New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1880920 =	68 (1.260)	3 (0.060)	3/246	NT	5.1%	coding (594/930 nt)	PP_1688	LysR family transcriptional regulator
	?	NC_002947	1880970 =	47 (0.920)					coding (644/930 nt)	PP_1688	LysR family transcriptional regulator

GAAGACCAGCTGCTGGCCCGGCGCATCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTG‑GGGCTTCATGCGGGACGGCCTGCGCTTCGAAGCGGAATTCGGCACTGTATTGATCAGCGACGATATCGATGCCCTGACCCAGATGGCCTTGCACGATGGTGGCATCACCCGTCTGGCCGAGTTCATCGTGCGGC  >  NC_002947/1880774‑1881068                                                                                                                                                   |                                                                                                                                                      gAAGACCAGCTGCTGGCCCGGCGCATCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGcc                                                                                                                                                      <  2:246611/148‑1 (MQ=255) gAAGACCAGCTGCTGGCCCGGCGCATCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCg                                                                                                                                                     >  5:203843/1‑149 (MQ=255)  aaGACCAGCTGCTGGCCCGGCGCATCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGc                                                                                                                                                    >  4:200491/1‑149 (MQ=255)                gCCCGGCGCATCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCTTGCGTTGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTg‑g                                                                                                                                       <  1:89727/147‑1 (MQ=255)                 cccGGCGCATTGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTG‑GGGc                                                                                                                                    >  6:103098/1‑149 (MQ=255)                         aTCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTG‑GGGCTTCATGCg                                                                                                                            <  8:92972/149‑1 (MQ=255)                          tCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTG‑GGGCTTCATGCgg                                                                                                                           <  3:145013/149‑1 (MQ=255)                                  aTCCCGTTCATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTG‑GGGCTTCATGCGGGACGGCCt                                                                                                                   <  1:83929/149‑1 (MQ=255)                                  aTCCCGTTCATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTG‑GGGCTTCATGCGGGACGGCCt                                                                                                                   <  3:200491/149‑1 (MQ=255)                                      cGTTCATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTG‑GGGCTTCATGCGGGACGGCCTgcgc                                                                                                               >  8:44202/1‑149 (MQ=255)                                       gTTCATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTG‑GGGCTTCATGCGGGACGGCCTGCGCt                                                                                                              >  7:232743/1‑149 (MQ=255)                                        ttCATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTG‑GGGCTTCATGCGGGACGGCCTGCGCtt                                                                                                             <  5:103098/149‑1 (MQ=255)                                          cATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTG‑GGGCTTCATGCGGGACGGCCTGCGCTTc                                                                                                            <  8:96130/148‑1 (MQ=255)                                              tgttgtGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTg‑g                                                                                                                                       <  8:324423/117‑1 (MQ=255)                                              tgttgtGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTg‑g                                                                                                                                       >  7:324423/1‑117 (MQ=255)                                              cggccgcacgatgaactcggccagacgggtgatgccaccatcgtgcaaggccatctgggtcagggcatcgatatcgtcgctgatcaatacagtgccgaattCCGCTTCTTGCGCTG‑GGGCTTCATGCGGGACGGCCTGCGCTTCGAAGc                                                                                                       >  4:302772‑M1/102‑149 (MQ=255)                                                ttgtGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTG‑GGGCTTCATGCGGGACGGCCTGCGCTTCGAAGCgg                                                                                                     <  1:120156/149‑1 (MQ=255)                                                     ccTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTG‑GGGCTTCATGCGGGACGGCCTGCGCTTCGAAGCGGAATTc                                                                                                >  3:132007/1‑149 (MQ=255)                                                      cTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGcttct                                                                                                                                                >  5:239911/1‑101 (MQ=255)                                                      cTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGcttct                                                                                                                                                <  6:239911/101‑1 (MQ=255)                                                         tgaactcggccagacgggtgatgccaccatcgtgcaaggccatctgggtcagggcatcgatatcgtcgctgatcaatacagtgccgaattCCGCTTCTTGCGCTG‑GGGCTTCATGCGGGACGGCCTGCGCTTCGAAGCgg                                                                                                     >  3:216521‑M1/91‑140 (MQ=255)                                                         tgaactcggccagacgggtgatgccaccatcgtgcaaggccatctgggtcagggcatcgatatcgtcgctgatcaatacagtgccgaattCCGCTTCTTGCGCTG‑GGGCTTCATGCGGGACGGCCTGCGCTTCGAAGCgg                                                                                                     <  4:216521‑M1/50‑1 (MQ=255)                                                         aCCCGGTTACCTGCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTG‑GGGCTTCATGCGGGACGGCCTGCGCTTCGAAGCGGAATTCGGCa                                                                                            >  2:45291/1‑149 (MQ=255)                                                           ccGGTTACCTGCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATGCGGTGGATGGCCGCTTCTTGCGCTG‑GGGCTTCATGCGGGACGGCCTGCGCTTCGAAGCGGAATTCGGCACt                                                                                          >  1:109526/1‑149 (MQ=255)                                                                 aCCTGCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCATGGTGTTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTG‑GGGCTTCATGCGGGACGGCCTGCGCTTCGAAGCGGAATTCGGCACTGTAtt                                                                                     >  5:239335/1‑148 (MQ=255)                                                                  ccTGCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTG‑GGGCTTCATGCGGGACGGCCTGCGCTTCGAAGCg                                                                                                      <  3:139871/130‑1 (MQ=255)                                                                  ccTGCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTG‑GGGCTTCATGCGGGACGGCCTGCGCTTCGAAGCg                                                                                                      >  4:139871/1‑130 (MQ=255)                                                                     gCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTG‑GGGCTTCATGCGGGACGGCCTGCGCTTCGAAGCGGAATTCgg                                                                                              >  4:173505/1‑135 (MQ=255)                                                                     gCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTG‑GGGCTTCATGCGGGACGGCCTGCGCTTCGAAGCGGAATTCgg                                                                                              <  3:173505/135‑1 (MQ=255)                                                                     gCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTG‑GGGCTTCATGCGGGACGGCCTGCGCTTCGAAGCGGAATTCGGCACTGTATTGAt                                                                                  >  3:283773/1‑147 (MQ=255)                                                                     gCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTG‑GGGCTTCATGCGGGACGGCCTGCGCTTCGAAGCGGAATTCGGCACTGTATTGAt                                                                                  >  5:25954/1‑147 (MQ=255)                                                                        gagCGCTGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTG‑GGGCTTCATGCGGGACGGCCTGCGCTTCGAAGCGGAATTCGGCACTGTATTGATCAGc                                                                              >  1:338506/1‑148 (MQ=255)                                                                             cTGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTG‑GGGCTTCATGCGGGACGGCCTGCGCTTCGAAGCGGAATTCGGCACTGTATTGATCAGCGACGat                                                                        <  6:25954/149‑1 (MQ=255)                                                                              tGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTG‑GGGCTTCATGCGGGACGGCCTGCGCTTCGAAGCGGAATTCGGCACTGTAt                                                                                      >  7:52856/1‑134 (MQ=255)                                                                              tGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGGGTTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTG‑GGGCTTCATGCGGGACGGCCTGCGCTTCGAAGCGGAATTCGGCACTGTAt                                                                                      <  8:52856/134‑1 (MQ=255)                                                                                  gTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTG‑GGGCTTCATGCGGGACGGCCTGCGCTTCGAAGCGGAATTCGGCACTGTATTGATCAGCGACGATATCGa                                                                   >  6:204899/1‑149 (MQ=255)                                                                                    aCCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTG‑GGGCTTCATGCGGGACGGCCTGCGCTTCGAAGCGGAATTCGGCACTGTATTGATCAGCGACGATATCGATg                                                                 >  3:59772/1‑149 (MQ=255)                                                                                     ccTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTG‑GGGCTTCATGCGGGACGGCCTGCGCTTCGAAGCGGAATTCGGCACTGTATTGATCAGCGACGATATCGATGc                                                                >  4:68774/1‑149 (MQ=255)                                                                                      cTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGcttctt                                                                                                                                               >  7:207637/1‑70 (MQ=255)                                                                                      cTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGcttctt                                                                                                                                               <  8:207637/70‑1 (MQ=255)                                                                                          cACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTG‑GGGCTTCATGCGGGACGGCCTGCGCTTCGAAGCGGAATTCGGCACTGTATTGATCAGCGACGATATCGATGCCCTGa                                                           <  6:203843/149‑1 (MQ=255)                                                                                           aCGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGGCGCTTCTTGCGCTGAGGGCTTCATGCGGGACGGCCTGCGCTTCGaa                                                                                                         <  1:36487/103‑1 (MQ=255)                                                                                           aCGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTG‑GGGCTTCATGCGGGACGGCCTGCGCTTCGAAGCGGAATTCGGCACTGTATTGATCAGCGACGATATCGATGc                                                                <  6:119918/143‑1 (MQ=255)                                                                                           aCGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTG‑GGGCTTCATGCGGGACGGCCTGCGCTTCGAAGCGGAATTCGGCACTGTATTGATCAGCGACGATATCGATGc                                                                >  5:119918/1‑143 (MQ=255)                                                                                           aCGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTG‑GGGCTTCATGCGGGACGGCCTGCGCTTCGAAGCGGAATTCGGCACTGTATTGATCAGCGACGATATCGATGCCCTGAc                                                          >  4:287050/1‑149 (MQ=255)                                                                                           aCGCCCGAGGCCTTGCCCCGGCACCGTTGCCTGGTGTTTCGCTATCCGCAGGATGCCCCCTACTTGCGCTC‑GGGCTTCATGCGGGACCGCCTGCGCTTCGaa                                                                                                         >  2:36487/1‑102 (MQ=255)                                                                                             gCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTG‑GGGCTTCATg                                                                                                                              <  3:190842/79‑1 (MQ=255)                                                                                             gCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTG‑GGGCTTCATg                                                                                                                              >  4:190842/1‑79 (MQ=255)                                                                                             gCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTG‑GGGCTTCATGCGGGACGGCCTGCGCTTCGAAGCGGAATTCGGCACTGTATTGATCAGCGACGATATCGATGCCCTGAccc                                                        <  5:219592/149‑1 (MQ=255)                                                                                               ccGAGGCCTTGCGCGGGCACCGTTGCCTGGGGTTTCGCTATCCGGTGGATGGCCACTTCTTGCGCTG‑GGGCTTCATGCGGGACGGCCTGCGCTTCGAAGCGGAATTCGGCACTCTATTGATCAGCGACGATATCGATGCCCTGAcc                                                         >  3:34524/1‑146 (MQ=255)                                                                                                cGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGTCCGCTTCTTGCGCTG‑GGGCTTCATGCGGGACGGCCTGCGCTTCGAAGCGGAATTCGGCACTGTATTGATCAGCGACGATATCg                                                                    <  3:290073/134‑1 (MQ=255)                                                                                                cGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGTCCGCTTCTTGCGCTG‑GGGCTTCATGCGGGACGGCCTGCGCTTCGAAGCGGAATTCGGCACTGTATTGATCAGCGACGATATCg                                                                    >  4:290073/1‑134 (MQ=255)                                                                                                  aGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTG‑GGGCTTCATGCGGGACGGCCTGCGCTTCGAAGCGGAATTCGGCACTGTATTGATCAGCGACGATATCGATGCCCTGACCCAGATg                                                   <  8:232743/149‑1 (MQ=255)                                                                                                   ggCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTG‑GGGCTTCATGCGGGACGGCCTGCGCTTCGAAGCGGAATTCGGCACTGTATTGATCAGCGACGATATCGATGCCCt                                                             >  6:18321/1‑138 (MQ=255)                                                                                                   ggCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTG‑GGGCTTCATGCGGGACGGCCTGCGCTTCGAAGCGGAATTCGGCACTGTATTGATCAGCGACGATATCGATGCCCt                                                             <  5:18321/138‑1 (MQ=255)                                                                                                          cgcgGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTG‑GGGCTTCATGCGGGACGGCCTGCGCTTCGAAGCGGAATTCGGCACTGTATTGATCAGCGACGATATCGATGCCCTGACCCAGATGGCCTTGCa                                           <  3:68774/149‑1 (MQ=255)                                                                                                           gcgGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTG‑GGGCTTCATGCGGGACGGCCTGCGCTTCGAAGCGGAATTCGGCACTGTATTGATCAGCGACGATATCGATGCCCTGACCCAGATGGCCTTGCAc                                          <  3:287050/149‑1 (MQ=255)                                                                                                               gCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTG‑GGGCTTCATGCGGGACGGCCTGCGCTTCGAAGCGGAATTCGGCACTGTATTg                                                                                    <  3:65430/103‑1 (MQ=255)                                                                                                               gCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTG‑GGGCTTCATGCGGGACGGCCTGCGCTTCGAAGCGGAATTCGGCACTGTATTg                                                                                    >  4:65430/1‑103 (MQ=255)                                                                                                               gCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTG‑GGGCTTCATGCGGGACGGCCTGCGCTTCGAAGCGGAATTCGGCACTGTATTGATCAGCGACGATATCGATGCCCTGACCCAGATGGCCTTGCACGAtg                                      >  1:204573/1‑149 (MQ=255)                                                                                                               gCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTG‑GGGCTTCATGCGGGACGGCCTGCGCTTCGAAGCGGAATTCGGCACTGTATTGATCAGCGACGATATCGATGCCCTGACCCAGATGGCCTTGCACGAtg                                      <  2:109526/149‑1 (MQ=255)                                                                                                                 aCCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTG‑GGGCTTCATGCGGGACGGCCTGCGCTTCGAAGCGGAATTCGGCACTGTATTGATCAGCGACGATATCGATGCCCTGACCCAGATGGCCTTGCACGAtggt                                    <  4:283773/149‑1 (MQ=255)                                                                                                                 aCCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTG‑GGGCTTCATGCGGGACGGCCTGCGCTTCGAAGCGGAATTCGGCACTGTATTGATCAGCGACGATATCGATGCCCTGACCCAGATGGCCTTGCACGAtggt                                    <  4:132007/149‑1 (MQ=255)                                                                                                                          tGGTGTTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTG‑GGGCTTCATGCGGGACGGCCTGCGCTTCGAAGCGGAATTCGGCACTGTATTGATCAGCGACGATATCGATGCCCTGACCCAGATGGCCTTGCACGATGGTGGCATCAcc                           >  6:177320/1‑149 (MQ=255)                                                                                                                            gtgtTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTG‑GGGCTTCATGCGGGACGGCCTGCGCTTCGAAGCGGAATTCGGCACTGTATTGATCAGCGACGATATCGATGCCCTGa                                                           <  4:82028/115‑1 (MQ=255)                                                                                                                            gtgtTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTG‑GGGCTTCATGCGGGACGGCCTGCGCTTCGAAGCGGAATTCGGCACTGTATTGATCAGCGACGATATCGATGCCCTGa                                                           >  3:82028/1‑115 (MQ=255)                                                                                                                                   gCTATCCGGTGGATGGCCGCTTCTTGCGCTG‑GGGCTTCATGCGGGACGGCCTGCGCTTCGAAGCGGAATTCGGCACTGTATTGATCAGCGACGATATCGATGCCCTGACCCAGATGGCCTTGCACGATGGTGGCATCACCCGTCTGGcc                  >  7:166849/1‑149 (MQ=255)                                                                                                                                    cTATCCGGTGGATGGCCGCTTCTTGCGCTG‑GGGCTTCATGCGGGACGGCCTGCGCTTCGAAGCTGAATTCGGCACTGTATTGATCAGCGACGATCTCGATGCCCTGACCCAGAt                                                    <  6:233570/114‑1 (MQ=255)                                                                                                                                    cTATCCGGTGGATGGCCGCTTCTTGCGCTG‑GGGCTTCATGCGGGACGGCCTGCGCTTCGAAGCTGAATTCGGCACTGTATTGATCAGCGACGATATCGATGCCCTGACCCAGAt                                                    >  5:233570/1‑114 (MQ=255)                                                                                                                                       tCCGGTGGATGGCCGCTTCTTGCGCTG‑GGGCTTCATGCGGGACGGCCTGCGCTTCGAAGCGGAATTCGGCACTGTATTGATCAGCGACGATATCGATGCCCTGACCCAGATGGCCTTGCACGATGGTGGCATCACCCGTCTGGCCGa                <  4:59772/147‑1 (MQ=255)                                                                                                                                       tCCGGTGGATGGCCGCTTCTTGCGCTG‑GGGCTTCATGCGGGACGGCCTGCGCTTCGAAGCGGAATTCGGCACTGTATTGATCAGCGACGATATCGATGCCCTGACCCAGATGGCCTTGCACGATGGTGGCATCACCCGTCTGGCCGAg               <  4:8529/148‑1 (MQ=255)                                                                                                                                         cGGTGGATGGCCGCTTCTTGCGCTG‑GGGCTTCATGCGGGACGGCCTGCGCTTCGAAGCGGAATTCGGCACTGTATTGATCAGCGACGATATCGATGCCCTGACCCAGATGGCCTTGCACGATGGTGGCATCACCCGTCTGGCCGAGTTc            <  5:204899/149‑1 (MQ=255)                                                                                                                                           gTGGATGGCCGCTTCTTGCGCTG‑GGGCTTCATGCGGGACGGCCTGCGCTTCGAAGCGGAATTCGGCACTGTATTGATCAGCGACGATATCGATGCCCTGACCCAGATGGCCTTGCACGATGGTGGCATCACCCGTCTGGCCGAGTTCAt          >  3:158847/1‑149 (MQ=255)                                                                                                                                            tGGATGGCCGCTTCTTGCGCTG‑GGGCTTCATGCGGGACGGCCTGCGCTTCGAAGCGGAATTCGGCACTGTATTGATCAGCGACGATATCGATGCCCTGACCCAGATGGCCTTGCACGATGGTGGCATCACCCGTCTGGCCGAGTTCATc         <  8:166849/149‑1 (MQ=255)                                                                                                                                                tGGCCGCTTCTTGCGCTG‑GGGCTTCATGCGGGACGGCCTGCGCTTCGAAGCGGAATTCGGCACTGTATTGATCAGCGACGATATCGATGCCCTGACCCAGATGGCCTTGCACGATGGTGGCATCACCCGTCTGGCCGAGTTCATCGTGc     <  2:338506/149‑1 (MQ=255)                                                                                                                                                   CCGCTTCTTGCGCTG‑GGGCTTCATGCGGGACGGCCTGCGCTTCGAAGCGGAATTCGGCACTGTATTGATCAGCGACGATATCGATGCCCTGACCCAGATGGCCTTGCACGATGGTGGCATCACCCGTCTGGCCGAGTTCATCGTGCGGc  <  4:153269‑M1/149‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                      GAAGACCAGCTGCTGGCCCGGCGCATCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTG‑GGGCTTCATGCGGGACGGCCTGCGCTTCGAAGCGGAATTCGGCACTGTATTGATCAGCGACGATATCGATGCCCTGACCCAGATGGCCTTGCACGATGGTGGCATCACCCGTCTGGCCGAGTTCATCGTGCGGC  >  NC_002947/1880774‑1881068

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.