| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3642652 = | 31 (0.570) | 3 (0.060) | 3/244 | NT | 8.7% | coding (553/1431 nt) | PP_3209 | isoxanthopterin deaminase |
| ? | NC_002947 | 3642714 = | 34 (0.670) | coding (491/1431 nt) | PP_3209 | isoxanthopterin deaminase | |||||
GCCAGGCATGGCCTTCGACAGCGCACAGATCCTCTTCGAAGAAGCCGAGCGCCTGGGGCTGCGCTTCATCCTTTGCCGGG‑‑GCGGCGCAACCCAGGTACGTCAGGCGGAAGGCCCCGCGACAGCCGGACCTGAGACCCTCACGCAGTACCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3642803‑3642652‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtacctggGTTGCGCCGCCCCGGCAAAGGATGAAGCGCAGCCCCAGGCGCTCGGCTTCTTCGAAGAGGATCTGTGCGCTGTCGAAGGCCATGCCTGGCAAGTACAGGTAATGATGGTCGGCCACCGTGCTGCAGCCGGAGCGGGCCAGCTCCAC > NC_002947/3642714‑3642859 GCCAGGCATGGCCTTCGACAGCGCACAGATCCTCTTCGAAGAAGCCGAGCGCCTGGGGCTGCGCTTCATCCTTTGCCGGG‑‑GCGGCGCAACCCAGGTACGTCAGGCGGAAGGCCCCGCGACAGCCGGACCTGAGACCCTCACGCAGTAC < 2:312458/148‑1 CCAGGCATGGCCTTCGACAGCGCACAGACCCTCTTCGAAGAAGCCGAGCGCCTGGGGCTGCGCTTCATCCTTTGCCGGG‑‑GCGGCGCAACCCAGGTACGTCAGGCGGAAGGCCCCGCGACAGCCGGACCTGAGACCCTCACGCAGTACCT < 8:191272/149‑1 GGCATGGCCTTCGACAGCGCACAGATCCTCTTCGAAGAAGCCGAGCGCCTGGGGCTGCGCTTCATCCTTTGCCGGGCCGTGGCGCAACCCAGGTACGTCAGGCGGAAGGCCCCGCGACAGCCGGACCTGAGACCCTCACGCAGTACCTG < 1:107038/149‑1 GCAACCCAGGTACGTCAGGCGGAAGGCCCCGCGACAGCCGGACCTGAGACCCTCACGCAGTACCTGGGTTGCGCCGCCCCGGCAAAGGATGAAGCGCAGCCCCAGGCGCTCGGCTTCTTCGAAGAGGATCTGTGCGCTGTCGAAGGCCA > 3:307327/1‑149 CCCAGGTACGTCAGGCGGAAGGCCCCGCGACAGCCGGACCTGAGACCCTCACGCAGTACCTGGGTTGCGCCGCCCCGGCAAAGGATGAAGCGCAGCCCCAGGCGCTCGGCTTCTTCGAAGAGGATCTGTGCGCTGTCGAAGGCCATGCC > 3:7392/1‑149 GAAGGCCCCGCGACAGCCGGACCTGAGACCCTCACGCAGTACCTGGGTTGCGCCGCCCCGGCAAAGGATGAAGCGCAGCCCCAGGCGCTCGGCTTCTTCGAAGAGGATCTGTGCGCTGTCGAAGGCCATGCCTGGCAAGTACAGGTAAT < 4:307327/149‑1 ACCTGGGTTGCGCCGCCCCGGCAAAGGATGAAGCGCAGCCCCAGGCGCTCGGCTTCTTCGAAGAGGATCTGTGCGCTGTCGAAGGCCATGCCTGGCAAGTACAGGTAATGATGGTCGGCCACCGTGCTGTAGCCGGAGCGGGCCAGCTC < 5:239541/149‑1 ACCTGGGTTGCGCCGCCCCGGCAAAGGATGAAGCGCAGCCCCAGGCGCTCGGCTTCTTCGAAGAGGATCTGTGCGCTGTCGAAGGCCATGCCTGGCAAGTACAGGTAATGATGGTC < 7:29927/116‑1 ACCTGGGTTGCGCCGCCCCGGCAAAGGATGAAGCGCAGCCCCAGGCGCTCGGCTTCTTCGAAGAGGATCTGTGCGCTGTCGAAGGCCATGCCTGGCAAGTACAGGTAATGATGGTC > 8:29927/1‑116 GGGTTGCGCCGCCCCGGCAAAGGATGAAGCGCAGCCCCAGGCGCTCGGCTTCTTCGAAGAGGATCTGTGCGCTGTCGAAGGCCATGCCTGGCAAGTACAG < 3:141451/100‑1 GGGTTGCGCCGCCCCGGCAAAGGATGAAGCGCAGCCCCAGGCGCTCGGCTTCTTCGAAGAGGATCTGTGCGCTGTCGAAGGCCATGCCTGGCAAGTACAG > 4:141451/1‑100 GGTTGCGCCGCCCCGGCAAAGGATGAAGCGCAGCCCCAGGCGCTCGGCTTCTTCGAAGAGGATCTGTGCGCTGTCGAAGGCCATGCCTGGCAAGTACAGGTAATGATGGTCGGCCACCGTGCTGCAGCCGGAGCGGGCCAGCTCCAC < 6:269616/147‑1 GCCAGGCATGGCCTTCGACAGCGCACAGATCCTCTTCGAAGAAGCCGAGCGCCTGGGGCTGCGCTTCATCCTTTGCCGGG‑‑GCGGCGCAACCCAGGTACGTCAGGCGGAAGGCCCCGCGACAGCCGGACCTGAGACCCTCACGCAGTACCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3642803‑3642652‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtacctggGTTGCGCCGCCCCGGCAAAGGATGAAGCGCAGCCCCAGGCGCTCGGCTTCTTCGAAGAGGATCTGTGCGCTGTCGAAGGCCATGCCTGGCAAGTACAGGTAATGATGGTCGGCCACCGTGCTGCAGCCGGAGCGGGCCAGCTCCAC > NC_002947/3642714‑3642859 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |