New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5458249 =	45 (0.830)	4 (0.080)	4/254	NT	7.1%	coding (1981/2607 nt)	leuS	leucine‑‑tRNA ligase
	?	NC_002947	5458336 =	61 (1.150)					coding (2068/2607 nt)	leuS	leucine‑‑tRNA ligase

CTGACGTGAGCCTGAGCCAGACGCCAGACACGGCGCAGGAAGCGGCTGGCACCTTCGACGCCGGAGTCGGACCATTCCAGGCTCATGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5458337‑5458249 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcAGCCAGGGCCTGCCAGGCAAGCTGGATGTTGCCGCCCTGGACGACGCGCAAAAGGTCATCCGCCGCGCCATTCACGCTGCCATCAAGCAGGCCAGCACCGACGTGGGCCAGTTCCACAAGTTCAATACCGCCATCGCCCAGGTGA  >  NC_002947/5458336‑5458480                                                                                                                                                                                                                                            CTGACGTGAGCCTGAGCCAGACGCCAGACACGGCGCAGGAAGCGGCTGGCACCTTCGACGCCGGAGTCGGACCATTCCAGGCTCATGTCAGCCAGGGCCTGCCAGGCAAGCTGGATGTTGCCGCCCTGGACGACGCGCAAAAGGTCATC                                                                                       >  6:161665/1‑149                  CAGACGCCAGACACGGCGCAGGAAGCGGCTGGCACCTTCGACGCCGGAGTCGGACCATTCCAGGCTCATGTCAGCCAGGGCCTGCCAGGCAAGCTGGATGTTGCCGCCCTGGACGACGCGCAACAGGTCATCCGCCGCGCCATTCACGC                                                                      >  5:284830/1‑149                                  CGCAGGAAGCGGCTGGCACCTTCGACGCCGGAGTCGGACCATTCCAGGCTCATGTCAGCCAGGGCCTGCCAGGCAAGCTGGATGTTGCCGCCCTGGACGACGCGCAAAAGGTCATCCGCCGCGCCATTCACGCTGCCATCAAGCAGGCC                                                      <  5:161665/149‑1                                   GCAGGAAGCGGCTGGCACCTTCGACGCCGGAGTCGGACCATTCCAGGCTCATGTCAGCCAGGGCCTGCCAGGCAAGCTGGATGTTGCCGCCCTGGACGACGCGCAAAAGGTCATCCGCCGCGCCATTCACGCTGCCATCAAGCAGGCCA                                                     <  6:284830/149‑1                                                                                      cagCAGCCAGGGCCGGCCCTGCACGCTGGATGTTGCCGCCCTGGACGACGCGCAAAAGGTCATCCGCCGCGCCATTCACGCTGCCATCAAGCAGGCCAGCACCGACGTGGGCCAGTTCCACAAGTTCAATACCGCCATCGCCCAGGTGA  <  6:239077/146‑1                                                                                         CAGCCAGGGCCTGCCAGGCAAGCTGGATGTTGCCGCCCTGGACGACGCGCAAAAGGTCATCCGCCGCGCCATTCACGCTGCCATCAAGCAGGCCAGCACCGACGTGGGCCAGTTCC                                >  1:318906/1‑116                                                                                         CAGCCAGGGCCTGCCAGGCAAGCTGGATGTTGCCGCCCTGGACGACGCGCAAAAGGTCATCCGCCGCGCCATTCACGCTGCCATCAAGCAGGCCAGCACCGACGTGGGCCAGTTCC                                <  2:318906/116‑1                                                                                                                                                                                                                                            CTGACGTGAGCCTGAGCCAGACGCCAGACACGGCGCAGGAAGCGGCTGGCACCTTCGACGCCGGAGTCGGACCATTCCAGGCTCATGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5458337‑5458249 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcAGCCAGGGCCTGCCAGGCAAGCTGGATGTTGCCGCCCTGGACGACGCGCAAAAGGTCATCCGCCGCGCCATTCACGCTGCCATCAAGCAGGCCAGCACCGACGTGGGCCAGTTCCACAAGTTCAATACCGCCATCGCCCAGGTGA  >  NC_002947/5458336‑5458480

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.