| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3445737 = | 44 (0.810) | 4 (0.080) | 4/248 | NT | 9.5% | coding (131/1044 nt) | gpD | tail formation |
| ? | NC_002947 | 3445772 = | 34 (0.660) | coding (166/1044 nt) | gpD | tail formation | |||||
AATCGTCGCGGATGGCAGCGACATTACCGCGCTGATCAATGACCGGCTGTTGCTGCTACGCACATCGGACAAGCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTGGTCATGATGGGCTACGAGGGCCAAGGGCTGACCCGCTTGGGCGCATACACCGTCGACGAGGTGGAATTGAGCGGGCCGCCCGACACCATCGTCATTCGCGGCAAGGCCAGCGACATGCGCGGCAGCGGCAAGAC > NC_002947/3445624‑3445917 | aaTCGTCGCGGATGGCAGCGACATTACCGCGCTGATCAATGACCGGCTGTTGCTGCTACGCACATCGGACAAGCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTa < 5:88199/149‑1 (MQ=255) gcgaatgacgatggtgtcgggcggcccgctcaattccacctcgtcgacggtgtatgcgcccaagcgggtcagcccttggccctcgtagcccatcatgaccacgacgttgctACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGc > 7:54311‑M1/112‑149 (MQ=255) cgaatgacgatggtgtcgggcggcccgctcaattccacctcgtcgacggtgtatgcgcccaagtgggtcagcccttggccctcgtagcccatcatgaccacgacgttgctACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCa > 3:212319‑M1/111‑149 (MQ=255) ggCAGCGACATTACCGCGCTGATCAATGACCGGCTGTTGCTGCTACGCACATCGGACAAGCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTgg < 6:14220/148‑1 (MQ=255) aGCGACATTACCGCGCTGATCAATGACCGGCTGTTGCTGCTACGCACATCGGACAAGCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTGGTCat > 8:241587/1‑149 (MQ=255) cATTACCGCGCTGATCAATGACCGGCTGTTGCTGCTACGCACATCGGACAAGCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTa < 1:214921/128‑1 (MQ=255) cATTACCGCGCTGATCAATGACCGGCTGTTGCTGCTACGCACATCGGACAAGCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTa > 2:214921/1‑128 (MQ=255) aTTACCGCGCTGATCAATGACCGGCTGTTGCTGCTACGCACATCGGACAAGCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTGGTCATGATggg < 5:270186/149‑1 (MQ=255) aCCGCGCTGATCAATGACCGGCTGTTGCTGCTACGCACATCGGACAAGCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTGGTCATGATGGGCTa > 6:213620/1‑149 (MQ=255) gcgcTGATCAATGACCGGCTGTTGCTGCTACGCACATCGGACAAGCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTGGTCATGATGGGCTAc > 7:241629/1‑147 (MQ=255) tGATCAATGACCGGCTGTTGCTGCTACGCACATCGGACAAGCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTGGTCATGATGGGCTACGAg < 2:273754/146‑1 (MQ=255) tGATCAATGACCGGCTGTTGCTGCTACGCACATCGGACAAGCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTGGTCATGATGGGCTACGAg > 1:273754/1‑146 (MQ=255) cGGCTGTTGCTGCTACGCACATCGGACAAGCCCGTCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTGGTCATGATGGGc < 6:182279/129‑1 (MQ=255) cGGCTGTTGCTGCTACGCACATCGGACAAGCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTGGTCATGATGGGc > 5:182279/1‑129 (MQ=255) ggCTGTTGCTGCTACGCACATCGGACAAGCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTGGTCATGATGGGCTACGAGGGCCAAGGGCTGAcc < 3:105289/149‑1 (MQ=255) ggCTGTTGCTGCTACGCACATCGGACAAGCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTGGTCATGATGGGCTACGAGGGCCAAGGGCTGAcc < 1:195783/149‑1 (MQ=255) gctgctACGCACATCGGACAAGCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTGGTCATGATGGGCTACGAGGGCCAAgg < 6:61969/135‑1 (MQ=255) gctgctACGCACATCGGACAAGCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTGGTCATGATGGGCTACGAGGGCCAAgg > 5:61969/1‑135 (MQ=255) tgctACGCACATCGGACAAGCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTGGTCATGATGGGCTACGAGGGCCAAGGGCTGACCCGCTTGGgc > 3:34199/1‑149 (MQ=255) ctACGCACATCGGACAAGCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTGGTCATGATGGGCTACGAGGGCCAAGGGCTGACCCGCTTGGgcg > 5:44452/1‑148 (MQ=255) tACGCACATCGGACAAGCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTg > 8:59817/1‑104 (MQ=255) tACGCACATCGGACAAGCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTg < 7:59817/104‑1 (MQ=255) cGCACATCGGACAAGCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTGGTCATGATGGGCTACGAGGGCCAAGGGCTGACCCGCTTGGGCGCATa < 8:241629/149‑1 (MQ=255) cGGACAAGCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTGGTCATGATGGGCTACGAGGGCCAAGGGCTGACCCGCTTGGGCGCATaca < 1:310234/144‑1 (MQ=255) cGGACAAGCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTGGTCATGATGGGCTACGAGGGCCAAGGGCTGACCCGCTTGGGCGCATaca > 2:310234/1‑144 (MQ=255) gCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTGGTCATGATGGGCTACGAGGGCCAAGGGCTGACCCGCTTGGGCGCATACACCGTCGACGAgg < 5:141968/149‑1 (MQ=255) gCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTGGTCATGATGGGCTACGAGGGCCAAGGGCTGACCCGCTTGGGCGCATACACCGTCGACGAgg > 2:189723/1‑149 (MQ=255) gCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTGGTCATGATGGGCTACGAGGGCCAAGGGCTGACCCGCTTGGGCGCATACACCGTCGACGAgg < 2:6929/149‑1 (MQ=255) ccGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTGGTCATGATGGGCTACGAGGGCCAAGGGCTGACCCGCTTGGGCGCATACACCGTCGACGAGGTg < 4:34199/149‑1 (MQ=255) ggCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTGGTCATGATGGGCTACGAGGGCCAAGGGCTGACCCGCTTGGGCGCATACACCGTCGACGAGGTGGa < 6:203225/149‑1 (MQ=255) gCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTGGTCATGATGGGCTACGAGGGCCAAGGGCTGACCCGCTTGGGCGCATACACCGTCGACGAGGTGGaa > 8:227413/1‑149 (MQ=255) gAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTGGTCATGATGGGCTACGAGGGCCAAGGGCTGACCCGCTTGGGCGCATACACCGTCGACGAGGTGGAATTGAg < 7:227413/149‑1 (MQ=255) gTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTGGTCATGATGGGCTACGAGGGCCAAGGGCTGACCCGCTTGGGCGCATACACCGTCGACGAGGTGGAATTGAGCg > 2:329176/1‑149 (MQ=255) cgcATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTGGTCATGATGGGCTACGAGGGCCAAGGGCTGACCCGCTTGGGCGCATACACCGTCGACGAGGTGGAATTGAGCGGGCCGCCCGACACCATc < 5:213620/147‑1 (MQ=255) tgctaccgcgtgccggcagcgcaacagcctggtcgcggtAGCAACGTCGTGGTCATGATGGGCTACGAGGGCCAAGGGCTGACCCACTTGGGCGCATACACCGTCGACGAGGTGGAATTGAGCGGGCCGCCCGACACCATCGTCATTcg > 3:212319‑M2/40‑149 (MQ=255) gctaccgcgtgccggcagcgcaacagcctggtcgcggtAGCAACGTCGTGGTCATGATGGGCTACGAGGGCCAAGGGCTGACCCGCTTGGGCGCATACACCGTCGACGAGGTGGAATTGAGCGGGCCGCCCGACACCATCGTCATTcgc > 7:54311‑M2/39‑149 (MQ=255) cgacCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTGGTCATGATGGGCTACGAGGGCCAAGGGCTGACCCGCTTGGGCGCATACACCGTCGACGAGGTGGAATTGAGCGGGCCGCCCGACACCATCGTCATTcgcg > 5:22110/1‑149 (MQ=255) ccgcgtgcctgcagcgcaacagcctggtctcggtAGCAACGTCGTGGTCATGATGGGCTACGAGGGCCAAGGGCTGACCCGCTTGGGCGCATACACCGTCGAGGAGGTGGAATTGAGCGGGCCGCCCGACACCATCGTc < 2:176174‑M2/105‑1 (MQ=255) ccgcgtgccggcagcgcaacagcctggtcgcggtAGCAACGTCGTGGACATGATGGGCTACGAGGGCCAAGGGCTGACCCGCTTGGGCGCATACACCGTCGACGAGGTGGAATTGAGCGGGCCGCCCGACACCATCGTc > 1:176174‑M2/35‑139 (MQ=255) GCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTGGTCATGATGGGCTACGAGGGCCAAGGGCTGACCCGCTTGGGCGCATACACCGTCGACGAGGTGGAATTGAGCGGGCCGCCCGACACCATCGTCATTCGCGGCAAg > 1:189723‑M1/1‑149 (MQ=255) gCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTGGTCATGATGGGCTACGAGGGCCAAGGGCTGACCCGCTTGGGCGCATACACCGTCGACGAGGTGGAATTGAGCGGGCCGCCCGaca > 3:204003/1‑121 (MQ=255) gCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTGGTCATGATGGGCTACGAGGGCCAAGGGCTGACCCGCTTGGGCGCATACACCGTCGACGAGGTGGAATTGAGCGGGCCGCCCGaca < 4:204003/121‑1 (MQ=255) gCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTGGTCATGATGGGCTACGAGGGCCAAGGGCTGACCCGCTTGGGCGCATACACCGTCGACGAGGTGGAATTGAGCGGGCCGCCCGACACCATCGTCATTCGCGGCAAGGCCAGCGa < 6:44452/149‑1 (MQ=255) gcTGCCGGCACGCGGTAGCAACGTCGTGGTCATGATGGGCTACGAGGGCCAAGGGCTGACCCGCTGGGGCGCATACACCGTCGACGAGGTGGAATTGAGCGGGCCGCCCGACACCATCGTCATTCGCGGCAAGGCCAGCGACATGcgcg < 7:241587/149‑1 (MQ=255) cGGCACGCGGTAGCAACGTCGTGGTCATGATGGGCTACGAGGGCCAAGGGCTGACCCGCTTGGGCGCATACACCGTCGACGAGGTGGAATTGAGCGGGCCGCCCGACACCATCGTCATTCGCGGCAAGGCCAGCGACATGCgcggcagc > 2:21295/1‑149 (MQ=255) gcggtAGCAACGTCGTGGTCATGATGGGCTACGAGGGCCAAGGGCTGACCCGCTTGGGCGCATACACCGTCGACGAGGTGGAATTGAGCGGGCCGCCCGACACCATCGTCATTCGCGGCAAGGCCAGCGACATGCgcggcagcggc > 3:50177‑M2/6‑146 (MQ=255) ggtAGCAACGTCGTGGTCATGATGGGCTACGAGGGCCAAGGGCTGACCCGCTTGGGCGCATACACCGTCGACGAGGTGGAATTGAGCGGGCCGCCCGACACCATCGTCATTCGCGGCAAGGCCAGCGACATGCGCGGCAGCGGCAAGAc > 6:114436‑M2/4‑149 (MQ=255) | AATCGTCGCGGATGGCAGCGACATTACCGCGCTGATCAATGACCGGCTGTTGCTGCTACGCACATCGGACAAGCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTGGTCATGATGGGCTACGAGGGCCAAGGGCTGACCCGCTTGGGCGCATACACCGTCGACGAGGTGGAATTGAGCGGGCCGCCCGACACCATCGTCATTCGCGGCAAGGCCAGCGACATGCGCGGCAGCGGCAAGAC > NC_002947/3445624‑3445917 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |