| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4299561 = | 47 (0.870) | 3 (0.060) | 3/248 | NT | 6.9% | coding (192/870 nt) | PP_3772 | repressor protein‑like protein |
| ? | NC_002947 | 4299600 = | 36 (0.700) | coding (231/870 nt) | PP_3772 | repressor protein‑like protein | |||||
CCGCTTCGGGCCAGCATCTGTTTGACCAGGTCGGCTGCAGAGAGCTTGTTGTCACCTGGCTCGACAGCCGCTTGTGCGTGTTCGCCTGGCGACAGCGCGTCGAACCAGCCCCGTGGCAAGCCTTCGATGCCCTCGATGCGGCGGGCCACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4299710‑4299561‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccacgGGGCTGGTTCGACGCGCTGTCGCCAGGCGAACACGCACAAGCGGCTGTCGAGCCAGGTGACAACAAGCTCTCTGCAGCCGACCTGGTCAAACAGATGCTGGCCCGAAGCGGCAAAGGTATCTCCGAAGAAACCCGGCAAAGGCTG > NC_002947/4299600‑4299744 CCGCTTCGGGCCAGCATCTGTTTGACCAGGTCGGCTGCAGAGAGCTTGTTGTCACCTGGCTCGACAGCCGCTTGTGCGTGTTCGCCTGGCGACAGCGCGTCGAACCAGCCCCGTGGCAAGCCTTCGATGCCCTCGATGCGGCGGGCCAC > 1:15921/1‑149CCGCTTCGGGCCAGCATCTGTTTGACCAGGTCGGCTGCAGAGAGCTTGTTGTCACCTGGCTCGACAGCCGCTTGTGCGTGTTCGCCTGGCGACAGCGCGTCGAACCAGCCCCGTGGCAAGCCTTCGATGCCCTCGATGCGGCGGGCCAC < 6:277423/149‑1CCGCTTCGGGCCAGCATCTGTTTGACCAGGTCGGCTGCAGAGAGCTTGTTGTCACCTGGCTCGACAGCCGCTTGTGCGTGTGCGCCTGGCGACAGCGCGTCGAACCAGCCCCGTGGCAAGCCTTCGATGCCCTCGATGCGGCGGGCCAC > 4:85091/1‑149 CCCGTGGCAAGCCTTCGATGCCCTCGATGCGGCGGGCCACGGGGCTGGTTCGACGCGCTGTCGCCAGGCGAACACGCACAAGCGGCTGTCGAGCCAGGTGACAACAAGCTCTCTGCAGCCGACCTGGTC < 1:269928/129‑1 CCCGTGGCAAGCCTTCGATGCCCTCGATGCGGCGGGCCACGGGGCTGGTTCGACGCGCTGTCGCCAGGCGAACACGCACAAGCGGCTGTCGAGCCAGGTGACAACAAGCTCTCTGCAGCCGACCTGGTC > 2:269928/1‑129 CGTGGCAAGCCTTCGAGGCCCTCGATGCGGCGGGCCACGGGGCTGGTTCGACGCGCTGTCGCCAGGCGAACACGCACAAGCGGCTGTCGAGCCAGGTGACAACAAGCTCTCTGCAGCCGACCTGGTCAAACAGATGCTGGCCCGAAGCG > 8:94253/1‑149 GGCCACGGGGCTGGTTCGACGCGCTGTCGCCAGGCGAACACGCACAAGCGGCTGTCGAGCCAGGTGACAACAAGCTCTCTGCAGCCGACCTGGTCAAACAGATGCTGGCCCGAAGCGGCAAAGGTATCTCCGAAGAAACCCGGCAAAGG < 7:94253/149‑1 CACGGGGCTGGTTCGACGCGCTGTCGCCAGGCGAACACGCACAAGCGGCTGTCGAGCCAGGTGACAACAAGCTCTCTGCAGCCGACCTGGTCAAACAGATGCTGGCCCGAAGCGGCAAAGGTATCTCCGAAGAAACCCGGCAAAGGCTG > 6:213474/1‑149 CCGCTTCGGGCCAGCATCTGTTTGACCAGGTCGGCTGCAGAGAGCTTGTTGTCACCTGGCTCGACAGCCGCTTGTGCGTGTTCGCCTGGCGACAGCGCGTCGAACCAGCCCCGTGGCAAGCCTTCGATGCCCTCGATGCGGCGGGCCACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4299710‑4299561‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccacgGGGCTGGTTCGACGCGCTGTCGCCAGGCGAACACGCACAAGCGGCTGTCGAGCCAGGTGACAACAAGCTCTCTGCAGCCGACCTGGTCAAACAGATGCTGGCCCGAAGCGGCAAAGGTATCTCCGAAGAAACCCGGCAAAGGCTG > NC_002947/4299600‑4299744 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |