| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3445737 = | 44 (0.810) | 4 (0.080) | 4/248 | NT | 9.5% | coding (131/1044 nt) | gpD | tail formation |
| ? | NC_002947 | 3445772 = | 34 (0.660) | coding (166/1044 nt) | gpD | tail formation | |||||
ATTTCTGGAGCCCTGCATGAAACCCACGTATCAAATCGTCGCGGATGGCAGCGACATTACCGCGCTGATCAATGACCGGCTGTTGCTGCTACGCACATC‑‑GGACAAGCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTGGTCATGATGGGCTACGAGGGCCAAGGGCTGACCCGCTTGGGCGCATACACCGTCGACGAGGTGGAATTGAGCGGGCCGCCCGACACCATCGTCATTCGCG > NC_002947/3445591‑3445883 | aTTTCTGGAGCCCTGCATGAAACCCACGTATCAAATCGTCGCGGATGGCAGCGACATTACCGCGCTGATCAATGACCGGCTGTTGCTGCTACGCACATC‑‑GGACAAGCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGAcc > 1:6929/1‑149 (MQ=255) gtcttgccgctgccgcgcatgtcgctggccttgccgcgaatgacgatggtgtcgggcggcccgctcaattccacctcgtcgacggtgtatgcgcccaagcgggtcagcccttggccctcgtagcccatcatgaccacgacgttgctAcc > 6:114436‑M1/147‑149 (MQ=255) cTGGAGCCCTGCATGAAACCCACGTATCAAATCGTCGCGGATGGCAGCGACATTACCGCGCTGATCAATGACCGGCTGTTGCTGCTACGCACATC‑‑GGACAAGCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGa > 2:195783/1‑149 (MQ=255) gccgctgccgcgcatgtcgctggccttgccgcgaatgacgatggtgtcgggcggcccgctcaattccacctcgtcgacggtgtatgcgcccaagcgggtcagcccttggccctcgtagcccatcatgaccacgacgttgctACcgc > 3:50177‑M1/142‑146 (MQ=255) gAGCCCTGCATGAAACCCACGTATCAAATCGTCGCGGATGGCAGCGACATTACCGCGCTGATCAATGACCGGCTGTTGCTGCTACGCACATC‑‑GGACAAGCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCa < 4:165791/149‑1 (MQ=255) ccTGCATGAAACCCACGTATCAAATCGTCGCGGATGGCAGCGACATTACCGCGCTGATCAATGACCGGCTGTTGCTGCTACGCACATC‑‑GGACAAGCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCt > 1:106030/1‑149 (MQ=255) aaaCCCACGTATCAAATCGTCGCGGATGGCAGCGACATTACCGCGCTGATCAATGACCGGCTGTTGCTGCTACGCACATC‑‑GGACAAGCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTgcgc < 3:40090/148‑1 (MQ=255) aCCCACGTATCAAATCGTCGCGGATGGCAGCGACATTACCGCGCTGATCAATGACCGGCTGTTGCTGCTACGCACATCTATGACAAGCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCt < 1:279585/149‑1 (MQ=255) cACGTATCAAATCGTCGCGGATGGCAGCGACATTACCGCGCTGATCAATGACCGGCTGTTGCTGCTACGCACATC‑‑GGACAAGCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCgg < 2:106030/149‑1 (MQ=255) aTCAAATCGTCGCGGATGGCAGCGACATTACCGCGCTGATCAATGACCGGCTGTTGCTGCTACGCACATC‑‑GGACAAGCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCAcgc > 6:270186/1‑149 (MQ=255) tCAAATCGTCGCGGATGGCAGCGACATTACCGCGCTGATCAATGACCGGCTGTTGCTGCTACGCACATC‑‑GGACAAGCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCAcgcg > 6:141968/1‑149 (MQ=255) aaTCGTCGCGGATGGCAGCGACATTACCGCGCTGATCAATGACCGGCTGTTGCTGCTACGCACATC‑‑GGACAAGCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTa < 5:88199/149‑1 (MQ=255) gcgaatgacgatggtgtcgggcggcccgctcaattccacctcgtcgacggtgtatgcgcccaagcgggtcagcccttggccctcgtagcccatcatgaccacgacgttgctACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGc > 7:54311‑M1/112‑149 (MQ=255) cgaatgacgatggtgtcgggcggcccgctcaattccacctcgtcgacggtgtatgcgcccaagtgggtcagcccttggccctcgtagcccatcatgaccacgacgttgctACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCa > 3:212319‑M1/111‑149 (MQ=255) gacgatggtgtcgggcggcccgctcaattccacctcgtcgacggtgtatgcgcccaagcgggtcagcccttggccctcgtagcccatcatgtccacgacgttgctACCGCGACCAGGCTGTTGCGCTGCCGGCACGCgg > 1:176174‑M1/106‑139 (MQ=255) gacgatggtgtcgggcggcccgctcaattccacctcctcgacggtgtatgcgcccaagcgggtcagcccttggccctcgtagcccatcatgaccacgacgttgctACCGAGACCAGGCTGTTGCGCTGCAGGCACGCgg < 2:176174‑M1/34‑1 (MQ=255) ggCAGCGACATTACCGCGCTGATCAATGACCGGCTGTTGCTGCTACGCACATC‑‑GGACAAGCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTgg < 6:14220/148‑1 (MQ=255) aGCGACATTACCGCGCTGATCAATGACCGGCTGTTGCTGCTACGCACATC‑‑GGACAAGCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTGGTCat > 8:241587/1‑149 (MQ=255) aGCGACATTACCGCGCTGATCAATGACCGGCTGTTGCTGCTACGCACATC‑‑GGACAAGCCCGGCATGGAGTCGGACGAGGTCGAGCTGCGCATTGACGACCGCGACCAGGc > 2:212375/1‑110 (MQ=255) aGCGACATTACCGCGCTGATCAATGACCGGCTGTTGCTGCTACGCACATC‑‑GGACAAGCCCGGCATGGAGTCGGACGAGGTCGAGCTGCGCATTGACGACCGCGACCAGGc < 1:212375/110‑1 (MQ=255) cATTACCGCGCTGATCAATGACCGGCTGTTGCTGCTACGCACATC‑‑GGACAAGCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTa > 2:214921/1‑128 (MQ=255) cATTACCGCGCTGATCAATGACCGGCTGTTGCTGCTACGCACATC‑‑GGACAAGCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTa < 1:214921/128‑1 (MQ=255) aTTACCGCGCTGATCAATGACCGGCTGTTGCTGCTACGCACATC‑‑GGACAAGCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTGGTCATGATggg < 5:270186/149‑1 (MQ=255) aCCGCGCTGATCAATGACCGGCTGTTGCTGCTACGCACATC‑‑GGACAAGCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTGGTCATGATGGGCTa > 6:213620/1‑149 (MQ=255) ccGCGCTGATCAATGACCGGCTGTTGCTGCTACGCACATC‑‑GGACAAGCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTg < 1:286591/105‑1 (MQ=255) ccGCGCTGATCAATGACCGGCTGTTGCTGCTACGCACATC‑‑GGACAAGCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTg > 2:286591/1‑105 (MQ=255) gcgcTGATCAATGACCGGCTGTTGCTGCTACGCACATC‑‑GGACAAGCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTGGTCATGATGGGCTAc > 7:241629/1‑147 (MQ=255) tGATCAATGACCGGCTGTTGCTGCTACGCACATC‑‑GGACAAGCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTGGTCATGATGGGCTACGAg > 1:273754/1‑146 (MQ=255) tGATCAATGACCGGCTGTTGCTGCTACGCACATC‑‑GGACAAGCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTGGTCATGATGGGCTACGAg < 2:273754/146‑1 (MQ=255) cGGCTGTTGCTGCTACGCACATC‑‑GGACAAGCCCGTCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTGGTCATGATGGGc < 6:182279/129‑1 (MQ=255) cGGCTGTTGCTGCTACGCACATC‑‑GGACAAGCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTGGTCATGATGGGc > 5:182279/1‑129 (MQ=255) ggCTGTTGCTGCTACGCACATC‑‑GGACAAGCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTGGTCATGATGGGCTACGAGGGCCAAGGGCTGAcc < 3:105289/149‑1 (MQ=255) ggCTGTTGCTGCTACGCACATC‑‑GGACAAGCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTGGTCATGATGGGCTACGAGGGCCAAGGGCTGAcc < 1:195783/149‑1 (MQ=255) gctgctACGCACATC‑‑GGACAAGCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTGGTCATGATGGGCTACGAGGGCCAAgg < 6:61969/135‑1 (MQ=255) gctgctACGCACATC‑‑GGACAAGCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTGGTCATGATGGGCTACGAGGGCCAAgg > 5:61969/1‑135 (MQ=255) tgctACGCACATC‑‑GGACAAGCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTGGTCATGATGGGCTACGAGGGCCAAGGGCTGACCCGCTTGGgc > 3:34199/1‑149 (MQ=255) ctACGCACATC‑‑GGACAAGCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTGGTCATGATGGGCTACGAGGGCCAAGGGCTGACCCGCTTGGgcg > 5:44452/1‑148 (MQ=255) tACGCACATC‑‑GGACAAGCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTg < 7:59817/104‑1 (MQ=255) tACGCACATC‑‑GGACAAGCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTg > 8:59817/1‑104 (MQ=255) cGCACATC‑‑GGACAAGCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTGGTCATGATGGGCTACGAGGGCCAAGGGCTGACCCGCTTGGGCGCATa < 8:241629/149‑1 (MQ=255) c‑‑GGACAAGCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTGGTCATGATGGGCTACGAGGGCCAAGGGCTGACCCGCTTGGGCGCATaca < 1:310234/144‑1 (MQ=255) c‑‑GGACAAGCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTGGTCATGATGGGCTACGAGGGCCAAGGGCTGACCCGCTTGGGCGCATaca > 2:310234/1‑144 (MQ=255) gCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTGGTCATGATGGGCTACGAGGGCCAAGGGCTGACCCGCTTGGGCGCATACACCGTCGACGAgg < 5:141968/149‑1 (MQ=255) gCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTGGTCATGATGGGCTACGAGGGCCAAGGGCTGACCCGCTTGGGCGCATACACCGTCGACGAgg > 2:189723/1‑149 (MQ=255) gCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTGGTCATGATGGGCTACGAGGGCCAAGGGCTGACCCGCTTGGGCGCATACACCGTCGACGAgg < 2:6929/149‑1 (MQ=255) ccGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTGGTCATGATGGGCTACGAGGGCCAAGGGCTGACCCGCTTGGGCGCATACACCGTCGACGAGGTg < 4:34199/149‑1 (MQ=255) ggCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTGGTCATGATGGGCTACGAGGGCCAAGGGCTGACCCGCTTGGGCGCATACACCGTCGACGAGGTGGa < 6:203225/149‑1 (MQ=255) gCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTGGTCATGATGGGCTACGAGGGCCAAGGGCTGACCCGCTTGGGCGCATACACCGTCGACGAGGTGGaa > 8:227413/1‑149 (MQ=255) gAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTGGTCATGATGGGCTACGAGGGCCAAGGGCTGACCCGCTTGGGCGCATACACCGTCGACGAGGTGGAATTGAg < 7:227413/149‑1 (MQ=255) gTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTGGTCATGATGGGCTACGAGGGCCAAGGGCTGACCCGCTTGGGCGCATACACCGTCGACGAGGTGGAATTGAGCg > 2:329176/1‑149 (MQ=255) cgcATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTGGTCATGATGGGCTACGAGGGCCAAGGGCTGACCCGCTTGGGCGCATACACCGTCGACGAGGTGGAATTGAGCGGGCCGCCCGACACCATc < 5:213620/147‑1 (MQ=255) cgacCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTGGTCATGATGGGCTACGAGGGCCAAGGGCTGACCCGCTTGGGCGCATACACCGTCGACGAGGTGGAATTGAGCGGGCCGCCCGACACCATCGTCATTcgcg > 5:22110/1‑149 (MQ=255) | ATTTCTGGAGCCCTGCATGAAACCCACGTATCAAATCGTCGCGGATGGCAGCGACATTACCGCGCTGATCAATGACCGGCTGTTGCTGCTACGCACATC‑‑GGACAAGCCCGGCATGGAGTCGGACGAGTTCGAGCTGCGCATTGACGACCGCGACCAGGCTGTTGCGCTGCCGGCACGCGGTAGCAACGTCGTGGTCATGATGGGCTACGAGGGCCAAGGGCTGACCCGCTTGGGCGCATACACCGTCGACGAGGTGGAATTGAGCGGGCCGCCCGACACCATCGTCATTCGCG > NC_002947/3445591‑3445883 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |