New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5873510 =	45 (0.830)	4 (0.080)	4/246	NT	8.3%	coding (215/657 nt)	PP_5147	haloacid dehalogenase‑like family hydrolase
	?	NC_002947	5873556 =	46 (0.900)					coding (261/657 nt)	PP_5147	haloacid dehalogenase‑like family hydrolase

CTATCTTTGCGAGCGCGGCATTCTCGACCCGGTCGCCTACAAGCAACGCAACGACAGCTTCTACCAGGATTACCTCAATGGCACCCTGGACCTGCAGGCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGC‑CCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTCCTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTCACCGCACCGA  >  NC_002947/5873364‑5873656                                                                                                                                                    |                                                                                                                                                   cTATCTTTGCGAGCGCGGCATTCTCGACCCGGTCGCCTACAAGCAACGCAACGACAGCTTCTACCAGGATTACCTCAATGGCACCCTGGACCTGCAGGCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGC‑CCGGc                                                                                                                                                  <  7:90238/149‑1 (MQ=255)    cattcggttgccagcaacacccgcacccccaggcgccgggcgatcggtgcggtgacgaagcggttggtagcggtgatgatcaccagctggtcgcccgcctcgcggtgctgctgcagcaaggccagggccttgggcaggacgatgGGCTc                                                                                                                                                <  4:220888‑M1/5‑1 (MQ=255)     attcggttgccagcaacacccgcacccccaggcgccgggcgatcggtgcggtgacgaagcggttggtagcggtgatgatcaccagctggtcgcccgcctcgcggtgctgctgcagcaaggccagggccttgggcaggacgatgGGCTc                                                                                                                                                <  2:321217‑M1/5‑1 (MQ=255)                cgGCATTCTCGACCCGGTCGCCTACAAGCAACGCAACGACAGCTTCTACCAGGATTACCTCAATGGCACCCTGGACCTGCAGGCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGC‑CCGGCTcga                                                                                                                                              <  8:34432/138‑1 (MQ=255)                cgGCATTCTCGACCCGGTCGCCTACAAGCAACGCAACGACAGCTTCTACCAGGATTACCTCAATGGCACCCTGGACCTGCAGGCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGC‑CCGGCTcga                                                                                                                                              >  7:34432/1‑138 (MQ=255)                        tcGACCCGGTCGCCTACAAGCAACGCAACGACAGCTTCTACCAGGATTACCTCAATGGCACCCTGGACCTGCAGGCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGC‑CCGGCTc                                                                                                                                                >  7:177083/1‑128 (MQ=255)                        tcGACCCGGTCGCCTACAAGCAACGCAACGACAGCTTCTACCAGGATTACCTCAATGGCACCCTGGACCTGCAGGCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGC‑CCGGCTc                                                                                                                                                <  8:177083/128‑1 (MQ=255)                        tcGACCCGGTCGCCTACAAGCAACGCAACGACAGCTTCTACCAGGATTACCTCAATGGCACCCTGGACCTGCAGGCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGC‑CCGGCTCGACGAGt                                                                                                                                         <  6:340395/135‑1 (MQ=255)                        tcGACCCGGTCGCCTACAAGCAACGCAACGACAGCTTCTACCAGGATTACCTCAATGGCACCCTGGACCTGCAGGCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGC‑CCGGCTCGACGAGt                                                                                                                                         >  5:340395/1‑135 (MQ=255)                        tcGACCCGGTCGCCTACAAGCAACGCAACGACAGCTTCTACCAGGATTACCTCAATGGCACCCTGGACCTGCAGGCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGC‑CCGGCTCGACGAGTGGCACCGCGCCtt                                                                                                                            >  2:84437/1‑148 (MQ=255)                        tagccccGGTCGCCTACATGCGGCGCAACGACAGCTTCTACCAGGATTGCCTCACTGGCACCCAGGACCTGCCGGCCTACCTGGCCTTTTGCATGGAGAGCCTGGCGGCTACACCCATGGC‑CCGGCTCGCCGAGTGGCACCGCGACtt                                                                                                                            >  8:173257/5‑148 (MQ=255)                        ccgcacccccaggcgccgggcgatcggtgcggtgacgaagcggttggtagcggtgatgatcaccagctggtcgcccgcctcgcggtgctgctgcagcaaggccagggccttgggcaggacgatgGGCTCGACGAGTGGCACCGCGACtt                                                                                                                            <  2:139465‑M1/25‑1 (MQ=255)                                   gCCTACAAGCAACGCAACGACAGCTTCTACCAGGATTACCTCAATGGCACCCTGGACCTGCAGGCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGC‑CCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTg                                                                                                                >  8:310147/1‑149 (MQ=255)                                       aCAAGCAACGCAACGACAGCTTCTACCAGGATTACCTCAATGGCACCCTGGACCTGCAGGCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGC‑CCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATc                                                                                                            >  2:327636/1‑149 (MQ=255)                                          aGCAACGCAACGACAGCTTCTACCAGGATTACCTCAATGGCCCCCTGGACCTGCAGGCCTACCTGGGCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGC‑CCGGCTCGCAGAGTGGCACCGCGACTGCATGCGCGACTGACTCGAg                                                                                                         >  8:271415/1‑149 (MQ=255)                                               tcggtgcggtgacgaagcggttggtagcggtgatgatcaccagctggtcgcccgcctcgcggtgctgctgcagcaaggccagggccttgggcaggacgatgGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCa                                                                                                     >  1:139465‑M1/102‑149 (MQ=255)                                                 caacgACAGCTTCTACCAGGATTACCTCAATGGCACCCTGGACCTGCAGGCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGCGCCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCAGCGAGCCCATc                                                                                                   <  1:85342/149‑1 (MQ=255)                                                                ccAGGATTACCTCAATGGCACCCTGGACCTGCAGGCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGC‑CCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTCCTGCCCAAGGccc                                                                                   >  8:226682/1‑149 (MQ=255)                                                                  aGGATTACCTCAATGGCACCCTGGACCTGCAGGCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGC‑CCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTCCTGCCCAAGGCCCTg                                                                                 <  7:226682/149‑1 (MQ=255)                                                                     aTTACCTCAATGGCACCCTGGACCTGCAGGCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGC‑CCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTCCTGCCCAAGGCCCTGGcc                                                                              <  8:184262/149‑1 (MQ=255)                                                                      ttACCTCAATGGCACCCTGGACCTGCAGGCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGC‑CCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTCCTGCCCAAGGCCCTGGCCt                                                                             <  1:252678/149‑1 (MQ=255)                                                                         ccTCAATGGCACCCTGGACCTGCAGGCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGC‑CCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTTCTGCCCAAGGCCAGGGCCTtgg                                                                          <  7:260211/149‑2 (MQ=255)                                                                         ccTAAATGGCACCCTGGACCTGCCGGCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGC‑CCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTCCTGCCCAAGGCCCTGGCCTtg                                                                           <  3:39854/148‑1 (MQ=255)                                                                           tCAATGGCACCCTGGACCTGCAGGCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGC‑CCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTCCTGCCCAAGGCCCTGGCCTtgctg                                                                        >  2:323031/1‑149 (MQ=255)                                                                           tCAATGGCACCCTGGACCTGCAGGCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGC‑CCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTCCTGCCCAAGGCCCTGGCCTtgctg                                                                        >  1:45343/1‑149 (MQ=255)                                                                            cAATGGCACCCTGGACCTGCAGGCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGC‑CCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTCCTGCCCAAGGCCCTGGCCTtgctgc                                                                       <  7:173257/149‑1 (MQ=255)                                                                             aaTGGCACCCTGGACCTGCAGGCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGC‑CCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTCCTGCCCAAGGCCCTGGCCTTGCTgca                                                                      <  7:310147/149‑1 (MQ=255)                                                                                  cACCCTGGACCTGCAGGCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGC‑CCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTCCTGCCCAAGGCCCTGGCCTTGCTgcagcag                                                                  >  8:122819/1‑148 (MQ=255)                                                                                     ccTGGACCTGCAGGCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGC‑CCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTCCTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCAcc                                                              >  7:147809/1‑149 (MQ=255)                                                                                     ccTGGACCTGCAGGCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGC‑CCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCACTCGTCCTGCCCAAGGCCCTGGCCTTGCTgcagcagcaac                                                              >  8:269290/1‑147 (MQ=255)                                                                                               cAGGCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGC‑CCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTCCTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAggcggg                                                    <  7:271415/149‑1 (MQ=255)                                                                                                gcccgcctcgcggtgctgctgcagcaaggccagggccttgggcaggacgatgGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGc                                                                                                        <  6:265414‑M1/45‑1 (MQ=255)                                                                                                gcccgcctcgcggtgctgctgcagcaaggccagggccttgggcaggacgatgGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGc                                                                                                        >  5:265414‑M1/53‑97 (MQ=255)                                                                                                  gCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGC‑CCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTCCTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGa                                                 >  1:39405/1‑149 (MQ=255)                                                                                                   ccTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGC‑CCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTCCTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGAc                                                <  7:269290/149‑1 (MQ=255)                                                                                                        cTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGC‑CCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTCCTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCt                                           >  6:298578/1‑149 (MQ=255)                                                                                                         tGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGC‑CCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTCCTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTg                                          >  4:152691/1‑149 (MQ=255)                                                                                                         tGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGC‑CCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTCCTGCCCAAGGCCAGGGCCTtgggcag                                                                      <  5:50080/121‑6 (MQ=255)                                                                                                           gCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGC‑CCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTCCTGCTCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTgg                                         <  1:84437/148‑1 (MQ=255)                                                                                                                   cATGGAGATCCTGGCGGCAACACCCATGGC‑CCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTCCTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGAtcatca                                <  1:323031/149‑1 (MQ=255)                                                                                                                    aTGGAGATCCTGGCGGCAACACCCATGGC‑CCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTCCTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCAc                               >  7:18066/1‑149 (MQ=255)                                                                                                                    aTGGAGATCCTGGCGGCAACACCCATGGC‑CCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTCCTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCAc                               >  3:287390/1‑149 (MQ=255)                                                                                                                        agaTCCTGGCGGCAACACCCATGGC‑CCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTCCTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGatc                                    <  4:286574/140‑1 (MQ=255)                                                                                                                        agaTCCTGGCGGCAACACCCATGGC‑CCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTCCTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGatc                                    >  3:286574/1‑140 (MQ=255)                                                                                                                          aTCCTGGCGGCAACACCCATGGC‑CCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTCCTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTAc                         <  8:147809/149‑1 (MQ=255)                                                                                                                            ccTGGCGGCAACACCCATGGC‑CCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTCCTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTAcc                        >  8:243536/1‑148 (MQ=255)                                                                                                                              tGGCGGCAACACCCATGGC‑CCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTCCTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAAc                     >  8:220903/1‑149 (MQ=255)                                                                                                                                        acCCATGGC‑CCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTCCTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTAc                         <  7:65779/135‑1 (MQ=255)                                                                                                                                        acCCATGGC‑CCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTCCTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTAc                         >  8:65779/1‑135 (MQ=255)                                                                                                                                        acCCATGGC‑CCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTCCTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTca           >  5:23467/1‑149 (MQ=255)                                                                                                                                         cccATGGC‑CCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTCCTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGTTCATCACCGCTACCAACCGCTTCGTcac          >  3:220888/1‑149 (MQ=255)                                                                                                                                          ccATGGC‑CCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTCCTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCCCCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTcacc         >  5:3794/1‑149 (MQ=255)                                                                                                                                           cATGGC‑CCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTCCTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTcaccg        >  1:327307/1‑149 (MQ=255)                                                                                                                                           cATGGC‑CCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCACATCGTCCTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTcaccg        >  1:262523/1‑149 (MQ=255)                                                                                                                                               gC‑CCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTCCTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTcaccgcac     <  2:45343/148‑1 (MQ=255)                                                                                                                                               gC‑CCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTCCATCGAGCCCATCGTCCTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTcaccgcac     <  5:298578/148‑1 (MQ=255)                                                                                                                                                  ccGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTCCTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCCTCACCGCTACCAACCGCTTCGTCACCGCACCGa  >  8:253972/1‑149 (MQ=255)                                                                                                                                                  ccGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTCCTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTCACCGCACCGa  <  1:327636/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                   CTATCTTTGCGAGCGCGGCATTCTCGACCCGGTCGCCTACAAGCAACGCAACGACAGCTTCTACCAGGATTACCTCAATGGCACCCTGGACCTGCAGGCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGC‑CCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTCCTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTCACCGCACCGA  >  NC_002947/5873364‑5873656

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.