New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4272 =	61 (1.130)	4 (0.080)	4/254	NT	5.9%	coding (110/1896 nt)	trmF	tRNA uridine 5‑carboxymethylaminomethyl modification protein
	?	NC_002947	4308 =	68 (1.290)					coding (74/1896 nt)	trmF	tRNA uridine 5‑carboxymethylaminomethyl modification protein

CAGCGCCATGGCGCCGCCGAGCGCATCGATCTCTTTGACCAGATGGCTTTTGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACGGGAAGGGAAATCCACCACGCACCTCGTGCCTGTTTTTGCGAATAGAGAAGGTAAGCGGACAAGTATAGGGACTTCCCCCCCAGTAAAGAAAC  >  NC_002947/4163‑4455                                                                                                                                                  |                                                                                                                                                       cAGCGCCATGGCGCCGCCGAGCGCATCGATCTCTTTGACCAGATGGCTTTTGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGc                                                                                                                                                       >  1:278649/1‑147 (MQ=255)      ccATGGCGCCGCCGAGCGCATCGATCTCTTTGACCAGATGGCTTTTGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCa                                                                                                                                                <  3:158092/149‑1 (MQ=255)           gcgcCGCCGAGCGCATCGATCTCTTTGACCAGATGGCTTTTGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCC‑Tc                                                                                                                                          >  7:7711/1‑149 (MQ=255)            cgccgcCGAGCGCATCGATCTCTTTGACCAGATGGCTTTTGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCC‑TCg                                                                                                                                         >  8:60768/1‑149 (MQ=255)             gccgccGAGCGCATCGATCTCTTTGACCAGATGGCTTTTGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCC‑TCgg                                                                                                                                        <  5:132461/149‑1 (MQ=255)                 ccgAGCGCATCGATCTCTTTGACCAGATGGCTTTTGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCC‑TCGGTAcc                                                                                                                                    <  2:278649/149‑1 (MQ=255)                   aaacaggcacgaggtgcgtggtggatttcccttcccgttttgacgtgatcgtcatcggcggcggccatgccggtaccgaggctgcgcttgcGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAg                                                                                                                                                    <  4:40120‑M1/41‑1 (MQ=255)                   aaacaggcacgaggtgcgtggtggatttcccttcccgttttgacgtgatcgtcatcggcggcggccatgccggtaccgaggctgcgcttgcGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAg                                                                                                                                                    >  3:40120‑M1/92‑132 (MQ=255)                         aTCGATCTCTTTGACCAGATGGCTTTTGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑gc                                                                                                                          >  6:134937/1‑149 (MQ=255)                           cGATCTCTTTGACCAGATGGCTTTTGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCC‑TCGGTAc                                                                                                                                     <  8:263481/138‑1 (MQ=255)                           cGATCTCTTTGACCAGATGGCTTTTGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCAACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCC‑TCGGTAc                                                                                                                                     >  7:263481/1‑138 (MQ=255)                                tctTTGACCAGATGGCTTTTGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCC‑TCGGTACCgg                                                                                                                                  <  8:70013/136‑1 (MQ=255)                                tctTTGACCAGATGGCTTTTGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑gccgccgcc                                                                                                                   >  7:253290/1‑149 (MQ=255)                                tctTTGACCAGATGGCTTTTGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑gccgccgc                                                                                                                    >  6:190270/1‑148 (MQ=255)                                  tttGACCAGATGGCTTTTGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑gccgc                                                                                                                       <  6:139239/143‑1 (MQ=255)                                    tGACCAGATGGCTTTTGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑GCCGCCGCCGa                                                                                                                 <  3:280695/147‑1 (MQ=255)                                    tGACCAGATGGCTTTTGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑GCCGCCGCCGAt                                                                                                                <  2:340066/148‑1 (MQ=255)                                    tGACCAGATGGCTTTTGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑GCCGCCGCCGAt                                                                                                                <  8:253290/148‑1 (MQ=255)                                      aCCAGATGGCTTTTGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑GCCGCCGCCGATGAc                                                                                                             <  3:1987/149‑1 (MQ=255)                                       ccAGATGGCTTTTGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑GCCGCCGCCGATGACg                                                                                                            <  8:7711/149‑1 (MQ=255)                                       ccAGATGGCTTTTGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGATATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑GCAGCCGCCGATGAc                                                                                                             >  6:208114/1‑148 (MQ=255)                                        cAGATGGCTTTTGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑GCCGCCGCCGATGACGa                                                                                                           >  2:103200/1‑149 (MQ=255)                                         aGATGGCTTTTGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑GCCGCCGCCGATGACGAt                                                                                                          <  5:72764/149‑1 (MQ=255)                                          gATGGCTTTTGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATc                                                                                                         <  4:114874/149‑1 (MQ=255)                                                 tttGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCa                                                                                                   >  1:321828/1‑148 (MQ=255)                                                  ttGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACggc                                                                                                    >  8:210137/1‑144 (MQ=255)                                                  ttGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTc                                                                                                    <  7:210137/146‑1 (MQ=255)                                                     ccAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑GCCGCCGCCGATGACGAt                                                                                                          <  6:99177/137‑1 (MQ=255)                                                     ccAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑GCCGCCGCCGATGACGAt                                                                                                          >  5:99177/1‑137 (MQ=255)                                                      cAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCC‑TCGGTACCGGCATg                                                                                                                              <  8:280851/118‑1 (MQ=255)                                                      cAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCC‑TCGGTACCGGCATg                                                                                                                              >  7:280851/1‑118 (MQ=255)                                                       aaTACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑GCCGCCGCCTATGACGATCACGTCAAAACggg                                                                                            <  5:190270/149‑1 (MQ=255)                                                          aCCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑gccg                                                                                                                        >  8:65216/1‑118 (MQ=255)                                                          aCCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑gccg                                                                                                                        <  7:65216/118‑1 (MQ=255)                                                                             cAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACgggaag                                                                                         <  8:199340/130‑1 (MQ=255)                                                                             cAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACgggaag                                                                                         >  7:199340/1‑130 (MQ=255)                                                                               gCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACgggaagg                                                                                        <  3:212386/129‑1 (MQ=255)                                                                               gCTCATGTGAACGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACgggaagg                                                                                        >  4:212386/1‑129 (MQ=255)                                                                                    tgtgACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACGGGAAGGGAAATCCACCACGCACCTCGTGCCt                                                               <  8:107064/149‑1 (MQ=255)                                                                                    tgtgACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACGGGAAGGGAAATCCACCACGCACCTCGTGCCt                                                               >  7:107064/1‑149 (MQ=255)                                                                                     gtgACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACGGGAAGGGAAATCCACCACGCACCTCGTGCCTg                                                              >  1:166761/1‑149 (MQ=255)                                                                                        aCCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACGGGAAGGGAAATCCACCACGCACCTCGTGCCTGttt                                                           >  5:35881/1‑149 (MQ=255)                                                                                          cGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACGGGAAGGGAAATCCACCACGCACCTCGTGCCTGttttt                                                         >  6:121705/1‑149 (MQ=255)                                                                                           gAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACGGGAAGGGAAATCCACCACGCACCTCGTGCCTGTTTTTg                                                        <  5:121705/149‑1 (MQ=255)                                                                                            aGGTTTTCCACGTTTTGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCC‑TCGGTACCGGCATGCTCCCGCCGCCGATGACGATCACGTCAAAACGGGAAGGGAAATCCACCACGCACCTCGTGCCTGttttt                                                         <  1:103200/149‑1 (MQ=255)                                                                                            aGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACGGGAAGGGAAATCCACCACGCACCTCGTGCCTGTTTTTGc                                                       <  7:60768/149‑1 (MQ=255)                                                                                                tttCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTc                                                                                                    <  4:172741/100‑1 (MQ=255)                                                                                                tttCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTc                                                                                                    >  3:172741/1‑100 (MQ=255)                                                                                                 ttCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACGGGAAGGGAAATCCACCACGCACCTCGTGCCTGTTTTTGAGAATa                                                  >  4:15510/1‑149 (MQ=255)                                                                                                    cACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACGGGAAGGGAAATCCACCACGCACCTCCTGCCTGTTTTTGCGAATa                                                  >  1:153113/1‑146 (MQ=255)                                                                                                     aCGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACGGGAAGGGAAATCCACCACGCACCTCGTGCCTGTTTTTGCGAATAgaga                                              <  6:35881/149‑1 (MQ=255)                                                                                                       gTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACGGGAAGGGAAATCCACCACGCACCTCGTGCCTGTTTTTGCGAATAGAGAAg                                            >  5:117444/1‑149 (MQ=255)                                                                                                         cttgcgtctgcacgcatgggtgtgaaaaccctgctgctgacGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACGGGAAGGGAAATCCACCACGCACCTCGTGCCTGttt                                                           >  3:40120‑M2/42‑132 (MQ=255)                                                                                                         cttgcgtctgcacgcatgggtgtgaaaaccctgctgctgacGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACGGGAAGGGAAATCCACCACGCACCTCGTGCCTGttt                                                           <  4:40120‑M2/91‑1 (MQ=255)                                                                                                           tGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACGGGAAGGGAAATCCACCACGCACCTCGTGCCTGTTTTTGCGAATAGAGAAGGt                                          >  8:218770/1‑147 (MQ=255)                                                                                                              gtctgcacgcatgggtgtgaaaaccctgctgctgacGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACGGGAAGGGAAATCCACCACGCACCTCGTGCCTGTTTTTGCGAATAGAGaa                                             >  6:89648‑M2/37‑141 (MQ=255)                                                                                                              gtctgcacgcatgggtgtgaaaaccctgctgctgacGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACGGGAAGGGAAATCCACCACGCACCTCGTGCCTGTTTTTGCGAATAGAGaa                                             <  5:89648‑M2/105‑1 (MQ=255)                                                                                                              GTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACGGGAAGGGAAATCCACCACGCACCTCGTGCCTGTTTTTGCGAATAGAGAAGGTAAGCg                                     <  5:17876‑M1/149‑1 (MQ=255)                                                                                                                  gcagcagGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACGGGAAGGGAAATCCACCACGCACCTCGTGCCTGTTTTTGCGAATAGAGaa                                             >  4:72542/1‑137 (MQ=255)                                                                                                                  gcagcagGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACGGGAAGGGAAATCCACCACGCACCTCGTGCCTGTTTTTGCGAATAGAGaa                                             <  3:72542/137‑1 (MQ=255)                                                                                                                   cagcagGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTc                                                                                                    <  6:10852/81‑1 (MQ=255)                                                                                                                    agcagGGTTTTCACACCCAAGCGTGCAGACGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACGGGAAGGGAAATCCACCACGCACCTCGTGCCTGTTTTTGCGAATAGAGaa                                             <  5:17691/135‑1 (MQ=255)                                                                                                                    agcagGGTTTTCACACCCAAGCGTGCAGACGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACGGGAAGGGAAATCCACCACGCACCTCGTGCCTGTTTTTGCGAATAGAGaa                                             >  6:17691/1‑135 (MQ=255)                                                                                                                     gcagGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACGGGAAGGGAAATCCACCACGCACCTCGTGCCTGTTTTTGCGAATAGAGAAGGTAAGCGGACAAGt                              <  6:17876/149‑1 (MQ=255)                                                                                                                        gggTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACGGGAAGGGAAATCCACCACGCACCTCGTGCCTGTTTTTGCGAATAGAGAAGGTAAGCGGACAAGtata                           <  4:184350/149‑1 (MQ=255)                                                                                                                         ggTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACGGGAAGGGAAATCCACCACGCACCTCGTGCCTGtttt                                                          >  5:98728/1‑117 (MQ=255)                                                                                                                         ggTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACGGGAAGGGAAATCCACCACGCACCTCGTGCCTGtttt                                                          <  6:98728/117‑1 (MQ=255)                                                                                                                           ttttCACACCCATGCGTGCAGACGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACGGGAAGGGAAATCCACCACGCACCTCGTGCCTGTTTTTGCGAATAGAGAAGGTAAGCGGACAAGTATAggg                        <  2:166761/149‑1 (MQ=255)                                                                                                                              tCACACCCATGCGTGCAGACGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACGGGAAGGGAAATCCACCACGCACCTCGTGCCTGTTTTTGCGAATAGAGAAGGTAAGCGGACAAGTATAGGGACt                     >  7:282297/1‑149 (MQ=255)                                                                                                                                ctacCCATGCGTGCAGACGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACGGGAAGGGAAATCCACCACGCACCTCGTGCCTGTTTTTGCGAATAGAGAAGGTAAGCGGACAAGTATAGGGACTTc                   <  7:208132/147‑1 (MQ=255)                                                                                                                                acacCCATGCGTGCAGACGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACTGGAAGGGAAATCCACCACGCACCTAGTGCCTGTTTTTGCGAATAGAGAAGGTAAGCTGACAAGTATAGGGAAtt                    >  8:317769/1‑148 (MQ=255)                                                                                                                                   cccATGCGTGCAGACGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACGGGAAGGGAAATCCACCACGCACCTCGTGCCTGTTTTTGCGAATAGAGAAGGTAAGCGGACAAGTATAGGGACTTc                   >  8:208132/1‑146 (MQ=255)                                                                                                                                    ccATGCGTGCAGACGCAAGCGCAGCCGTCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACGGGAAGGGAAATCCACCACGCACCTCGTGCCTGTTTTTGCGAATAGAGAAGGTAAGCGGACAAGTATAGGGACTTcccc                >  1:3628/1‑149 (MQ=255)                                                                                                                                       tGCGTGCAGACGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACGGGAAGGGAAATCCACCACGCACCTCGTGCCTGTTTTTGCGAATAGAGAAGGTAAGCTGACAAGTATAGGGACTTccccccc             >  4:233680/1‑148 (MQ=255)                                                                                                                                         cGTGCAGACGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACGTGAAGTGAAATCCACCACGCACCTCGTGCCTGTTTTTGCGAATAGAGAAGGTAAGCGGACAAGTATAGGGACTTCCCCCCCAGt          <  7:218770/149‑1 (MQ=255)                                                                                                                                         cGTGCAGACGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACGGGAAGGGAAATCCACCACGCACCTCGTGCCTGTTTTTGCGAATAGAGAAGGTAAGCGGACAAGTATAGGGACTTCCCCCCCAg           <  3:15510/148‑1 (MQ=255)                                                                                                                                                 cGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACGGGAAGGGAAATCCACCACGCACCTCGTGCCTGTTTTTGCGAATAGAGAAGGTAAGCGGACAAGTATAGGGACTTCCCCCCCAGTAAAGAAAc  <  5:134937‑M2/148‑1 (MQ=255)                                                                                                                                                  gCAAGCGCAGCC‑TCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACGGGAAGGGAAATCCACCACGCAc                                                                        >  7:103150/1‑78 (MQ=255)                                                                                                                                                  gCAAGCGCAGCC‑TCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACGGGAAGGGAAATCCACCACGCAc                                                                        <  8:103150/78‑1 (MQ=255)                                                                                                                                                  gCAAGCGCAGCC‑TCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACGGGAAGGGAAATCCACCACGCACCTCGTGCCTGTTTTTGCGAATAGAGAAGGTAAGCGGACAAGt                              <  3:90070/120‑1 (MQ=255)                                                                                                                                                  gCAAGCGCAGCC‑TCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACGGGAAGGGAAATCCACCACGCACCTCGTGCCTGTTTTTGCGAATAGAGAAGGTAAGCGGACAAGt                              >  4:90070/1‑120 (MQ=255)                                                                                                                                                  |                                                                                                                                                       CAGCGCCATGGCGCCGCCGAGCGCATCGATCTCTTTGACCAGATGGCTTTTGCCAATACCGCCGATGGCGGGGTTGCAGCTCATGTGACCGAGGGTTTCCACGTTATGGGTCAGCAGCAGGGTTTTCACACCCATGCGTGCAGACGCAAGCGCAGCC‑TCGGTACCGGCATG‑‑GCCGCCGCCGATGACGATCACGTCAAAACGGGAAGGGAAATCCACCACGCACCTCGTGCCTGTTTTTGCGAATAGAGAAGGTAAGCGGACAAGTATAGGGACTTCCCCCCCAGTAAAGAAAC  >  NC_002947/4163‑4455

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.