New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5237745 =	45 (0.830)	3 (0.060)	3/250	NT	6.7%	coding (205/387 nt)	PP_4614	hypothetical protein
	?	NC_002947	5237780 =	40 (0.770)					coding (240/387 nt)	PP_4614	hypothetical protein

GGGCGTCACGGGTCAGCGCGGCCAGCACTTGCAGGGGGTTCTGGCTGAGTTCGATCGCAAGGCCCAGGCGGATGCTGTCGATCACCCGTTGCAGGCGCACCGGGTCATTGCGTTGGGCCGGGGTGATGAGGCGCTTGGCGACCACGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5237895‑5237745 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcCCAACGCAATGACCCGGTGCGCCTGCAACGGGTGATCGACAGCATCCGCCTGGGCCTTGCGATCGAACTCAGCCAGAACCCCCTGCAAGTGCTGGCCGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTTTGTTGCCAATTGA  >  NC_002947/5237780‑5237927                                                                                                                                                                                                                                                                                                             GGGCGTCACGGGTCAGCGCGGCCAGCACTTGCAGGGGGTTCTGGCTGAGTTCGATCGCAAGGCCCAGGCGGATGCTGTCGATCACCCGTTGCAGGCGCACCGGGTCATTGCGTTGGGCCGGGGTGATGAGGCGCTTGGCGACCACGCCG                                                                                                                                                        <  8:206692/149‑1                                                                                                                GTTGGGCCGGGGTGATGAGGCGCTTGGCGACCACGCCGGCCCAACGCAATGACCCGGTGCGCCTGCAACGGGTGATCGACAGCATCCGCCTGGGCCTTGCGATCGAACTCAGCCAGAACCCCCTGCAAGTGCTGGCCGCGCTGACCCGT                                         >  5:250517/1‑149                                                                                                                      CCGGGGTGATGAGGCGCTTGGCGACCACGCCGGCCCAACGCAATGACCCGGTGCGCCTGCAACGGGTGATCGACAGCATCCGCCTGGGCCTTGCGA                                                                                        <  1:31395/96‑1                                                                                                                      CCGGGGTGATGAGGCGCTTGGCGACCACGCCGGCCCAACGCAATGACCCGGTGCGCCTGCAACGGGTGATCGACAGCATCCGCCTGGGCCTTGCGA                                                                                        >  2:31395/1‑96                                                                                                                                                   CCGGCCCAACGCAATGACCCGGTGCGCCTGCAACGGGTGATCGACAGCATCCGCCTGGGCCTTGCGATCGAACTCAGCCAGAACCCCCTGCAAGTGCTGGCCGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTTTGTTGCCAA      >  3:322678/1‑149                                                                                                                                                       CCCAACGCAATGACCCGGTGCGCCTGCAACGGGTGATCGACAGCATCCGCCTGGGCCTTGCGATCGAACTCAGCCAGAACCGCCTGCAAGTGCTGGCCGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTTTGTTGCCAATTGA  <  4:322678/149‑1                                                                                                                                                                                                                                                                                                             GGGCGTCACGGGTCAGCGCGGCCAGCACTTGCAGGGGGTTCTGGCTGAGTTCGATCGCAAGGCCCAGGCGGATGCTGTCGATCACCCGTTGCAGGCGCACCGGGTCATTGCGTTGGGCCGGGGTGATGAGGCGCTTGGCGACCACGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5237895‑5237745 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcCCAACGCAATGACCCGGTGCGCCTGCAACGGGTGATCGACAGCATCCGCCTGGGCCTTGCGATCGAACTCAGCCAGAACCCCCTGCAAGTGCTGGCCGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTTTGTTGCCAATTGA  >  NC_002947/5237780‑5237927

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.