New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3672080	34 (0.630)	5 (0.100)	5/252	NT	11.5%	coding (131/393 nt)	PP_3235	hypothetical protein
	?	NC_002947	= 3672110	44 (0.840)					coding (161/393 nt)	PP_3235	hypothetical protein

GTCCATTGGCAAATACTGCAACCGGGACGTGGTCACCGCACCACCCGGTATCTCCATCTATGCCGCGGCGCGCATGATGAATCAGTACCATGTCGGCGATCTTGTGCTGGCCGAACATGTCGACGGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3671952‑3672080 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgaTCGGTGATCAGGCCGATGGGCCGACAACGCTCGCCGTCGACATGTTCGGCCAGCACAAGATCGCCGACATGGTACTGATTCATCATGCGCGCCGCGGCATAGATGGAGATACCGGGTGGTGCGGTGACCACGTCCCGGTTGCAGTATT  <  NC_002947/3672110‑3671963                                                                                                                                                                                                                                                                                       GTCCATTGGCAAATACTGCAACCGGGACGTGGTCACCGCACCACCCGGTATCTCCATCTATGCCGCGGCGCGCATGATGAATCAGTACCATGTCGGCGATCTTGTGCTGGCCGAACATGTCGACGGCGATCGGTGATCAGGCCGATGGG                                                                                                                                  >  4:21565/1‑149             ATACTGCAACCGGGACGTGGTCACCGCACCACCCGGTATCTCCATCTATGCCGCGGCGCGCATGATGAATCAGTACCATGTCGGCGATCTTGTGCTGGCCGAACATGTCGACGGCGATCGGTGATCAGGCCGATGGGCCGACAACGCTC                                                                                                                      <  5:132398/149‑1                   CAACCGGGACGTGGTCACCGCACCACCCGGTATCTCCATCTATGCCGCGGCGCGCATGATGAATCAGTACCATGTCGGCGATCTTGTGCTGGCCGAACATGTCGACGGCGATCGGTGATCAGGCCGATGGGCCGACAACGCTCGCCGT                                                                                                                 <  3:21565/148‑1                                GTCACCGCACCACCCGGTATCTCCATCTATGCCGCGGCGCGCATGATGAATCAGTACCATGTCGGCGATCTTGTGCTGGCCGAACATGTCGACGGCGATCGGTGATCAGGCCGATGGGCCGACAACGCTCGCCGTCG                                                                                                               <  3:208663/137‑1                                GTCACCGCACCACCCGGTATCTCCATCTATGCCGCGGCGCGCATGATGAATCAGTACCATGTCGGCGATCTTGTGCTGGCCGAACATGTCGACGGCGATCGGTGATCAGGCCGATGGGCCGACAACGCTCGCCGTCG                                                                                                               >  4:208663/1‑137                                                                                                                                GATCGGTGATCAGGCCGATGGGCCGACAACGCTCGCCGTCGACATGTTCGGCCAGCACAAGATCGCCGACATGGTACTGATTCATCATGCGCGCCGCGGCATAGATGGAGATACCGGGTGGTGCGGTGACCACGTCCCGGTTGCAGTAT   >  4:141759/1‑149                                                                                                                                GATCGGTGATCAGGCCGATGGGCCGACAACGCTCGCCGTCGACATGTTCGGCCAGCACAAGATCGCCGACATGGTACTGATTCATCATGCGCGCCGCGGCATAGATGGAGATACCGGGTGGTGCGGTGACCACGTCCCGGTTGCAGTAT   >  8:26779/1‑149                                                                                                                                 ATCGGTGATCAGGCCGATGGGCCGACAACGCTCGCCGTCGACATGTTCGGCCAGCACAAGATCGCCGACATGGTACTGATTCATCATGCGCGCCGCGGCATAGATGGAGATACCGGGTGGTGCGGTGACCACGTCCCGGTTGCAGTATT  >  7:118102/1‑149                                                                                                                                                                                                                                                                                       GTCCATTGGCAAATACTGCAACCGGGACGTGGTCACCGCACCACCCGGTATCTCCATCTATGCCGCGGCGCGCATGATGAATCAGTACCATGTCGGCGATCTTGTGCTGGCCGAACATGTCGACGGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3671952‑3672080 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgaTCGGTGATCAGGCCGATGGGCCGACAACGCTCGCCGTCGACATGTTCGGCCAGCACAAGATCGCCGACATGGTACTGATTCATCATGCGCGCCGCGGCATAGATGGAGATACCGGGTGGTGCGGTGACCACGTCCCGGTTGCAGTATT  <  NC_002947/3672110‑3671963

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.