New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4298253 =	45 (0.830)	6 (0.120)	6/250	NT	13.0%	coding (39/354 nt)	PP_3769	hypothetical protein
	?	NC_002947	4298310 =	37 (0.710)					coding (96/354 nt)	PP_3769	hypothetical protein

TACACCGTACGGTCATGGCCGCCATAAACCGTCGCCCCCACCACGGCGCCGACCACTGCCGCACCTAGAAGTGGTCCCGGCCCATACCAACCACCATGCCCATGGCCGCCATAGCCGCCGTGCGCTGCTGCAGGCCCGCTGATGGCCAGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4298405‑4298253 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcaTGGTGGTTGGTATGGGCCGGGACCACTTCTAGGTGCGGCAGTGGTCGGCGCCGTGGTGGGGGCGACGGTTTATGGCGGCCA‑TGACCGTACGGTGTATGTCGAGCGCCAGCCGGTCTATTACGCGC  >  NC_002947/4298310‑4298434                                                                                                                                                                                                                                                                                         TACACCGTACGGTCATGGCCGCCATAAACCGTCGCCCCCACCACGGCGCCGACCACTGCCGCACCTAGAAGTGGTCCCGGCCCATACCAACCACCATGCCCATGGCCGCCATAGCCGCCGTGCGCTGCTGCAGGCCCGCTGATGGCCAG                                                                                                                                    >  4:141689/1‑149  ACACCGTACGGTCATGGCCGCCATAAACCGTAGCCCCCACCACGGCGCCGCCCACTGCCGCACCTAGAAGTGGTCCCGGCCCATACCAACCACCATGCCCATGGCCGCCATAGCCGCCGTGCGCTGCTGCAGGCCCGCTGATGGCCAGG                                                                                                                                   >  1:210120/1‑149   CACCGTACGGTCATGGCCGCCATAAACCGTCGCCCCCACCACGGCGCCGACCACTGCCGCACCTAGAAGTGGTCCCGGCCCATACCAACCACCATGCCCATGGCCGCCATAGCCGCCGTGCGCTGCTGCAGGCCCGCTGATGGCCAGG                                                                                                                                   <  3:31935/148‑1     CCGTACGGTCATGGCCGCCATAAACCGTCGCCCCCACCACGGCGCCGACCACTGCCGCACCTAGAAGTGGTCCCGGCCCATACCAACCACCATGCCCATGGCCGCCATAGCCGCCGTGCGCTGCTGCAGGCCCGCTGATGGCCAGGGCA                                                                                                                                >  7:18968/1‑149                                                                                              CCATGCCCATGGCCGCCATAGCCGCCGTGCGCTGCTGCAGGCCCGCTGATGGCCAGGGCATGGTGGTTGGTATGGGCCGGGACCACTTCTAGGTGC                                                                                            >  1:296543/1‑96                                                                                              CCATGCCCATGGCCGCCATAGCCGCCGTGCGCTGCTGCAGGCCCGCTGATGGCCAGGGCATGGTGGTTGGTATGGGCCGGGACCACTTCTAGGTGC                                                                                            <  2:296543/96‑1                                                                                               CATGCCCATGGCCGCCATAGCCGCCGTGCGCTGCTGCAGGCCCGCTGATGGCCAGGGCATGGTGGTTGGTATGGGCCGGGACCACTTCTAGGTGCGGCAGTGGTCGGCGCCGTGGTGGGGGCGACGGTTTATGGCGGCCA‑TGACCGTAC                                     >  2:71082/1‑149                                                                                                    CCATGGCCGCCATAGCCGCCGTGCGCTGCTGCAGGCCCGCTGATGGCCAGGGCATGGTGGTTGGTATGGGCCGGGACCACTTCTAGGTGCGGCAGTGGTCGGCGCCGTGGTGGGGGCGACGGTTTATGGCGGCCA‑TGACCGTACGGTGT                                >  5:88848/1‑149                                                                                                                            GCTGCTGCAGGCCCGCTGATGGCCAGGGCATGGTGGTTGGTATGGGCCGGGACCACTTCTAGGTGCGGCAGTGGTCGGCGCCGTGGTGGGGGCGACGGTTTATGGCGGCCA‑TGACCGTACGGTGTATGTCGAGCGCCAGCCGGTCTATT        <  6:88848/149‑1                                                                                                                                   CAGGCCCGCTGATGGCCAGGGCATGGTGGTTGGTATGGGCCGGGACCACTTCTAGGTGCGGCAGTGGTCGGCGCCGTGGTGGGGGCGACGGTTTATGGCGGCCACTGACCGTACGGTGTATGTCGAGCGCCAGCCGGTCTATTACGCGC  <  1:71082/149‑1                                                                                                                                                                                                                                                                                         TACACCGTACGGTCATGGCCGCCATAAACCGTCGCCCCCACCACGGCGCCGACCACTGCCGCACCTAGAAGTGGTCCCGGCCCATACCAACCACCATGCCCATGGCCGCCATAGCCGCCGTGCGCTGCTGCAGGCCCGCTGATGGCCAGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4298405‑4298253 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcaTGGTGGTTGGTATGGGCCGGGACCACTTCTAGGTGCGGCAGTGGTCGGCGCCGTGGTGGGGGCGACGGTTTATGGCGGCCA‑TGACCGTACGGTGTATGTCGAGCGCCAGCCGGTCTATTACGCGC  >  NC_002947/4298310‑4298434

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.