New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4272 =	61 (1.130)	4 (0.080)	4/254	NT	5.9%	coding (110/1896 nt)	trmF	tRNA uridine 5‑carboxymethylaminomethyl modification protein
	?	NC_002947	4308 =	68 (1.290)					coding (74/1896 nt)	trmF	tRNA uridine 5‑carboxymethylaminomethyl modification protein

GTTCAGAACGCGGAACTGGATGCCGCTCTTGTCGGTGGCCAGCGCCATGGCGCCGCCGAGCGCATCGATCTCTTTGACCAGATGGCTTTTGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCCTCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACGGGAAGGGAAATCCACCACGCACCTCGTGCCTGTTTTTGCGAATAGAGAAGGTAAGCG  >  NC_002947/4124‑4420                                                                                                                                                     |                                                                                                                                                       gtttctttactgggggggaagtccctatacttgtccgcttaccttctctattcgcaaaaacaggcacgaggtgcgtggtggatttcccttcccgttttgacgtgatcgtcatcggcggcggccatgccggtaccgaggctgcgcttgcg                                                                                                                                                        <  5:134937‑M1/1‑1 (MQ=255)  ttCAGAACGCGGAACTGGATGCCGCTCTTGTCGGTGGCCAGCGCCATGGCGCCGCCGAGCGCATCGATCTCTTTGACCAGATGGCTTTTGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATggg                                                                                                                                                        <  8:102014/148‑1 (MQ=255)       aaCGGGTAACTGTATGCCGGTGTTGTGGGTGGCATGGGCAATGGGGCGGCGTTGGGATTCTATCTTTTTTACCATATGGCTTTTGCAAATACCGCGCATGGGGGGGTTGATGCTAATGTTACCCTGGG‑TTCCACGTTATGGGTcagcag                                                                                                                                                 <  4:170806/149‑1 (MQ=255)            ggAACTGGATGCCGCTCTTGTCGGTGGCCAGCGCCATGGCGCCGCCGAGCGCATCGATCTCTTTGACCAGATGGCTTTTGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTcagcagca                                                                                                                                               <  1:110522/147‑1 (MQ=255)            ggAACTGGATGCCGCTCTTGTCGGTGGCCAGCGCCATGGCGCCGCCGAGCGCATCGATCTCTTTGACCAGATGGCTTTTGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTcagcagca                                                                                                                                               >  2:110522/1‑147 (MQ=255)                   gATGCCGCTCTTGTCGGTGGCCAGCGCCATGGCGCCGCCGAGCGCATCGATCTCTTTGACCAGATGGCTTTTGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTca                                                                                                                                      <  3:57131/149‑1 (MQ=255)                   gATGCCGCTCTTGTCGGTGGCCAGCGCCATGGCGCCGCCGAGCGCATCGATCTCTTTGACCAGATGGCTTTTGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTca                                                                                                                                      >  3:184350/1‑149 (MQ=255)                     tGCCGCTCTTGTCGGTGGCCAGCGCCATGGCGCCGCCGAGCGCATCGATCTCTTTGACCAGATGGCTTTTGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTcaca                                                                                                                                    <  6:110354/149‑1 (MQ=255)                        cGCTCTTGTCGGTGGCCAGCGCCATGGCGCCGCCGAGCGCATCGATCTCTTTGACCAGATGGCTTTTGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACAcc                                                                                                                                  >  4:1987/1‑148 (MQ=255)                          ctctTGTCGGTGGCCAGCGCCATGGCGCCGCCGAGCGCATCGATCTCTTTGACCAGATGGCTTTTGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCAt                                                                                                                               <  6:59320/149‑1 (MQ=255)                                 cGGTGGCCAGCGCCATGGCGCCGCCGAGCGCATCGATCTCTTTGACCAGATGGCTTTTGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTg                                                                                                                          >  1:340066/1‑147 (MQ=255)                                  ggTGGCCAGCGCCATGGCGCCGCCGAGCGCATCGATCTCTTTGACCAGATGGCTTTTGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTg                                                                                                                          >  4:280695/1‑146 (MQ=255)                                        cAGCGCCATGGCGCCGCCGAGCGCATCGATCTCTTTGACCAGATGGCTTTTGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGc                                                                                                                   >  1:278649/1‑147 (MQ=255)                                            ttctctattcgcaaaaacaggcacgaggtgcgtggtggatttcccttcccgttttgacgtgatcgtcatcggcggcggccatgccggtaccgaggctgcgcttgcGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGAc                                                                                                                     <  5:89648‑M1/36‑1 (MQ=255)                                            ttctctattcgcaaaaacaggcacgaggtgcgtggtggatttcccttcccgttttgacgtgatcgtcatcggcggcggccatgccggtaccgaggctgcgcttgcGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGAc                                                                                                                     >  6:89648‑M1/106‑141 (MQ=255)                                             ccATGGCGCCGCCGAGCGCATCGATCTCTTTGACCAGATGGCTTTTGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCa                                                                                                            <  3:158092/149‑1 (MQ=255)                                                  gcgcCGCCGAGCGCATCGATCTCTTTGACCAGATGGCTTTTGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCCTc                                                                                                       >  7:7711/1‑149 (MQ=255)                                                   cgccgcCGAGCGCATCGATCTCTTTGACCAGATGGCTTTTGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCCTCg                                                                                                      >  8:60768/1‑149 (MQ=255)                                                    gccgccGAGCGCATCGATCTCTTTGACCAGATGGCTTTTGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCCTCgg                                                                                                     <  5:132461/149‑1 (MQ=255)                                                        ccgAGCGCATCGATCTCTTTGACCAGATGGCTTTTGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCCTCGGTAcc                                                                                                 <  2:278649/149‑1 (MQ=255)                                                          gAGCGCATCGATCTCTTTGACCAGATGGCTTTTGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACAccc                                                                                                                                 >  2:197703/1‑115 (MQ=255)                                                          aaacaggcacgaggtgcgtggtggatttcccttcccgttttgacgtgatcgtcatcggcggcggccatgccggtaccgaggctgcgcttgcGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAg                                                                                                                >  3:40120‑M1/92‑132 (MQ=255)                                                          aaacaggcacgaggtgcgtggtggatttcccttcccgttttgacgtgatcgtcatcggcggcggccatgccggtaccgaggctgcgcttgcGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAg                                                                                                                <  4:40120‑M1/41‑1 (MQ=255)                                                                aTCGATCTCTTTGACCAGATGGCTTTTGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCCTCGGTACCGGCATG‑‑gc                                                                                       >  6:134937/1‑149 (MQ=255)                                                                  cGATCTCTTTGACCAGATGGCTTTTGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCCTCGGTAc                                                                                                  <  8:263481/138‑1 (MQ=255)                                                                  cGATCTCTTTGACCAGATGGCTTTTGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCAACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCCTCGGTAc                                                                                                  >  7:263481/1‑138 (MQ=255)                                                                       tctTTGACCAGATGGCTTTTGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCCTCGGTACCgg                                                                                               <  8:70013/136‑1 (MQ=255)                                                                       tctTTGACCAGATGGCTTTTGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCCTCGGTACCGGCATG‑‑gccgccgcc                                                                                >  7:253290/1‑149 (MQ=255)                                                                       tctTTGACCAGATGGCTTTTGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCCTCGGTACCGGCATG‑‑gccgccgc                                                                                 >  6:190270/1‑148 (MQ=255)                                                                         tttGACCAGATGGCTTTTGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCCTCGGTACCGGCATG‑‑gccgc                                                                                    <  6:139239/143‑1 (MQ=255)                                                                           tGACCAGATGGCTTTTGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCCTCGGTACCGGCATG‑‑GCCGCCGCCGa                                                                              <  3:280695/147‑1 (MQ=255)                                                                           tGACCAGATGGCTTTTGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCCTCGGTACCGGCATG‑‑GCCGCCGCCGAt                                                                             <  8:253290/148‑1 (MQ=255)                                                                           tGACCAGATGGCTTTTGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCCTCGGTACCGGCATG‑‑GCCGCCGCCGAt                                                                             <  2:340066/148‑1 (MQ=255)                                                                             aCCAGATGGCTTTTGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCCTCGGTACCGGCATG‑‑GCCGCCGCCGATGAc                                                                          <  3:1987/149‑1 (MQ=255)                                                                              ccAGATGGCTTTTGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCCTCGGTACCGGCATG‑‑GCCGCCGCCGATGACg                                                                         <  8:7711/149‑1 (MQ=255)                                                                              ccAGATGGCTTTTGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGATATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCCTCGGTACCGGCATG‑‑GCAGCCGCCGATGAc                                                                          >  6:208114/1‑148 (MQ=255)                                                                               cAGATGGCTTTTGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCCTCGGTACCGGCATG‑‑GCCGCCGCCGATGACGa                                                                        >  2:103200/1‑149 (MQ=255)                                                                                aGATGGCTTTTGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCCTCGGTACCGGCATG‑‑GCCGCCGCCGATGACGAt                                                                       <  5:72764/149‑1 (MQ=255)                                                                                 gATGGCTTTTGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCCTCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATc                                                                      <  4:114874/149‑1 (MQ=255)                                                                                        tttGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCCTCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCa                                                                >  1:321828/1‑148 (MQ=255)                                                                                         ttGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCCTCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACggc                                                                 >  8:210137/1‑144 (MQ=255)                                                                                         ttGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCCTCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTc                                                                 <  7:210137/146‑1 (MQ=255)                                                                                            ccAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCCTCGGTACCGGCATG‑‑GCCGCCGCCGATGACGAt                                                                       <  6:99177/137‑1 (MQ=255)                                                                                            ccAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCCTCGGTACCGGCATG‑‑GCCGCCGCCGATGACGAt                                                                       >  5:99177/1‑137 (MQ=255)                                                                                             cAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCCTCGGTACCGGCATg                                                                                           <  8:280851/118‑1 (MQ=255)                                                                                             cAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCCTCGGTACCGGCATg                                                                                           >  7:280851/1‑118 (MQ=255)                                                                                              aaTACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCCTCGGTACCGGCATG‑‑GCCGCCGCCTATGACGATCACGTCAAAACggg                                                         <  5:190270/149‑1 (MQ=255)                                                                                                 aCCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCCTCGGTACCGGCATG‑‑gccg                                                                                     >  8:65216/1‑118 (MQ=255)                                                                                                 aCCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCCTCGGTACCGGCATG‑‑gccg                                                                                     <  7:65216/118‑1 (MQ=255)                                                                                                                    cAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCCTCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACgggaag                                                      >  7:199340/1‑130 (MQ=255)                                                                                                                    cAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCCTCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACgggaag                                                      <  8:199340/130‑1 (MQ=255)                                                                                                                      gCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCCTCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACgggaagg                                                     <  3:212386/129‑1 (MQ=255)                                                                                                                      gCTCATGTGAACGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCCTCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACgggaagg                                                     >  4:212386/1‑129 (MQ=255)                                                                                                                           tgtgACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCCTCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACGGGAAGGGAAATCCACCACGCACCTCGTGCCt                            >  7:107064/1‑149 (MQ=255)                                                                                                                           tgtgACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCCTCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACGGGAAGGGAAATCCACCACGCACCTCGTGCCt                            <  8:107064/149‑1 (MQ=255)                                                                                                                            gtgACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCCTCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACGGGAAGGGAAATCCACCACGCACCTCGTGCCTg                           >  1:166761/1‑149 (MQ=255)                                                                                                                               aCCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCCTCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACGGGAAGGGAAATCCACCACGCACCTCGTGCCTGttt                        >  5:35881/1‑149 (MQ=255)                                                                                                                                 cGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCCTCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACGGGAAGGGAAATCCACCACGCACCTCGTGCCTGttttt                      >  6:121705/1‑149 (MQ=255)                                                                                                                                  gAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCCTCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACGGGAAGGGAAATCCACCACGCACCTCGTGCCTGTTTTTg                     <  5:121705/149‑1 (MQ=255)                                                                                                                                   aGGTTTTCCACGTTTTGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCCTCGGTACCGGCATGCTCCCGCCGCCGATGACGATCACGTCAAAACGGGAAGGGAAATCCACCACGCACCTCGTGCCTGttttt                      <  1:103200/149‑1 (MQ=255)                                                                                                                                   aGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCCTCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACGGGAAGGGAAATCCACCACGCACCTCGTGCCTGTTTTTGc                    <  7:60768/149‑1 (MQ=255)                                                                                                                                       tttCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCCTCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTc                                                                 >  3:172741/1‑100 (MQ=255)                                                                                                                                       tttCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCCTCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTc                                                                 <  4:172741/100‑1 (MQ=255)                                                                                                                                        ttCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCCTCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACGGGAAGGGAAATCCACCACGCACCTCGTGCCTGTTTTTGAGAATa               >  4:15510/1‑149 (MQ=255)                                                                                                                                           cACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCCTCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACGGGAAGGGAAATCCACCACGCACCTCCTGCCTGTTTTTGCGAATa               >  1:153113/1‑146 (MQ=255)                                                                                                                                            aCGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCCTCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACGGGAAGGGAAATCCACCACGCACCTCGTGCCTGTTTTTGCGAATAgaga           <  6:35881/149‑1 (MQ=255)                                                                                                                                              gTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCCTCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACGGGAAGGGAAATCCACCACGCACCTCGTGCCTGTTTTTGCGAATAGAGAAg         >  5:117444/1‑149 (MQ=255)                                                                                                                                                  tGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCCTCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACGGGAAGGGAAATCCACCACGCACCTCGTGCCTGTTTTTGCGAATAGAGAAGGt       >  8:218770/1‑147 (MQ=255)                                                                                                                                                     GTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCCTCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACGGGAAGGGAAATCCACCACGCACCTCGTGCCTGTTTTTGCGAATAGAGAAGGTAAGCg  <  5:17876‑M1/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                       GTTCAGAACGCGGAACTGGATGCCGCTCTTGTCGGTGGCCAGCGCCATGGCGCCGCCGAGCGCATCGATCTCTTTGACCAGATGGCTTTTGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCCTCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACGGGAAGGGAAATCCACCACGCACCTCGTGCCTGTTTTTGCGAATAGAGAAGGTAAGCG  >  NC_002947/4124‑4420

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.