New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5474944 = | 51 (0.940) | 5 (0.100) | 4/242 | NT | 11.2% | intergenic (‑150/‑156) | proA/PP_4812 | gamma‑glutamyl phosphate reductase/3‑methyladenine DNA glycosylase |
? | NC_002947 | 5475014 = | 32 (0.640) | intergenic (‑220/‑86) | proA/PP_4812 | gamma‑glutamyl phosphate reductase/3‑methyladenine DNA glycosylase |
CGGGGCAGTTCGTGGCTGGAGAGGCGGGGATGATAGCAATGAATGGCTTAATCGAGGCTGAATTGGACGGTGATGTTGGCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACACAAATCCCAGTGGGAGCGGGCGCGCCCGCTAAAGGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5475098‑5474944 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaagggccgGCACTGCCAACATCACCGTCCAATTCAGCCTCGATTAAGCCATTCATTGCTATCATCCCCGCCTCTCCAGCCACGAACTGCCCCGCATGCCAGCCCTGCCCGACAGCTTTTTCGACCGCGACGCCCAGACCCTGGCCAAGGCC > NC_002947/5475014‑5475156 CGGGGCAGTTCGTGGCTGGAGAGGCGGGGATGATAGCAATGAATGGCTTAATCGAGGCTGAATTGGACGGTGATGTTGGCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACACAAATCCCAGTGGGAGCGGGCGCGCCCGCTAA < 3:78421/148‑1 GGCCCTTTCGCGGGTAAACCCGCTCCTACACAAATCCCAGTGGGAGCGGGCGCGCCCGCTAAAGGGCCGGCACTGCCAACATCACCGTCCAATTCAGCCTCGATTAAGCCATTCATTGCTATCATCCCCGCCTCTCCAGCCACGAACTG > 8:129872/1‑149 GGCCCTTTCGCGGGTAAACCCGCTCCTACACAAATCCCAGTGGGAGCGGGCGCGCCCGCTAAAGGGCCGGCACTGCCAACATCACCGTCCAATTCAGCCTCGATTAAGCCATTCATTGCTATAATCCCCGCCTCTCCAGCCCCGACCTG > 4:72791/1‑149 GCCCTTTCGCGGGTAAACCCGCTCCTACACAAATCCCAGTGGGAGCGGGCGCGCCCGCTAAAGGGCCGGCACTGCCAACATCACCGTCCAATTCAGCCTCGATTAAGCCATTCATTGCTATCATCCCCGCCTCTCCAGCCACGAACTGC > 2:55856/1‑149 GCGGGTAAACCCGCTCCTACACAAATCCCAGTGGGAGCGGGCGCGCCCGCTAAAGGGCCGGCACTGCCAACATCACCGTCCAATTCAGCCTCGATTAAGCCATTCATTGCTATCATCCCCGCCTCTCCAGCCACGAACTGCCCCGCAT < 7:129872/148‑1 AATCCCAGTGGGAGCGGGCGCGCCCGCTAAAGGGCCGGCACTGCCAACATCACCGTCCAATTCAGCCTCGATTAAGCCATTCATTGCTATCATCCCCGCCTCTCCAGCCACGTACTGCCCCGCATGCCAGCCCTGCCCGACAGCTTTTT < 1:55856/149‑1 CCGCTAAAGGGCCGGCACTGCCAACTTCACCGTCCAATTCAGCCTCGATTAAGCCATTCATTGCTATCATCCCCGCCTCTCCAGCCACGAACTGCCCCGCTTGCCAGCCGTGCCCGACAGCATTTTCGACCGCGACGCCCAGACCCTGG < 1:190356/149‑1 GGGCCGGCACTGCCAACATCACCGTCCAATTCAGCCTCGATTAAGCCATTCATTGCTATCATCCCCGCCTCTCCAGCCACGAACTGCCCCGCATGCCAGCCCTGCCCGACAGCTTTTTCGACCGCGACGCCCAGACCCTGGCCAAGGCC < 8:235661/149‑1 CGGGGCAGTTCGTGGCTGGAGAGGCGGGGATGATAGCAATGAATGGCTTAATCGAGGCTGAATTGGACGGTGATGTTGGCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACACAAATCCCAGTGGGAGCGGGCGCGCCCGCTAAAGGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5475098‑5474944 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaagggccgGCACTGCCAACATCACCGTCCAATTCAGCCTCGATTAAGCCATTCATTGCTATCATCCCCGCCTCTCCAGCCACGAACTGCCCCGCATGCCAGCCCTGCCCGACAGCTTTTTCGACCGCGACGCCCAGACCCTGGCCAAGGCC > NC_002947/5475014‑5475156 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |