGCGGATGTCCGGTACACCTTCGTAGCTGATGCTCTTGAATATCTg                                                                               <  7:244354/149‑1 (MQ=255)                                                                       ccACACCGATGGCGCCCTGGTGCAGGTTGGCCTTGCCGCCGGACTGGCGGGTCGGCAGGCGCAGCATGGCCATTACCGGGTAGCCCATCAGCACGATGATGCGGATGTCCGGTACACCTTCGTAGCTGATGctc                                                                                          >  5:17610/1‑134 (MQ=255)                                                                       ccACACCGATGGCGCCCTGGTGCAGGTTGGCCTTGCCGCCGGACTGGCGGGTCGGCAGGCGCAGCATGGCCATTACCGGGTAGCCCATCAGCACGATGATGCGGATGTCCGGTACACCTTCGTAGCTGATGctc                                                                                          <  6:17610/134‑1 (MQ=255)                                                                       ccACACCGATGGCGCCCTGGTGCAGGTTGGCCTTGCCGCCGGACTGGCGGGTCGGCAGGCGCAGCATGGCCATTACCGGGTAGCCCATCAGCACGATGATGCGGATGTCCGGTACACCTTCGTAGCTGATGCTCTTGAATATCTGGt                                                                             <  7:163923/147‑1 (MQ=255)                                                                       ccACACCGATGGCGCCCTGGTGCAGGTTGGCCTTGCCGCCGGACTGGCGGGTCGGCAGGCGCAGCATGGCCATTACCGGGTAGCCCATCAGCACGATGATGCGGATGTCCGGTACACCTTCGTAGCTGATGCTCTTGAATATCTGGt                                                                             >  8:163923/1‑147 (MQ=255)                                                                       ccACACCGATGGCGCCCTGGTGCAGGTTGGCCTTGCCGCCGGACTGGCGGGTCGGCAGGCGCAGCATGGCCATTACCGGGTAGCCCATCAGCACGATGATGCGGATGTCCGGTACACCTTCGTAGCTGATGCTCTTGAATATCTGGTcc                                                                           >  1:112969/1‑149 (MQ=255)                                                                        cacaCCGATGGCGCCCTGGTGCAGGTTGGCCTTGCCGCCGGACTGGCGGGTCGGCAGGCGCAGCATGGCCATTACCGGGTAGCCCATCAGCACGATGATGCGGATGTCCGGTACACCTTCGTAGCTGATGctct                                                                                         >  4:103233/1‑134 (MQ=255)                                                                        cacaCCGATGGCGCCCTGGTGCAGGTTGGCCTTGCCGCCGGACTGGCGGGTCGGCAGGCGCAGCATGGCCATTACCGGGTAGCCCATCAGCACGATGATGCGGATGTCCGGTACACCTTCGTAGCTGATGctct                                                                                         <  3:103233/134‑1 (MQ=255)                                                                        cacaCCGATGGCGCCCTGGTGCAGGTTGGCCTTGCCGCCGGACTGGCGGGTCGGCAGGCGCAGCATGGCCATTACCGGGTAGCCCATCAGCACGATGATGCGGATGTCCGGTACACCTTCGTAGCTGATGCTCTTGAATATCTGGTCCg                                                                          <  6:296413/149‑1 (MQ=255)                                                                        cacaCCGATGGCGCCCTGGTGCAGGTTGGCCTTGCCGCCGGACTGGCGGGTCGGCAGGCGCAGCATGGCCATTACCGGGTAGCCCATCAGCACGATGATGCGGATGTCCGGTACACCTTCGTAGCTGATGCTCTTGAATATCTGGTCCg                                                                          <  8:288144/149‑1 (MQ=255)                                                                         acacCGATGGCGCCCTGGTGCAGGTTGGCCTTGCCGCCGGACTGGCGGGTCGGCAGGCGCAGCATGGCCATTACCGGGTAGCCCATCAGCACGATGATGCGGATGTCCGGTACACCTTCGTAGCTGATGCTCTTGAATATCTGGTCCgg                                                                         <  2:112969/149‑1 (MQ=255)                                                                           acCGATGGCGCCCTGGTGCAGGTTGGCCTTGCCGCCGGACTGGCGGGTCGGCAGGCGCAGCATGGCCATTACCGGGTAGCCCATCAGCACGATGTTGCGGATGTCCGGTACACCTTCGTAGCTGATGCTCTTGAATATCTGGTCCgggg                                                                       >  5:186568/1‑149 (MQ=255)                                                                             cGATGGCGCCCTGGTGCCGGTTGGCCTTGCCGCCGGACTGGCGGGTCGGCAGGCGCAGCATGGCCATTACCGGGTAGCCCATCAGCACGATGATGCGGATGTCCGGTACACCTTCGTAGCTGATGCTCTTGAATATCTGGTCCGGGGt                                                                      >  6:279030/1‑148 (MQ=255)                                                                                     cccTGGTGCAGGTTGGCCTTGCCGCCGGACTGGCGGGTCGGCAGGCGCAGCATGGCCATTACCGGGTAGCCCATCAGCACGATGATGCGGATGTCCGGTACACCTTCGTAGCTGATGCTCTTGAATATCTGGTCCGGGGTCACGCGGTa                                                             <  2:182861/149‑1 (MQ=255)                                                                                          gTGCAGGTTGGCCTTGCCGCCGGACTGGCGGGTCGTCATGCGCAGCATGGCCATTACC‑GGTAGCCCTTCAGCACGATGATGCGGTTGTCCGGTACACCTTCGTAGCTGATGCTCTTGAATATCTGGGCCGGGGTCACGCGGTACTCGa                                                        <  6:248559/148‑1 (MQ=255)                                                                                                gTTGGCCTTGCCGCCGGACTGGCGGGTCGGCAGGCGCAGCATGGCCATTACCGGGTAGCCCATCAGCACGATGATGCGGATGTCCGGTACACCTTCGTAGCTGATGCTCTTGAATATCTGGTCCGGGGTCACGCGGTACTCGATCAgcg                                                  >  2:116331/1‑149 (MQ=255)                                                                                                     ccTTGCCGCCGGACTGGCGGGTCGGCAGGCGCAGCATGGCCATTACCGGGTAGCCCATCAGCACGATGATGCGGATGTCCGGTACACCTTCGTAGCTGATGCTCTTGAATATCTGGTCCGGGGTCACGCGGTACTCGATCAGCGcgcgg                                             >  5:321395/1‑149 (MQ=255)                                                                                                        tGCCGCCGGACTGGCGGGTCGGCAGGCGCAGCATGGCCATTACCGGGTAGCCCATCAGGACGATGATGCGGATGTCCGGTACGCCTTCGTTGCTGATGCTCTTGAATATCTGGTCCGGGGTCCGGCGGTACTCGATCAGCGcgcggtcg                                          >  1:343709/1‑149 (MQ=255)                                                                                                             ccgGACTGGCGGGTCGGCAGGCGCAGCATGGCCATTACCGGGTAGCCCATCAGCACGATGATGCGGATGTCCGGTACACCTTCGTAGCTGATGCTCTTGAATATCTGGTCCGGGGTCACGCGGTACTCGATCAGCGCGCGGTCGCGGTg                                     >  2:26102/1‑149 (MQ=255)                                                                                                                  cTGGCGGGTCGGCAGGCGCAGCATGGCCATTACCGGGTAGCCCATCAGCACGATGATGCGGATGTCCGGTACACCTTCCTAGCTGATGCTCTTGAATATCTGGTCCGGGGTCACGCGGTACTCGATCAGCGCGCGGTCGCGGTGCccgc                                >  2:39176/1‑149 (MQ=255)                                                                                                                   tGGCGGGTCGGCAGGCGCAGCATGGCCATTACCGGGTAGCCCATCAGCACGATGATGCGGATGTCCGGTACACCTTCGTAGCTGATGCTCTTGAATATCTGGTCCGGGGTCACGCGGTACTCGATCAGCGCGCGGTCGCGGTGCccgcc                               >  7:92512/1‑149 (MQ=255)                                                                                                                     gCGGGTCGGCAGGCGCAGCATGGCCATTACCGGGTAGCCCATCAGCACGATGATGCGGATGTCCGGTACACCTTCGTAGCTGATGCTCTTGAATATCTGGTCCGGGGTCACGCGGTACTCGATCAGCGCGCGGTCGCGGTGCccgccg                              <  1:39176/148‑1 (MQ=255)                                                                                                                         gTCGGCAGGCGCAGCATGGCCATTACCGGGTAGCCCATCAGCACGATGATGCGGATGTCCGGTACACCTTCGTAGCTGATGCTCTTGAATATCTGGTCCGGGGTCACGCGGTACTCGATCAGCGCGCGGTCGCGGTGCCCGCCGAgg                           >  1:46284/1‑147 (MQ=255)                                                                                                                              cAGGCGCAGCATGGCCATTACCGGGTAGCCCATCAGCACGATGATGCGGATGTCCGGTACACCTTCGTAGCTGATGCTCTTGAATATCTGGTCCGGGGTCACGCGGTACTCGATCAGCGCGCGGTCGCGGTGCCCGCCGAGGGAGTACa                    <  1:116331/149‑1 (MQ=255)                                                                                                                                  cgcAGCATGGCCATTACCGGGTAGCCCATCAGCACGATGATGCGGATGTCCGGTACACCTTCGTAGCTGATGCTCTTGAATATCTGGTCCGGGGTCACGCGGTACt                                                           <  8:91434/106‑1 (MQ=255)                                                                                                                                        aTGGCCATTACCGGGTAGCCCATCAGCACGATGATGCGGATGTCCGGTACACCTTCGTAGCTGATGCTCTTGAATATCTGGTCCGGGGTCACGCGGTACTCGATCAGCGCGCGGTCGCGGTGCCCGCCGAGGGAGTACAGCCCAGTGAg          >  3:225619/1‑149 (MQ=255)                                                                                                                                         tGGCCATTACCGGGTAGCCCATCAGCACGATGATGCGGATGTccggtaatggccatgctgcgcctgccgacccgccagtccggcggcaaggccaacctgcaccagggcgccatcggtgtgggtgtcgacctggccaccggcgtgaccct         <  6:288878‑M2/149‑108 (MQ=255)                                                                                                                                            ccATTACCGGGTAGCCCATCAGCACGATGATGCGGATGTccggtaatggccatgctgcgcctgccgacccgccagtccggcggcaaggccaacctgcaccagggcgccatcggtgtgggtgtcgacctg                          <  2:58244‑M2/129‑91 (MQ=255)                                                                                                                                            ccATTACCGGGTAGCCCATCAGCACGATGATGCGGATGTccggtaatggccatgctgcgcctgccgacccgccagtccggcggcaaggccaacctgcaccagggcgccatcggtgtgggtgtcgacctg                          >  1:58244‑M2/1‑39 (MQ=255)                                                                                                                                             cATTACCGGGTAGCCCATCAGCACGATGATGCGGATGTCCGGTACACCTTCGTAGCTTATGCTCTTGAATATCTGGTCCGGGGTCACGCGGTACTCGATCAGCGCGCGGTCGCGGTGCCCGCCGAGGGAGTACAGCCCAGTGAGGATGc     >  7:124301/1‑149 (MQ=255)                                                                                                                                              aTTACCGGGTAGCCCATCAGCACGATGATGCGGATGTCCGGTGCACCTTCGTAGCTGATGCTCTTGAATATCTGGTCCGGGGTCACGCGGTACTCGATCAGCGCGCGGTCGCGGTGCCCGCCGAGGGAGTTCAGCCCAGTGAGGATGCt    >  3:60307/1‑149 (MQ=255)                                                                                                                                               ttACCGGGTAGCCCATCAGCACGATGATGCGGATGTCCGGTACACCTTCGTAGCTGATGCTCTTGAATATCTGGTCCGGGGTCACGCGGTACTCGATCAGCGCGCGGTCGCGGTGCCCGCCGAGGGAGTACAGCCCAGTGAGGATGCTg   <  5:279030/149‑1 (MQ=255)                                                                                                                                                 aCCGGGTAGCCCATCAGCACGATGATGCGGATGTCCGGTACACCTTCGTAGCTGATGCTCTTGAATATCTGGTCCGGGGTCACGCGGTACTCGATCAGCGCGCGGTCGCGGTGCCCGCCGAGGGAGTACAGCCCAGTGAGGATGCTgg  <  8:92512/148‑1 (MQ=255)                                                                                                                                                    gggTAGCCCATCAGCACGATGATGCGGATGTCCGGTACACCTTCGTAGCTGATGCTCTTGAATATCTGGTCCGGGGTCACGCGGTACTCGATCAGCGCGCGGTCGCGGTGCCCGCCGAGGGa                         >  4:300447/1‑122 (MQ=255)                                                                                                                                                    gggTAGCCCATCAGCACGATGATGCGGATGTCCGGTACACCTTCGTAGCTGATGCTCTTGAATATCTGGTCCGGGGTCACGCGGTACTCGATCAGCGCGCGGTCGCGGTGCCCGCCGAGGGa                         <  3:300447/122‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                TCCGGGTGCTTGCTGATGATGTTGTTCAGCCAGGTGCCGCGCAGGGTCACGCCGGTGGCCAGGTCGACACCCACACCGATGGCGCCCTGGTGCAGGTTGGCCTTGCCGCCGGACTGGCGGGTCGGCAGGCGCAGCATGGCCATTACCGGGTAGCCCATCAGCACGATGATGCGGATGTCCGGTACACCTTCGTAGCTGATGCTCTTGAATATCTGGTCCGGGGTCACGCGGTACTCGATCAGCGCGCGGTCGCGGTGCCCGCCGAGGGAGTACAGCCCAGTGAGGATGCTGG  >  NC_002947/2658139‑2658430

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.