New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5873510 = | 45 (0.830) | 4 (0.080) | 4/246 | NT | 8.3% | coding (215/657 nt) | PP_5147 | haloacid dehalogenase‑like family hydrolase |
? | NC_002947 | 5873556 = | 46 (0.900) | coding (261/657 nt) | PP_5147 | haloacid dehalogenase‑like family hydrolase |
CCGGGCGATCGGTGCGGTGACGAAGCGGTTGGTAGCGGTGATGATCACCAGCTGGTCGCCCGCCTCGCGGTGCTGCTGCAGCAAGGCCAGGGCCTTGGGCAGGACGATGGGCTCGATGCAGTCGCGCATGAAGTCGCGGTGCCACTCGTCGAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5873664‑5873510 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgagccCATCGTCCTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTCACCGCACCGATCGCCCGGCGCCTGGGGGTGCGGGTGTTGCTGGCAACCGAATG > NC_002947/5873556‑5873699 CCGGGCGATCGGTGCGGTGACGAAGCGGTTGGTAGCGGTGATGATCACCAGCTGGTCGCCCGCCTCGCGGTGCTGCTGCAGCAAGGCCAGGGCCTTGGGCAGGACGATGGGCTCGATGCAGTCGCGCATGAAGTCGCGCTGCCACTCGT > 6:23467/1‑149 CCGGGCGATCGGTGCGGTGACGAAGCGGTTGGTAGCGGTGATGATCACCAGCTGGTCGCCCGCCTCGCGGTGCTGCTGCAGCAAGGCCAGGGCCTTGGGCAGGACGATGGGCTCGATGCAGTCGCGCATGAAGGCGCGGTGCCACTCGT < 1:321217/149‑1 GGCGATCGGTGCGGTGACGAAGCGGTTGGTAGCGGTGATGATCACCAGCTGGTCGCCCGCCTCGCGGTGCTGCTGCAGCAAGGCCAGGGCCTTGGGCAGGACGATGGGCTCGATGCAGTCGCGCATGAAGTCGCGGTGCCACTCGTCGA < 4:93711/149‑1 TGGGCTCGATGCAGTCGCGCATGAAGTCGCGGTGCCACTCGTCGAGCCCATCGTCCTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTCACCGCACCGA > 1:139465/1‑149 GCTCGATGCAGTCGCGCATGAAGTCGCGGTGCCACTCGTCGAGCCCATCGTCCTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGC > 5:265414/1‑97 GCTCGATGCAGTCGCGCATGAAGTCGCGGTGCCACTCGTCGAGCCCATCGTCCTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGC < 6:265414/97‑1 AAGTCGCGGTGCCACTCGTCGAGCCCATCGTCCTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTCACCGCACCGATCGCCCGGCGCCTGGGGGTGCGG < 2:139465/149‑1 GAGCCCATCGTCCTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTCACCGCACCGATCGCCCGGCGCCTGGGGGTGCGGGTGTTGCTGGCAACCGAATG < 4:220888/149‑1 GAGCCCATCGTCCTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTCACCGCACCGATCGCCCGGCGCCTGGGGGTGCGGGTGTTGCTGGCAACCGAAT < 2:321217/148‑1 CCGGGCGATCGGTGCGGTGACGAAGCGGTTGGTAGCGGTGATGATCACCAGCTGGTCGCCCGCCTCGCGGTGCTGCTGCAGCAAGGCCAGGGCCTTGGGCAGGACGATGGGCTCGATGCAGTCGCGCATGAAGTCGCGGTGCCACTCGTCGAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5873664‑5873510 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgagccCATCGTCCTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTCACCGCACCGATCGCCCGGCGCCTGGGGGTGCGGGTGTTGCTGGCAACCGAATG > NC_002947/5873556‑5873699 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |