| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2855059 = | 39 (0.720) | 3 (0.060) | 3/250 | NT | 7.8% | intergenic (+109/+63) | PP_2507/PP_5532 | short‑chain dehydrogenase/reductase family oxidoreductase/hypothetical protein |
| ? | NC_002947 | 2855106 = | 33 (0.630) | intergenic (+156/+16) | PP_2507/PP_5532 | short‑chain dehydrogenase/reductase family oxidoreductase/hypothetical protein | |||||
GGAGCTGATCTTGCCGGCCATCGGTGATGAGCGCTTCTGAGGCCAAAGCACCGGAGCCTTTGCGTGAGGGTTCGGCTTTGATGTCTCAGTCGATGGAACTGAATCTTGGACCGCGTCCAGCGAGAAAAGAGGCAAGGGGCTAGGTCGTTGGGTCGCCTTCAAAATCGGGAGACGCATAGGTCTTGAAGGCACCCAGTCGATGATGAGTCATTCAGCGCATCATGCCCAGTTCAGCATCATCCATCAGTGCCTTGGCTAACGTGCAAAGGTAGTGCGAAGCCCAGATCAACTGA > NC_002947/2854911‑2855203 | atgggctatgcacgggacatgactctggatggattgatggaggacaaacctcagttgatctgggcttcgcactacctttgcacgttagccaaggcactgatggatgatgctgaactgggcatgatgcgctgaatgactcatcatcgact < 2:320791‑M1/1‑1 (MQ=255) tgggctttgcacgggacatgactctggatggattgatggatgacaaaactcagttgatctgggcttctcactacctttgcacgttagccaaggcactgatggatgatgctgaactgggcatgatgcgctgaatgactcatcatcgacTg > 3:301929‑M1/148‑149 (MQ=255) gAGCTGATCTTGCCGGCCATCGGTGATGAGCGCTTCTGAGGCCAAAGCACCGGAGCCTTTGCGTGAGGGTTCGGCTTTGATGTCTCAGTCGATGGAACTGAATCTTGGACAGCGTCCAGCGAGAAAAGAGGCAAGGGGCTAGGTCGTTg > 2:305148/1‑149 (MQ=255) ggctatgcacgggacatgactctggatggattgatggaggacaaacctcagttgatctgggcttcgcactacctttgcacgttagccaaggcactgatggatgatgctgaactgggcatgatgcgctgaatgactcatcatcgacTggg > 4:137001‑M1/146‑149 (MQ=255) ggctatgcacgggacatgactctggatggattgatggaggacaaacctcagttgatctgggcttcgcactacctttgcacgttagccaaggcactgatggatgatgctgaactgggcatgatgcgctgaatgactcatcatcgacTgg > 3:164051‑M1/146‑148 (MQ=255) ccGGCCATCGGTGATGAGCGCTTCTGAGGCCAAAGCACCGGAGCCTTTGCGTGAGGGTTCGGCTTTGATGTCTCAGTCGATGGAACTGAATCTTGGACCGCGTCCAGCGAGAAAAGAGGCAAGGGGCTAGGTCGTTGGGTCGCCTTCa > 3:99588/1‑148 (MQ=255) gaGCGCTTCTGAGGCCAAAGCACCGTAGCCTTTGCGTGAGGGTTCGGCTTTGATGTCTCAGTCGATGGAACTGAATATTGGAACGCGTCCAGCGAGAAAAGCGGCAAGGGGCTAGGTCGTTGGGTCGACTTCAAAAACGGGAGACGCa > 2:110405/1‑148 (MQ=255) gcgcTTCTGAGGCCAAAGCACCGGAGCCTTTGCGTGAGGGTTCGGCTTTGATGTCTCAGTCGATGGAACTGAATCTTGGACCGCGTCCAGCGAGAAAAGAGGCAAGGGGCTAGGTCGTTGGGTCGCCTTCAAAATCGGGAGACGCATa < 3:186094/148‑1 (MQ=255) gcgcTTCTGAGGCCAAAGCACCGGAGCCTTTGCGTGAGGGTTCGGCTTTGATGTCTCAGTCGATGGAACTGAATCTTGGACCGCGTCCAGCGAGAAAAGAGGCAAGGGGCTAGGTCGTTGGGTCGCCTTCAAAATCGGGAGACGCATAg > 8:210136/1‑149 (MQ=255) cgcTTCTGAGGCCAAATCACCGGAGCCTTTGCGTGAGGGTTCGGCTTTGATGTCTCAGTCGATGGAACTGAATCTTGGACCGCGTCCAGCGAGAAAAGAGGCAAGGGGCTAGGTCGTTGGGTCGCCTTCAAAATCGGGAGACGCATAgg < 1:110405/149‑1 (MQ=255) cgcTTCTGAGGCCAAAGCACCGGAGCCTTTGCGTGAGGGTTCGGCTTTGATGTCTCAGTCGATGGAACTGAATCTTGGACCGCGTCCAGCGAGAAAAGAGGCAAGGGGCTAGGTCGTTGGGTCGCCTTCAAAATCGGGAGACGCATAgg > 3:150807/1‑149 (MQ=255) gcTTCTGAGGCCAAAGCACCGGAGCCTTTGCGTGAGGGTTCGGCTTTGATGTCTCAGTCGATGGAACTGAATCTTGGACCGCGTCCAGCGAGAAAAGAGGCAAGGGGCTAGGTCGTTGGGTCGCCTTCAAAATCGGGAGACGCATAGGt < 1:231746/149‑1 (MQ=255) ttCTGAGGCCAAAGCACCGGAGCCTTTGGGTGAGGGTTCGGCTTTGATGTCTCAGTCGATGGAACTGAATCTTGGACCGCGTCCAGCGAGAAAAGAGGCAAGGGGCTAGGTCGTTGGGTCGCCTTCAAAATCGGGAGACGCATAGGTCt > 1:192088/1‑149 (MQ=255) ttCTGAGGCCAAAGCACCGGAGCCTTTGCGTGTGGGTTCGGCTTTGATGTCTCAGTCGATGGAACTGAATCTTGGACCGCGTCCAGCGAGAAAAGAGGCAAGGGGCTAGGTCGTTGGGTCGCCTTCAAAATCGGGAGACGCATAGGTCt < 1:305148/149‑1 (MQ=255) aGGCCAAAGCACCGGAGCCTTTGCGTGAGGGTTCGGCTTTGATGTCTCAGTCGATGGAACTGAATCTTGGACCGCGTCCAGCGAGAAAAGAGGCAAGGGGCTAGGTCGTTGGGTCGCCTTCAAAATCGGGAGACGCATAg > 2:303102/1‑140 (MQ=255) aGGCCAAAGCACCGGAGCCTTTGCGTGAGGGTTCGGCTTTGATGTCTCAGTCGATGGAACTGAATCTTGGACCGCGTCCAGCGAGAAAAGAGGCAAGGGGCTAGGTCGTTGGGTCGCCTTCAAAATCGGGAGACGCATAg < 1:303102/140‑1 (MQ=255) aGGCCAAAGCACCGGAGCCTTTGCGTGAGGGTTCGGCTTTGATGTCTCAGTCGATGGAACTGAATCTTGGACCGCGTCCAGCGAGAAAAGAGGCAAGGGGCTAGGTCGTTGGGTCGCCTTCAAAATCGGGAGACGCATAGGTCTTGaa < 3:316124/148‑1 (MQ=255) aGGCCAAAGCACCGGAGCCTTTGCGTGAGGGTTCGGCTTTGATGTCTCAGTCGAAGGAACTGAATCTTGGACCGCGTCCAGCGAGAAAAGAGGCAAGGGGCTAGGTCGTTGGGTCGCCTTCAAAATCGGGAGACGCATAGGTCTTg < 3:252972/146‑1 (MQ=255) aaaGCACCGGAGCCTTTGCGTGAGGGTTCGGCTTTGATGTCTCAGTCGATGGATCTTTTTCTTGGACGTGGTTCAGCGAGAAAAGAGGCAAGGGGCTAGGTCGTTGGGTCGCCTTCAAAATCGGGAGACGCATAGGTCTTGAAGGCAcc < 1:284406/149‑1 (MQ=255) aaaGCACCGGAGCCTTTGCGTGAGGGTTCGGCTTTGATGTCTCAGTCGATGGAACTGAATCTTGGACCGCGTCCAGCGAGAAAAGAGGCAAGGGGCTAGGTCGTTGGGTCGCCTTCAAAATCGGGAGACGCATAGGTCTTGAAGGCAcc > 7:115389/1‑149 (MQ=255) aaaGCACCGGAGCCTTTGCGTGAGGGTTCGGCTTTGATGTCTCAGTCGATGGAACTGAATCTTGGACCGCGTCCAGCGAGAAAAGAGGCAAGGGGCTAGGTCGTTGGGTCGCCTTCAAAATCGGGAGACGCATAGGTCTTGAAGGCAcc > 2:308532/1‑149 (MQ=255) ctcagttgatctgggcttcgcactacctttgcacgttagccaaggcactgatggatgatgctgaactgggcatgatgcgctgaatgactcatcatcgacTGGGTCGCCTTCAAAATCGGGAGACGCATAGGTCTTGAAGGCACCCAGTc > 6:341052‑M1/100‑149 (MQ=255) aggAGACTTTGCGTGAGGGTTCGGCTTTGATGTCTCAGTCGATGGAACTGAATCTTGGACCGCGTCCAGCGAGAAAAGAGGCAAGGGGCTAGGTCGTTGGGTCGCCTTCAAAATCGGGAGACGCATAGGTCTTGAAGGCACCCAGTCga < 8:277269/148‑1 (MQ=255) agttgatctgggcttcgcactacctttgcacgttagccaaggcactgatggatgatgctgaactcggcatgatgcgctgaatgactcatcatcgacTGGGTCGCCTTCAAAATCGGGAGACGCATAGGTCTTGAAGGCACCCAGTCgat > 3:314583‑M1/97‑149 (MQ=255) gttgatctgggcttcgcactacctttgcacgttagccaaggcactgatggatgatgctgaactgggcatgatgcgctgaatgactcatcatcgacTGGGTCGCCTTCAAAATCGGGAGACGCATAGGTCTTGAAGGCACCCAGTCgat < 4:314583‑M1/53‑1 (MQ=255) cTTTGCGTGAGGGTTCGGCTTTGATGTCTCAGTCGATGGAACTGAATCTTGGACCGCGTCCAGCGAGAAAAGAGGCAAGGGGCTAGGTCGTTGGGTCGCCTTCAAAATCGGGAGACGCATAGGTCTTGAAGGCACCCAGTCGAtgatga < 8:280413/149‑1 (MQ=255) cTTTGCGTGAGGGTTCGGCTTTGATGTCTCAGTCGATGGAACTGAATCTTGGACCGCGTCCAGCGAGAAAAGAGGCAAGGGGCTAGGTCGTTGGGTCGCCTTCAAAATCGGGAGACGCATAGGTCTTGAAGGCACCCAGTCGAtgatga < 2:192088/149‑1 (MQ=255) cTTTGAGTGATGGTTCGGCTTTGATGGCTAAGTCGATGGAACTGAATCTTGGACCGCGTCCAGCGAGAAAAGAGGCAAGGGGCTAGGTCGTTGGGTCGCCTTCAAAATCGGGAGACGCATAGGTCTTGAAGGCACCCAGTCGAtgatga < 7:137739/149‑1 (MQ=255) tctcAGTCGATGGAACTGAATCTTGGACCGCGTCCAGCGAGAAAAGAGGCAAGGGGCTAGGTCGTTGGGTCGCCTTCAAAATCGGGAGACGCATAGGTCTTGAAGGCACCCAGTCGATGATGAGTCATTCAGCGCATCATGCCCAGtt > 3:308334/1‑148 (MQ=255) aCTGAATCTTGGACCGCGTCCAGCGAGAAAAGAGGCAAGGGGCTAGGTCGTTGGGTCGCCTTCAAAATCGGGAGACGCATAGGTCTTGAAGGCACCCAGTCGATGATGAGTCATTCAGCGCATCATGACCAGTTCAGCATcatccat > 2:111033/1‑147 (MQ=255) gAATCTTGGACCGCGTCCAGCGAGAAAAGAGGCAAGGGGCTAGGTCGTTGGGTCGCCTTCAAAATCGGGAGACGCATAGGTCTTGAAGGCACCCAGTCGATGATGAGTCATTCAGCGCATCATGCCCAGTTCAGcatcat < 1:242929/140‑1 (MQ=255) gAATCTTGGACCGCGTCCAGCGAGAAAAGAGGCAAGGGGCTAGGTCGTTGGGTCGCCTTCAAAATCGGGAGACGCATAGGTCTTGAAGGCACCCAGTCGATGATGAGTCATTCAGCGCATCATGCCCAGTTCAGcatcat > 2:242929/1‑140 (MQ=255) aaTCTTGGACCGCGTCCAGCGAGAAAAGAGGCAAGGGGCTAGGTCGTTGGGTCGCCTTCAAAATCGGGAGACGCATAGGTCTTGAAGGCACCCAGTCGATGATGAGTCATTCa < 8:132250/113‑1 (MQ=255) aaTCTTGGACCGCGTCCAGCGAGAAAAGAGGCAAGGGGCTAGGTCGTTGGGTCGCCTTCAAAATCGGGAGACGCATAGGTCTTGAAGGCACCCAGTCGATGATGAGTCATTCa > 7:132250/1‑113 (MQ=255) aaTCTTGGACCGCGTCCAGCGAGAAAAGAGGCAAGGGGCTAGGTCGTTGGGTCGCCTTCAAAATCGGGAGACGCATAGGTCTTGAAGGCACCCAGTCGATGATGAGTCATTCAGCGCATCATGCCCAGTTCAGCATCATCCATCAGTGc > 2:256150/1‑149 (MQ=255) gTCCAGCGAGAAAAGAGGCAAGGGGCTAGGTCGTTGGGTCGCCTTCAAAATCGGGAGACGCATAGGTCTTGAAGGCACCCAGTCGATGATGAGTCATTCAGCGCATCATGCCCAGTTCAGCATCATCCATCAGTGCCTTGGCTAACGTg < 4:150807/149‑1 (MQ=255) aGCGAGAAAAGAGGCAAGGGGCTAGGTCGTTGGGTCGCCTTCAAAATCGGGAGACGCATAGGTCTTGAAGGCACCCAGTCGATGATGAGTCATTCAGCGCATCATGCCCAGTTCAGCATCATCCATCAGTGCCTTGGCTAACGTGCa > 4:284117/1‑147 (MQ=255) gCGAGAAAAGAGGCAAGGGGCTAGGTCGTTGGGTCGCCTTCAAAATCGGGAGACGCATAGGTCTTGAAGGCACCCAGTCGATGATGAGTCATTCAGCGCATCATGCCCAGTTCAGCATCATCCATCAGTGCCTTgg > 4:112608/1‑136 (MQ=255) gCGAGAAAAGAGGCAAGGGGCTAGGTCGTTGGGTCGCCTTCAAAATCGGGAGACGCATAGGTCTTGAAGGCACCCAGTCGATGATGAGTCATTCAGCGCATCATGCCCAGTTCAGCATCATCCATCAGTGCCTTgg < 3:112608/136‑1 (MQ=255) gagaAAAGAGGCAAGGGGCTAGGTCGTTGGGTCGCCTTCAAAATCGGGAGACGCATAGGTCTTGAAGGCACCCAGTCGATGATGAGTCATTCAGCGCATCATGCCCAGTTCAGCATCATCCATTAGTGCCTTGGCTAACGTGCAAAgg < 7:210136/148‑1 (MQ=255) aaaaGAGGCAAGGGGCTAGGTCGTTGGGTCGCCTTCAAAATCGGGAGACGCATAGGTCTTGAAGGCACCCAGTCGATGATGAGTCATTCAGCGCATCATGCCCAGTTCAGCATCATCCATCAGTGCCTTGGCTAACGTGCAAAGGTAGt < 4:308334/149‑1 (MQ=255) aaaGAGGCAAGGGGCTAGGTCGTTGGGTCGCCTTCAAAATCGGGAGACGCATAGGTCTTGAAGGCACCCAGTCGATGATGAGTCATTCAGCGCATCATGCCCAGTTCAGCATCATCCATCAGTGCCTTGGCTAACGTGCAAAGGTAGTg < 3:284117/149‑1 (MQ=255) aaGAGGCAAGGGGCTAGGTCGTTGGGTCGCCTTCAAAATCGGGAGACGCATAGGTCTTGAAGGCACCCAGTCGATGATGAGTCATTCAGCGCATCATGCCCAGTTAAGCATCATCCCTCAGTGCCTTGGCTAACGTGCAAAGGTAGTGc > 3:201408/1‑149 (MQ=255) gCTAGGTCGTTGGGTCGCCTTCAAAATCGGGAGACGCATAGGTCTTGAAGGCACCCAGTCGATGATGAGTCATTCAGCGCATCATGCCCAGTTCAGCATCATCCATCAGTGCCTTGGCTAACGTGCaaa < 8:307639/129‑1 (MQ=255) gCTAGGTCGTTGGGTCGCCTTCAAAATCGGGAGACGCATAGGTCTTGAAGGCACCCAGTCGATGATGAGTCATTCAGCGCATCATGCCCAGTTCAGCATCATCCATCAGTGCCTTGGCTAACGTGCaaa > 7:307639/1‑129 (MQ=255) gCTAGGTCGTTGGGTCGCCTTCAAAATCGGGAGACGCATAGGTCTTGAAGGCACCCAGTCGATGATGAGTCATTCAGCGCATCATGCCCAGTTCAGCATCATCCATCAGTGCCTCGGCTAACGTGCAAAGGTAGTGCGAAGCCCAGAt > 6:1805/1‑148 (MQ=255) ggTCGTTGGGGCGCCTTCAAAATCGGGAGACGCATAGGTCTTGAAGGCACCCAGTCGATGATGAGTCATTCAGCGCATCATGCCCAGTTCAGCATCATCCATCAGTGCCTTGGCTAACGTGCAAAGGTAGTGCGAAGCCCAGATCAAc < 2:109320/148‑1 (MQ=255) gTCGTTAGGTCGCCTTCAAAATCGGGAGACGCATAGGTCTTGAAGGCACCCAGTCGATGATGAGTCATTCAGCGCATCATGCCCAGTTCAGCATCATCCATCAGTGCCTTGGCTAACGTGCAAAGGTAGTg > 2:142904/1‑131 (MQ=255) gTCGTTAGGTCGCCTTCAAAATCGGGAGACGCATAGGTCTTGAAGGCACCCAGTCGATGATGAGTCATTCAGCGCATCATGCCCAGTTCAGCATCATCCATCAGTGCCTTGGCTAACGTGCAAAGGTAGTg < 1:142904/131‑1 (MQ=255) tCGTTGGGTCGCCTTCAAAATCGGGAGACGCATAGGTCTTGAAGGCACCCAGTCGATGATGAGTCATTCAGCGCATCATGCCCAGTTCAGCATCATCCATCAGTGCCTCGGCTAACGTGCAAAGGTAGTGCGAAGCCCAGATCAACTGa < 5:1805/149‑1 (MQ=255) | GGAGCTGATCTTGCCGGCCATCGGTGATGAGCGCTTCTGAGGCCAAAGCACCGGAGCCTTTGCGTGAGGGTTCGGCTTTGATGTCTCAGTCGATGGAACTGAATCTTGGACCGCGTCCAGCGAGAAAAGAGGCAAGGGGCTAGGTCGTTGGGTCGCCTTCAAAATCGGGAGACGCATAGGTCTTGAAGGCACCCAGTCGATGATGAGTCATTCAGCGCATCATGCCCAGTTCAGCATCATCCATCAGTGCCTTGGCTAACGTGCAAAGGTAGTGCGAAGCCCAGATCAACTGA > NC_002947/2854911‑2855203 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |