New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4054993 =	45 (0.830)	5 (0.100)	5/250	NT	10.7%	coding (224/393 nt)	PP_3574	hypothetical protein
	?	NC_002947	4055047 =	40 (0.770)					coding (278/393 nt)	PP_3574	hypothetical protein

CACGGCGATCACGTCGATCTCCATCAGCCACTCGGCCTGGGCCAACCCGGCCACCACCAACCCGGTGGAAATCGGGAACACGCCCTTGAGCCACTTGCCCACCTCCTTGTACACCGGCTCGCGGAAGCGCGGGTCGGTGATGTAGGTGGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4055144‑4054993 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtggGCAAGTGGCTCAAGGGCGTGTTCCCGATTTCCACCGGGTTGGTGGTGGCCGGGTTGGCCCAGGCCGAGTGGCTGATGGAGATCGACGTGATCGCCGTGGTTCCCGATCAGCAATGACCGCAGGCCTGAATGGCGGGTGGTGACTG  >  NC_002947/4055047‑4055191                                                                                                                                                                                                                                                                                                           CACGGCGATCACGTCGATCTCCATCAGCCACTCGGCCTGGGCCAACCCGGCCACCACCAACCCGGTGGAAATCGGGAACACGCCCTTGAGCCACTTGCCCACCTCCTTGTACACCGGCTCGCGGAAGCGCGGGTCGGTGATGTAGGTGG                                                                                                                                                      >  7:294609/1‑149  ACGGCGATCACGTCGATCTCCATCAGCCACTCGGCCTGGGCCAACCCGGCCACCACCAACCCGGTGGAAATCGGGAACACGCCCTTGAGCCACTTGCCCACCTCCTTGTACACCGGCTCGCGGAAGCGCGGGTCGGTGATGTAGGTGGT                                                                                                                                                     >  2:144012/1‑149   CGGCGATCACGTCGATCTCCATCAGCCACTCGGCCTGGGCCAACCCGGCCACCACCAACCCGGTGGAAATCGGGAACACGCCCTTGAGCCACTTGCCCACCTCCTTGTACACCGGCTCGCGGAAGCGCGGGTCGGTGATGTAGGTGGTG                                                                                                                                                    <  5:207259/149‑1       GATCACGTCGATCTCCATCAGCCACTCGGCCTGGGCCAACCCGGCCACCACCAACCCGGTGGAAATCGGGAACACGCCCTTGAGCCACTTGCCCACCTCCTTGTACACCGGCTCGCGGAAGCGCGGGTCGGTGATGTAGGTGGTGGag                                                                                                                                                 >  3:142670/1‑146       GATCACGTCGATCTCCATCAGCCACTCGGCCTGGGCCAACCCGGCCACCACCAACCCGGTGGAAATCGGGAACACGCCCTTGAGCCACTTGCCCACCTCCTTGTACACCGGCTCGCGGAAGCGCGGGTCGGTGATGTAGGTGGTG                                                                                                                                                    <  4:142670/145‑1                                                                                              CTTGCCCACCTCCTTGTACACCGGCTCGCGGAAGCGCGGGTCGGTGATGTAGGTGGTGGGCAAGTGGCTCAAGGGCGTGTTCCCGATTTCCACCGGGTTGGTGGTGGCCGGGTTGGCCCAGGCCGAGTGGCTGGTGGAGATCGACGTGA                                                         >  3:179810/1‑149                                                                                                  CCCACCTCCTTGTACACCGGCTCGCGGAAGCGCGGGTCGGTGATGTAGGTGGTGGGCAAGTGGCTCAAGGGCGTGTTCCCGATTTCCACCGGGTTGGTGGTGGCCGGGTTGGCCCAGGCCGAGTGGCTGATGGAGATCGACGTGATCGC                                                     >  6:136268/1‑149                                                                                                   CCACCTCCTCGTACACCGGCTCGCGGAAGCGCGGGTCGGTGATGTAGGTGGTGGGCAAGTGGCTCAAGGGCGTGTTCCCGATTTCCACCGGGTTGGTGGTGGCCGGGTTGGCCCAGG                                                                                    <  5:46473/117‑1                                                                                                   CCACCTCCTCGTACACCGGCTCGCGGAAGCGCGGGTCGGTGATGTAGGTGGTGGGCAAGTGGCTCAAGGGCGTGTTCCCGATTTCCACCGGGTTGGTGGTGGCCGGGTTGGCCCAGG                                                                                    >  6:46473/1‑117                                                                                                                                  CGGGTCGGTGATGTAGGTGGTGGGCAAGTGGCTCAAGGGCGTGTTCCCGATTTCCACCGGGTTGGTGGTGGCCGGGTTGGCCCAGGCCGAGTGGCTGGTGGAGATCGACGTGATCGCCGTGGTTCCCGATCAGCAATGACCGCGGGCCT                     <  4:179810/149‑1                                                                                                                                                    GGTGGGCAAGTGGCTCAAGGGCGTGTTCCCGATTTCCACCGGGTTGGTGGTGGCCGGGTTGGCCCAGGCCGAGTGGCTGATGGAGATCGACGTGATCGCCGTGGTTCCCGATCA                                      >  3:140472/1‑114                                                                                                                                                    GGTGGGCAAGTGGCTCAAGGGCGTGTTCCCGATTTCCACCGGGTTGGTGGTGGCCGGGTTGGCCCAGGCCGAGTGGCTGATGGAGATCGACGTGATCGCCGTGGTTCCCGATCA                                      <  4:140472/114‑1                                                                                                                                                     GTGGGCAAGTGGCTCAAGGGCGTGTTCCCGATTTCCACCGGGTTGGTGGTGGCCGGGTTGGCCCAGGCCGAGTGGCTGATGGAGATCGACGTGATCGCCGTGGTTCCCGATCAGCAATGACCGCAGGCCTGAATGGCGGGTGGTGACTG  >  5:11637/1‑149                                                                                                                                                                                                                                                                                                           CACGGCGATCACGTCGATCTCCATCAGCCACTCGGCCTGGGCCAACCCGGCCACCACCAACCCGGTGGAAATCGGGAACACGCCCTTGAGCCACTTGCCCACCTCCTTGTACACCGGCTCGCGGAAGCGCGGGTCGGTGATGTAGGTGGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4055144‑4054993 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtggGCAAGTGGCTCAAGGGCGTGTTCCCGATTTCCACCGGGTTGGTGGTGGCCGGGTTGGCCCAGGCCGAGTGGCTGATGGAGATCGACGTGATCGCCGTGGTTCCCGATCAGCAATGACCGCAGGCCTGAATGGCGGGTGGTGACTG  >  NC_002947/4055047‑4055191

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.