| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2855059 = | 39 (0.720) | 3 (0.060) | 3/250 | NT | 7.8% | intergenic (+109/+63) | PP_2507/PP_5532 | short‑chain dehydrogenase/reductase family oxidoreductase/hypothetical protein |
| ? | NC_002947 | 2855106 = | 33 (0.630) | intergenic (+156/+16) | PP_2507/PP_5532 | short‑chain dehydrogenase/reductase family oxidoreductase/hypothetical protein | |||||
GACAAACCTCAGTTGATCTGGGCTTCGCACTACCTTTGCACGTTAGCCAAGGCACTGATGGATGATGCTGAACTGGGCATGATGCGCTGAATGACTCATCATCGACTGGGTGCCTTCAAGACCTATGCGTCTCCCGATTTTGAAGGCGACCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2855211‑2855059‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acccaGTCGATGATGAGTCATTCAGCGCATCATGCCCAGTTCAGCATCATCCATCAGTGCCTTGGCTAACGTGCAAAGGTAGTGCGAAGCCCAGATCAACTGAGGTTTGTCCTCCATCAATCCATCCAGAGTCATGTCCCGTGCATAGCCCAT > NC_002947/2855106‑2855253 gtCAAACCTCAGTTGATCTTGGCTTCGCACTACCTTTGCAAGTTAGCCAAGGCACTGATGGATGATGCTTAACTGGGCATGATGCGCTGAATGACTCATCATCGACTGGGTGCCTTCAAGACCTATGCGTCTCCCGATTTTGAAGGCGA < 8:120958/147‑1GACAAACCTCAGTTGATCTGGGCTTCGCACTACCTTTGCACGTTAGCCAAGGCACTGATGGATGATGCTGAACTGGGCATGATGCGCTGAATGACTCATCATCGACTGGGTGCCTTCAAGACCTATGCGTCTCCCGATTTTGAAGGCGA > 4:99588/1‑149 ACAAACCTCAGTTGATCTGGGCTTCGCACTACCTTTGCACGTTAGCCAAGGCACTGATGGATGATGCTGAACTGGGCATGATGCGCTGAATGACTCATCATCGACTGGGTGCCTTCAAGACCTATGCGTCTCCCGATTTTGAAGGCGAC < 6:306350/149‑1 ATCGACTGGGTGCCTTCAAGACCTATGCGTCTCCCGATTTTGAAGGCGACCCAGTCGATGATGAGTCATTCAGCGCATCATGCCGAGTTCAGCATCATCCATCAGTGCCTTGGCTAACGTGCAAAGGTAGTGCGAAGCCCAGATCAACT > 3:314583/1‑149 ATCGACTGGGTGCCTTCAAGACCTATGCGTCTCCCGATTTTGAAGGCGACCCAGTCGATGATGAGTCATTCAGCGCATCATGCCCAGTTCAGCATCATCCATCAGTGCCTTGGCTAACGTGCAAAGGTAGTGCGAAGCCCAGATCAAC < 4:314583/148‑1 GACTGGGTGCCTTCAAGACCTATGCGTCTCCCGATTTTGAAGGCGACCCAGTCGATGATGAGTCATTCAGCGCATCATGCCCAGTTCAGCATCATCCATCAGTGCCTTGGCTAACGTGCAAAGGTAGTGCGAAGCCCAGATCAACTGAG > 6:341052/1‑149 CCCAGTCGATGATGAGTCATTCAGCGCATCATGCCCAGTTCAGCATCATCCATCAGTGCCTTGGCTAACGTGCAAAGGTAGTGCGAAGCCCAGATCAACTGAGGTTTGTCCTCCATCAATCCATCCAGAGTCATGTCCCGTGCATAGCC > 4:137001/1‑149 CCAGTCGATGATGAGTCATTCAGCGCATCATGCCCAGTTCAGCATCATCCATCAGTGCCTTGGCTAACGTGCAAAGGTAGTGCGAAGCCCAGATCAACTGAGGTTTGTCCTCCATCAATCCATCCAGAGTCATGTCCCGTGCATAGCC > 3:164051/1‑148 CAGTCGATGATGAGTCATTCAGCGCATCATGCCCAGTTCAGCATCATCCATCAGTGCCTTGGCTAACGTGCAAAGGTAGTGAGAAGCCCAGATCAACTGAGTTTTGTCATCCATCAATCCATCCAGAGTCATGTCCCGTGCAAAGCCCA > 3:301929/1‑149 AGTCGATGATGAGTCATTCAGCGCATCATGCCCAGTTCAGCATCATCCATCAGTGCCTTGGCTAACGTGCAAAGGTAGTGCGAAGCCCAGATCAACTGAGGTTTGTCCTCCATCAATCCATCCAGAGTCATGTCCCGTGCATAGCCCAT < 2:320791/149‑1 GACAAACCTCAGTTGATCTGGGCTTCGCACTACCTTTGCACGTTAGCCAAGGCACTGATGGATGATGCTGAACTGGGCATGATGCGCTGAATGACTCATCATCGACTGGGTGCCTTCAAGACCTATGCGTCTCCCGATTTTGAAGGCGACCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2855211‑2855059‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acccaGTCGATGATGAGTCATTCAGCGCATCATGCCCAGTTCAGCATCATCCATCAGTGCCTTGGCTAACGTGCAAAGGTAGTGCGAAGCCCAGATCAACTGAGGTTTGTCCTCCATCAATCCATCCAGAGTCATGTCCCGTGCATAGCCCAT > NC_002947/2855106‑2855253 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |