New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3445737 =	44 (0.810)	4 (0.080)	4/248	NT	9.5%	coding (131/1044 nt)	gpD	tail formation
	?	NC_002947	3445772 =	34 (0.660)					coding (166/1044 nt)	gpD	tail formation

CTTGCCGCGAATGACGATGGTGTCGGGCGGCCCGCTCAATTCCACCTCGTCGACGGTGTATGCGCCCAAGCGGGTCAGCCCTTGGCCCTCGTAGCCCATCATGACCACGACGTTGCTACCGCGTGCCGGCAGCGCAACAGCCTGGTCGCGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3445888‑3445737 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcggtAGCAACGTCGTGGTCATGATGGGCTACGAGGGCCAAGGGCTGACCCGCTTGGGCGCATACACCGTCGACGAGGTGGAATTGAGCGGGCCGCCCGACACCATCGTCATTCGCGGCAAGGCCAGCGACATGCGCGGCAGCGGCAAGAC  >  NC_002947/3445772‑3445917                                                                                                                                                                                                                                                                                                            CTTGCCGCGAATGACGATGGTGTCGGGCGGCCCGCTCAATTCCACCTCGTCGACGGTGTATGCGCCCAAGCGGGTCAGCCCTTGGCCCTCGTAGCCCATCATGACCACGACGTTGCTACCGCGTGCCGGCAGCGCAACAGCCTGGTCGC                                                                                                                                                       >  1:189723/1‑149                                                                                                                  TGCTACCGCGTGCCGGCAGCGCAACAGCCTGGTCGCGGTAGCAACGTCGTGGTCATGATGGGCTACGAGGGCCAAGGGCTGACCCACTTGGGCGCATACACCGTCGACGAGGTGGAATTGAGCGGGCCGCCCGACACCATCGTCATTCG                                      >  3:212319/1‑149                                                                                                                   GCTACCGCGTGCCGGCAGCGCAACAGCCTGGTCGCGGTAGCAACGTCGTGGTCATGATGGGCTACGAGGGCCAAGGGCTGACCCGCTTGGGCGCATACACCGTCGACGAGGTGGAATTGAGCGGGCCGCCCGACACCATCGTCATTCGC                                     >  7:54311/1‑149                                                                                                                       CCGCGTGCCTGCAGCGCAACAGCCTGGTCTCGGTAGCAACGTCGTGGTCATGATGGGCTACGAGGGCCAAGGGCTGACCCGCTTGGGCGCATACACCGTCGAGGAGGTGGAATTGAGCGGGCCGCCCGACACCATCGTC                                           <  2:176174/139‑1                                                                                                                       CCGCGTGCCGGCAGCGCAACAGCCTGGTCGCGGTAGCAACGTCGTGGACATGATGGGCTACGAGGGCCAAGGGCTGACCCGCTTGGGCGCATACACCGTCGACGAGGTGGAATTGAGCGGGCCGCCCGACACCATCGTC                                           >  1:176174/1‑139                                                                                                                                                    GCGGTAGCAACGTCGTGGTCATGATGGGCTACGAGGGCCAAGGGCTGACCCGCTTGGGCGCATACACCGTCGACGAGGTGGAATTGAGCGGGCCGCCCGACACCATCGTCATTCGCGGCAAGGCCAGCGACATGCGCGGCAGCGGC       >  3:50177/1‑146                                                                                                                                                      GGTAGCAACGTCGTGGTCATGATGGGCTACGAGGGCCAAGGGCTGACCCGCTTGGGCGCATACACCGTCGACGAGGTGGAATTGAGCGGGCCGCCCGACACCATCGTCATTCGCGGCAAGGCCAGCGACATGCGCGGCAGCGGCAAGAC  >  6:114436/1‑149                                                                                                                                                                                                                                                                                                            CTTGCCGCGAATGACGATGGTGTCGGGCGGCCCGCTCAATTCCACCTCGTCGACGGTGTATGCGCCCAAGCGGGTCAGCCCTTGGCCCTCGTAGCCCATCATGACCACGACGTTGCTACCGCGTGCCGGCAGCGCAACAGCCTGGTCGCGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3445888‑3445737 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcggtAGCAACGTCGTGGTCATGATGGGCTACGAGGGCCAAGGGCTGACCCGCTTGGGCGCATACACCGTCGACGAGGTGGAATTGAGCGGGCCGCCCGACACCATCGTCATTCGCGGCAAGGCCAGCGACATGCGCGGCAGCGGCAAGAC  >  NC_002947/3445772‑3445917

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.