New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1977647 =	69 (1.280)	3 (0.060)	3/244	NT	5.5%	coding (1311/2241 nt)	PP_1770	3‑phosphoshikimate 1‑carboxyvinyltransferase
	?	NC_002947	1977733 =	39 (0.770)					coding (1397/2241 nt)	PP_1770	3‑phosphoshikimate 1‑carboxyvinyltransferase

GCCTGCATGGCCTCAAGCCGCCACCTGGGCCGCTGTACGTAGGTAACTCCGGTACTTCGATGCGCCTACTGTCGGGCCTGTTGGCCGGTCAGCCGTTCGATGTCACCATGACCGGCGACGCCTCGCTGTCCAAGCGCCCGATGAACCGTGTGGCCAACCCGCTGCGCGAAATGGGTGCTGTGGTCGAGACCGGCCC‑GGA‑CGGCCGTCCGCCGCTGACCATCCGCGGTGGCCACAAGCTCAAAGGGCTGACCTACACGCTGCCGATGGCTAGCGCCCAGGTCAAATCCTGCCT  >  NC_002947/1977499‑1977790                                                                                                                                                     |                                                                                                                                                  gCCTGCATGGCCTCAAGCCGCCACCTGGGCCGCTGTACGTAGGTAACTCCGGTACTTCGATGCGCCTACTGTCGGGCCTGTTGGCCGGTCAGCCGTTCGATGTCACCATGACCGGCGACGCCTCGCTGTCCAAGCGCCCGATGAACCgt                                                                                                                                                   >  1:78051/1‑149 (MQ=255)  ccTGCATGGCCTCAAGCCGCCACCTGGGCCGCTGTACGTAGGTAACTCCGGTACTTCGATGCGCCTACTGTCGGGCCTGTTGGCCGGTCAGCCGTTCGATGTCACCATGACCGGCGACGCCTCGCTGTCCAAGCGCCCGATGAACCgtg                                                                                                                                                  >  5:182222/1‑149 (MQ=255)    ccgcgcagcatgcgctcggtgtggtcacgggtaggcgcaggctcagtgacagtggtcttgccttcggcgtacaggccggccagcagcaggcaggatttgacctgggcgctagccatcggcagcgtgtaggtcagccctttgagcttgtg                                                                                                                                                >  4:201720‑M1/146‑149 (MQ=255)    ccgcgcagcatgcgctcggtgtggtcacgggtaggcgcaggcgcagtgacagtggtcttgccttcggcgtacaggccggccagcagcaggcaggatttgacctgggcgctagccatcggcagcgtgtaggtcagccctttgagcttgtg                                                                                                                                                >  8:230271‑M1/146‑149 (MQ=255)      cATGGCCTCAAGCCGCCACCTGGGCCGCTGTACGTAGGTAACTCCGGTACTTCGATGCGCCTACTGTCGGGCCTGTTGGCCGGTCAGCCGTTCGATGTCACCATGACCGGCGACGCCTCGCTGTCCAAGCGCCCGATGAACCGtgtg                                                                                                                                                <  1:194516/147‑1 (MQ=255)      cATGGCCTCAAGCCGCCACCTGGGCCGCTGTACGTAGGTAACTCCGGTACTTCGATGCGCCTACTGTCGGGCCTGTTGGCCGGTCAGCCGTTCGATGTCACCATGACCGGCGACGCCTCGCTGTCCAAGCGCCCGATGAACCGtgtg                                                                                                                                                <  6:182222/147‑1 (MQ=255)          gCCTCAAGCCGCCACCTGGGCCGCTGTACGTAGGTAACTCCGGTACTTCGATGCGCCTACTGTCGGGCCTGTTGGCCGGTCAGCCGTTCGATGTCACCATGACCGGCGACGCCTCGCTGTCCAAGCGCCCGATGAACCGTGTGGCCAAc                                                                                                                                          >  7:190736/1‑149 (MQ=255)           ccTCAAGCCGCCACCTGGGCCGCTGTACGTAGGTAACTCCGGTACTTCGATGCGCCTACTGTCGGGCCTGTTGGCCGGTCAGCCGTTCGATGTCACCATGACCGGCGACGCCTCGCTGTCCAAGCGCCCGATGAACCGTGTGGCCAAcc                                                                                                                                         >  2:94115/1‑149 (MQ=255)            cTCAAGCCGCCACCTGGGCCGCTGTACGTAGGTAACTCCGGTACTTCGATGCGCCTACTGTCGGGCCTGTTGGCCGGTCAGCCGTTCGATGTCACCATGACCGGCGACGCCTCGCTGTCCAAGCGCCCGATGAACCGTGTGGCCAAccc                                                                                                                                        >  7:33604/1‑149 (MQ=255)             tCAAGCCGCCACCTGGGCCGCTGTACGTAGGTAACTCCGGTACTTCGATGCGCCTACTGTCGGGCCTGTTGGCCGGTCAGCCGTTCGATGTCACCATGACCGGCGACGCCTCGCTGTCCAAGCGCCCGATGAACCGTGTGGCCAACCCg                                                                                                                                       >  3:284616/1‑149 (MQ=255)                 gccgccACCTGGGCCGCTGTACGTAGGTAACTCCGGTACTTCGATGCGCCTACTGTCGGGCCTGTTGGCCGGTCAGCCGTTCGATGTCACCATGACCGGCGACGCCTCGCTGTCCAAGCGCCCGATGAACCGTGTGGCCAACCCGCTgc                                                                                                                                   <  1:94115/149‑1 (MQ=255)                   cgccACCTGGGCCGCTGTACGTAGGTAACTCCGGTACTTCGATGCGCCTACTGTCGGGCCTGTTGGCCGGTCAGCCGTTCGATGTCACCATGACCGGCGACGCCTCGCTGTCCAAGCGCCCGATGAACCGTGTGGCCAACCCGCTgcgc                                                                                                                                 <  8:218680/149‑1 (MQ=255)                    gccACCTGGGCCGCTGTACGTAGGTAACTCCGGTACTTCGATGCGCCTACTGTCGGGCCTGTTGGCCGGTCAGCCGTTCGATGTCACCATGACCGGCGACGCCTCGCTGTCCAAGCGCCCGATGAACCGTGTGGCCAACCCGCTgcgc                                                                                                                                 >  1:323763/1‑148 (MQ=255)                     ccACCTGGGCCGCTGTACGTAGGTAACTCCCGTACTTCGAAGCGCCTACTGTCGCGCCTGTTCGCCGGTCAGCCCTTCGATGTCACCATGACCGGCGACGCCTCGCAGTCCAAGCGCCCTATGAACCGAGTGGCCAACCCGCAGcgcg                                                                                                                                >  2:246991/1‑148 (MQ=255)                        ccTGGGCCGCTGTACGTAGGTAACTCCGGTACTTCTAAGCGCCTACTGTCGCGCCTGTAGGCCGGTCAGCCGATCCATGTCACCATGACCGGCGACGCCTCGCTGTCCAAGCGCCCGATGAACCCTGACGCCAACCCGc                                                                                                                                      >  5:198217/1‑139 (MQ=255)                        ccTGGGCCGCTGTACGTAGGTAACTCCGGTACTTCGATGAGCATACTGTCGGGCCTGTTGGCCGGTCAGCCGTTCGATGTCACCATGACCGGCGACGCCTCGCTGTCCAAGCGCCCGATGAACCGTGTGGCCAACCCGc                                                                                                                                      <  6:198217/139‑1 (MQ=255)                            ggCCGCTGTACGTAGGTAACTCCGGTACTTCGATGCGCCTACTGTCGGGCCTGTTGGCCGGTCAGCCGTTCGATGTCACCATGACCGGCGACGCCTCGCTGTCCAAGCGCCCGATGAACCGTGTGGCCAACCCGCTGCGCGAAATGGGt                                                                                                                        >  2:22518/1‑149 (MQ=255)                               cGCTGTACGTAGGTAACTCCGGTACTTCGATGCGCCTACTGTCGGGCCTGTTGGCCGGTCAGCCGTTCGATGTCACCATGACCGGCGACGCCTCGCTGTCCAAGCGCCCGATGAACCGTGTGGCCAACCCGCTGCGCGAAATGGGTGCt                                                                                                                     <  4:284616/149‑1 (MQ=255)                                      cGTAGGTAACTCCGGTACTTCGATGCGCCTACTGTCGGGCCTGTTGGCCGGTCAGCCGTTCGATGTCACCATGACCGGCGACGCCTCGCTGTCCAAGCGCCCGATGAACCGTGTGGCCAACCCGCTGCGCGAAATGGGTGCTGTGGTc                                                                                                               >  6:67358/1‑148 (MQ=255)                                       gTAGGTAACTCCGGTACTTCGATGCGCCTACTGTCGGGCCTGTTGGCCGGTCAGCCGTTCGATGTCACCATGACCGGCGACGCCTCGCTGTCCAAGCGCCCGATGAACCGTGTGGCCAACCCGCTGCGCGAAATGGGTGCTGTGGTc                                                                                                               >  1:288930/1‑147 (MQ=255)                                       gTAGGTAACTCCGGTACTTCGATGCGCCTACTGTCGGGCCTGTTGGCCGGTCAGCCGTTCGATGTCACCATGACCGGCGACGCCTCGCTGTCCAAGCGCCCGATGAACCGTGTGGCCAACCCGCTGCGCGAAATGGGTGCTGTGGTCga                                                                                                             <  8:175071/149‑1 (MQ=255)                                           gTAACTCCGGTACTTCGATGCGCCTACTGTCGGGCCTGTTGGCCGGTCAGCCGTTCGATGTCACCATGACCGGCGACGCCTCGCTGTCCAAGCGCCCGATGAACCGTGTGGCCAACCCGCTGCGCGAAATGGGTGCTGTGGTCGAGAcc                                                                                                         >  4:246520/1‑149 (MQ=255)                                                tCCGGTACTTCGATGCGCCTACTGTCGGGCCTGTTGGCCGGTCAGCCGTTCGATGTCACCATGACCGGCGACGCCTCGCTGTCCAAGCGCCCGATGAACCGTGTGGCCAACCCGCTGCGCGAAATGGGTGCTGTGGTCGAGACCGGccc                                                                                                    >  5:221039/1‑149 (MQ=255)                                                  cGGTACTTCGATGCGCCTACTGTCGGGCCTGTTGGCCGGTCAGCCGTTCGATGTCACCATGACCGGCGACGCCTCGCTGTCCAAGCGCCCGATGAACCGTGTGGCCAACCCGCTGCGCGAAATGGGTGCTGTGGTCGAGACCGGCCC‑gg                                                                                                 <  2:323763/149‑1 (MQ=255)                                                        ttCGATGCGCCTACTGTCGGGCCTGTTGGCTGGTCAGCCGTTCGATGTCACCATGACCGGCGACGCCTCGCTGTCCAAGCGCCCGATGAACCGTGTGGCCAACCCGCTGCGCGAAATgg                                                                                                                          >  6:276050/1‑119 (MQ=255)                                                        ttCGATGCGCCTACTGTCGGGCCTGTTGGCTGGTCAGCCGTTCGATGTCACCATGACCGGCGACGCCTCGCTGTCCAAGCGCCCGATGAACCGTGTGGCCAACCCGCTGCGCGAAATgg                                                                                                                          <  5:276050/119‑1 (MQ=255)                                                           gATGCGCCTACTGTCGGGCCTGTTGGCCGGTCAGCCGTTCGATGTCACCATGACCGGCGACGCCTCGCTGTCCAAGCGCCCGATGAACCGTGTGGCCAACCCGCTGCGCGAAATGGGTGCTGTGGTCGAGACCGGCCC‑GGA‑CGGCCGt                                                                                        <  5:340954/148‑1 (MQ=255)                                                           gATGCGCCTACTGTCGGGCCTGTTGGCCGGTCAGCCGTTCGATGTCACCATGACCGGCGACGCCTCGCTGTCCAAGCGCCCGATGAACCGTGTGGCCAACCCGCTGCGCGAAATGGGTGCTGTGGTCGAGACCGGCCC‑GGA‑CGGCCGTc                                                                                       >  3:325809/1‑149 (MQ=255)                                                             tGCGCCTACTGTCGGGCCTGTTGGCCGGTCTGCCGTTCGATGTCACCATGACCGGCGACGCCTCGCTGTCCAAGCGCCCGATGAACCGTGTGGCCAACCCGCTGCGCGAAATGGGTGCTGTGGTCGAGACCGGCCC‑GGA‑CGGCCGTccg                                                                                     <  2:78051/149‑1 (MQ=255)                                                                gcCTACTGTCGGGCCTGTTGGCCGGTCAGCCGTTCGATGTCACCATGACCGGCGACGCCTCGCTGTCCAAGCGCCCGATGAACCGTGTgg                                                                                                                                               >  4:252930/1‑90 (MQ=255)                                                                gcCTACTGTCGGGCCTGTTGGCCGGTCAGCCGTTCGATGTCACCATGACCGGCGACGCCTCGCTGTCCAAGCGCCCGATGAACCGTGTgg                                                                                                                                               <  3:252930/90‑1 (MQ=255)                                                                  cgaCTGTCGGGCCTGGTGGCCGGTCAGCCGTTCGATGGCACCATGACCGGCGACGCCTCGCGGTCCAAGCGCCCGTTGAACCGTGTGGCCAACCCGCTGCGCGAAATGGGTGCTGTGGTCGAGACCGGCCC‑GGA‑CGGCCGTCCGCCGCt                                                                                <  6:129218/147‑1 (MQ=255)                                                                  cTACTGTCGGGCCTGTTGGCCGGTCAGCCGTTCGATGTCACCATGACCGGCGACGCCTCGCTGTCCAAGCGCCCGATGAACCGTGTGGCCAACCCGCTGCGCGAAATGGGTGCTGTGGTCGAGACCGGCCC‑GGA‑CGGCCGTCCGCCGCt                                                                                <  8:33604/149‑1 (MQ=255)                                                                  cTACTGTCGGGCCTGTTGGCCGGTCAGCCGTTCGATGTCACCATGACCGGCGACGCCTCGCTGTCCAAGCGCCCGATGAACCGTGTGGCCAACCCGCTGCGCGAAATGGGTGCTGTGGTCGAGACCGGCCC‑GGA‑CGGCCGTCCGCCGCt                                                                                <  4:325809/149‑1 (MQ=255)                                                                     cTGTCGGGCCTGTTGGCCGGTCAGCCGTTCGATGTCACCATGACCGGCGACGCCTCGCTGTCCAAGCGCCCGATGAACCGTGTGGCCAACCCGCTGCGCGAAATGGGTGCTGTGGTCGAGACCGGCCC‑GGA‑CGGCCGTCCGCCGCTGa                                                                              <  4:47718/148‑1 (MQ=255)                                                                        tCGGGCCTGTTGGCCGGTCAGCCGTTCGATGTCACCATGACCGGCGACGCCTCGCTGTCCAAGCGCCCGATGAACCGTGTGGCCAACCCGCTGCGCGAAATGGGTGCTGTGGTCGAGACCGGCCC‑GGA‑CGGCCGTCCGCCGCTGCCCAt                                                                          >  2:322356/1‑149 (MQ=255)                                                                        tCGGGCCTGTTGGCCGGTCAGCCGTTCGATGTCACCATGACCGGCGACGCCTCGCTGTCCAAGCGCCCGATGAACCGTGTGGCCAACCCGCTGCGCGAAATGGGTGCTGTGGTCGAGACCGGCCC‑GGA‑CGGCCGTCCGCCGCTGACCAt                                                                          >  4:252203/1‑149 (MQ=255)                                                                        gcGGGCCTGTTGGCCGGGCAGCCGTTCGATGTCACCATGACCGGCGACGCCTCGCTGTCCAAGCGCCCGATGAACGGTGTGGCCAACCCGCTGCGCGATTTGGGTGCTGTGGTGGAGACCGGCCC‑GGA‑CGGCCGTCCGCCGCTGag                                                                             <  1:246991/145‑2 (MQ=255)                                                                          gggCCTGTTGGCCCGTCAGCCGTACGATGTCACCATGACCGGCGACGCCTCGCTGTCCAAGCGCCCGAAGAACCGTGTGGCCAACCCGCTGCGCGAAATGGGTGCAGAGGTCGAGACCGGCCC‑CGA‑CCGCCGTCCGCGGCTGACCATcc                                                                        >  8:164154/1‑149 (MQ=255)                                                                           ggCCTGTTGGCCGGTCAGCCGTTCGATGTCACCATGACCGGCGACGCCTCGCTGTCCAAGCGCCCGATGAACCGTGTGGCCAACCCGCTGCGCGAAATGGGTGCTGTGGTCGAGACCGGCCC‑GGA‑CGGCCGTCCGCCGCTGACCATCcg                                                                       >  8:21802/1‑149 (MQ=255)                                                                            gCCTGTTGGCCGGTCAGCCGTTCGATGTCACCATGACCGGCGACGCCTCGCTGTCCAAGCGCCCGATGAACCGTGTGGCCAACCCGCTGCGCGAAATGGGTGCTGTGGTCGAGACCGGCCC‑GGA‑CGGCCGTCCGCCGCTGACCATCcgc                                                                      <  3:246520/149‑1 (MQ=255)                                                                              cTGTTGGCCGGTCAGCCGTTCGATGTCACCATGACCGGCGACGCCTCGCTGTCCAAGCGCCCGATGAACCGTGTGGCCAACCCGCTGCGCGAAATGGGTGCTGTGGTCGAGACCGGCCC‑GGA‑CGGCCGTCCGCCGCTGACCATCCGCgg                                                                    >  4:322852/1‑149 (MQ=255)                                                                              cTGTTGGCCGGTCAGCCGTTCGATGTCACCATGACCGGCGACGCCTCGCTGTCCAAGCGCCCGATGAACCGTGTGGCCAACCCGCTGCGCGAAATGGGTGCTGTGGTCGAGACCGGCCC‑GGA‑CGGCCGTCCGCCGCTGACCATCCGCgg                                                                    >  7:288346/1‑149 (MQ=255)                                                                                 ttGGCCGGTCAGCCGTTCGATGTCACCATGACCGGCGACGCCTCGCTGTCCAAGCGCCCGATGAACCGTGTGGCCAACCCGCTGCGCGAAATGGGTGCTGTGGTCGAGACCGGCCC‑GGA‑CGGCCGTCCGCCGCTGACCATCCGCGGTgg                                                                 <  2:288930/149‑1 (MQ=255)                                                                                 ttGGCCGGTCAGCCGTTCGATGTCACCATGACCGGCGACGCCTCGCTGTCCAAGCGCCCGATGAACCGTGTGGCCAACCCGCTGCGCGAAATGGGTGCTGTGGTCGAGACCGGCCC‑GGA‑CGGCCGTCCGCCGCTGACCATCCGCGGTgg                                                                 <  7:21802/149‑1 (MQ=255)                                                                                   ggCCTGTCAGCCGTTCTATGTCACCATGACCGGCGACGCCTCGCTGTCCAAGCGCCCGATGAACCGTGTGGCCAACCCGCTGCGCGAAATGGGTGCTGTGGTCGAGACCGGCCC‑GGA‑CGGCCGTCCGCCGCTGACCATCCGCGGTGGc                                                                <  6:242071/148‑1 (MQ=255)                                                                                    gCCGGTCAGCCGTTCGATGTCACCATGACCGGCGACGCCTCGCTGTCCAAGCGCCCGATGAACCGTGTGGCCAACCCGCTGCGCGAAATGGGTGCTGTGGTCGAGACCGGCCC‑GGA‑CGGCCGTCCGCCGCTGACCATCCGCGGTGGCca                                                              >  7:61398/1‑149 (MQ=255)                                                                                     ccGGTCAGCCGTTCGATGTCACCATGACCGGCGACGCCTCGCTGTCCAAGCGCCCGATGAACCGTGTGGCCAACCCGCTGCGCGAAATGGGTGCTGTGGTCGAGACCGGCCC‑GGA‑CGGCCGTCCGCCGCTGACCATCCGCGGTGGCcac                                                             <  1:22518/149‑1 (MQ=255)                                                                                     ccGGTCAGCCGTTCGATGTCACCATGACCGGCGACGCCTCGCTGTCCAAGCGCCCGATGAACCGTGTGGCCAACCCGCTGCGCGAAATGGGTGCTGTGGTCGAGACCGGCCC‑GGA‑CGGCCGTCCGCCGCTGACCATCCGCGGTGGCcac                                                             <  3:252203/149‑1 (MQ=255)                                                                                      cGGTCAGCCGTTCGATGTCACCATGACCGGCGACGCCTCGCTGTCCAAGCGCCCGATGAACCGTGTGGCCAACCCGCTGCGCGAAATGGGTGCTGTGGt                                                                                                                <  3:274392/99‑1 (MQ=255)                                                                                      cGGTCAGCCGTTCGATGTCACCATGACCGGCGACGCCTCGCTGTCCAAGCGCCCGATGAACCGTGTGGCCAACCCGCTGCGCGAAATGGGTGCTGTGGt                                                                                                                >  4:274392/1‑99 (MQ=255)                                                                                        gTCAGCCGTTCGATGTCACCATGACCGGCGACGCCTCGCTGTCCAAGCGCCCGATGAACCGTGTGGCCAACCCGCTGCGCGAAATGGGTGCTGTGGTCGAGACCGGCCC‑GGA‑CGGCCGTCCGCCGCTGACCATCCGCGGTGGCCACAAg                                                          >  3:122680/1‑149 (MQ=255)                                                                                        agcaggcaggatttgacctgggcgctagccatcggcagcgtgtaggtcagccctttgagctTGTGGCCAACCCGCTGCGCGAAATGGGTGCTGTGGTCGAGACCGGCCC‑GGA‑CGGCCGTCCGCCGCTGACCATCCGCGGTGGCCACAAg                                                          >  4:100828‑M1/62‑149 (MQ=255)                                                                                         gcaggcaggatttgacctgggcgctagccatcggcagcgtgtaggtcagccctttgagctTGTGGCCAACCCGCTGCGCGAAATGGGTGCTGTGGTCGAGACCGGCCC‑GGA‑CGGCCGTCCGCCGCTGACCATCCGCGGTGGCcac                                                             <  7:304018‑M1/85‑1 (MQ=255)                                                                                         gcaggcaggatttgacctgggcgctagccatcggcagcgtgtaggtcagccctttgagctTGTGGCCAACCCGCTGCGCGAAATGGGTGCTGTGGTCGAGACCGGCCC‑GGA‑CGGCCGTCCGCCGCTGACCATCCGCGGTGGCcac                                                             >  8:304018‑M1/61‑145 (MQ=255)                                                                                           aGCCGTTCGATGTCACCATGACCGGCGACGCCTCGCTGTCCAAGCGCCCGATGAACCGTGTGGCCAACCCGCTGCGCGAAATGGGTGCTGTGGTCGAGACCGGCCC‑GGA‑CGGCCGTCCGCCGCTGACCATCCGCGGTGGCCACAAGCTc                                                       <  6:221039/149‑1 (MQ=255)                                                                                            gCCGTTCGATGTCACCATGACCGGCGACGCCTCGCTGTCCAAGCGCCCGATGAACCGTGTGGCCAACCCGCTGCGCGAAATGGGTGCTGTGGTCGAGACCGGCCC‑GGA‑CGGCCGTCCGCCGCTGACCATCCGCGGTGGCCACAAGCTc                                                       >  2:316480/1‑148 (MQ=255)                                                                                            gCCGTTCGATGTCACCATGACCGGCGACGCCTCGCTGTCCAAGCGCCCGATGAACCGTGTGGCCAACCCGCTGCGCGAAATGGGTGCTGTGGTCGAGACCGGCCC‑GGA‑CGGCCGTCCGCCGCTGACCATCCGCGGTGGCCACAAGCTc                                                       <  1:316480/148‑1 (MQ=255)                                                                                                   gATGTCACCATGACCGGCGACGCCTCGCTGTCCAAGCGCCCGATGAACCGTGTGGCCAACCCGCTGCGCGAAATGGGTGCTGTGGTCGAGACCGGCCCAAAA‑CGCCCTGCCCCCGAGGACCAACCGCGGTGGCCACAACCTAAAAgg                                                  >  1:283342/1‑147 (MQ=255)                                                                                                   gATGTCACCATGACCGGCGACGCCTCGCTGTCCAAGCGCCCGATGAACCGTGTGGCCAACCCGCTGCGCGAAATGGGTGCTGTGGTCGAGACCGGCCC‑CGAGCGCCCGACGGCCGCGGCCCAGCCGCGGGGGGCCCACCCGCAAAGGGc                                                >  1:287269/1‑149 (MQ=255)                                                                                                    aTGTCACCATGACCGGCGACGCCTCGCTGTCCAAGCGCCCGATGAACCGTGTGGCCAACCCGCTGCGCGAAATGGGTGCTGTGGTCGAGACCGGCCC‑GGA‑CGGCCGTCCGCCGCTGACCATCCGCGGTGGCCACAAGCTCAAAGGGCTg                                              <  8:190736/149‑1 (MQ=255)                                                                                                    aTGTCACCATGACCGGCGACGCCTCGCTGTCCAAGCGCCCGATGAACCGTGTGGCCAACCCGCTGCGCGAAATGGGTGCTGTGGTCGAGACCGGCCC‑GGA‑CGGCCGTCCGCCGCTGACCATCCGCGGTGGCCACAAGCTCAAAGGGCTg                                              <  3:322852/149‑1 (MQ=255)                                                                                                       tCACCATGACCGGCGACGCCTCGCTGTCCAAGCGCCCGATGAACCGTGTGGCCAACCCGCTGCGCGAAATGGGTGCTGTGGTCGAGACCGGCCC‑GGA‑CGGCCGTCCGCCGCTGa                                                                              >  7:14758/1‑114 (MQ=255)                                                                                                       tCACCATGACCGGCGACGCCTCGCTGTCCAAGCGCCCGATGAACCGTGTGGCCAACCCGCTGCGCGAAATGGGTGCTGTGGTCGAGACCGGCCC‑GGA‑CGGCCGTCCGCCGCTGa                                                                              <  8:14758/114‑1 (MQ=255)                                                                                                       tCACCATGACCGGCGACGCCTCGCTGTCCAAGCGCCCGATGAACCGTGTGGCCAACCCGCTGCGCGAAATGGGTGCTGTGGTCGAGACCGGCCC‑GGA‑CGGCCGTCCGCCGCTGACCATCCGTGGTGGCCACAAGCTCAAAGGGCTGAc                                            <  5:67358/148‑1 (MQ=255)                                                                                                           cATGACCGGCGACGCCTCGCTGTCCAAGCGCCCGATGAACCGTGTGGCCAACCCGCTGCGCGAAAt                                                                                                                            <  6:325923/66‑1 (MQ=255)                                                                                                           cATGACCGGCGACGCCTCGCTGTCCAAGCGCCCGATGAACCGTGTGGCCAACCCGCTGCGCGAAAt                                                                                                                            >  5:325923/1‑66 (MQ=255)                                                                                                                     gACGCCTCGCTGTCCAAGCGCCCGATGAACCGTGTGGCCAACCCGCTGCGCGAAATGGGTGCTGTGGTCGAGACCGGc                                                                                                      >  4:201723/1‑78 (MQ=255)                                                                                                                     gACGCCTCGCTGTCCAAGCGCCCGATGAACCGTGTGGCCAACCCGCTGCGCGAAATGGGTGCTGTGGTCGAGACCGGc                                                                                                      <  3:201723/78‑1 (MQ=255)                                                                                                                        gCCTCGCTGTCCAAGCGCCCGATGAACCGTGTGGCCAACCCGCTGCGCGAAATGGGTGCTGTGGTCGAGACCGGCCC‑GGA‑CGGCCGTCCGCCGCTGACCATCCGCGGTGGCCACAAGCTCAAAGGGCTGACCTACACGCTGCCGATGGc                          >  7:156326/1‑149 (MQ=255)                                                                                                                          cTCGCTGTCCAAGCGCCCGATGAACCGTGTGGCCAACCCGCTGTGCGAAATGGGTGCTGTGGTCGAGACCGGCCC‑GGA‑CGGCCCTCCGCCGCGGCCCCTCCGCGGTGGCCACAAGCTGAAAGGGCTGACCTACCCGCTGCCGATGGc                          >  1:239937/1‑147 (MQ=255)                                                                                                                           tCGCTGTCCAAGCGCCCGATGAACCGTGTGGCCAACCCGCTGCGCGAAATGGGTGCTGTGGTCGAGACCGGCCC‑GGA‑CGGCCGTCCGCCGCTGACCATCCGCGGTGGCCACAAGCTCAAAGGGCTGACCTACACGCTGCCGATGGCTAg                       >  2:61591/1‑149 (MQ=255)                                                                                                                           tCGCTGTCCAAGCGCCCGATGAACCGTGTGGCCAACCCGCTGCGCGAAATGGGTGCTGTGGTCGAGACCGGCCC‑GGA‑CGGCCGTCCGCCGCTGACCATCCGCGGTGGCCACAAGCTCAAAGGGCTGACCTACACGCTGCCGATGGCTAg                       >  1:213419/1‑149 (MQ=255)                                                                                                                                     aGCGCCCGATGAACCGTGTGGCCAACCCGCTGCGCGAAATGGGTGCTGTGGTCGAGACCGGCCC‑GGA‑CGGCCGTCCGCCGCTGACCATCCGCGGTGGCCACAAGCTCAAAGGGCTGACCTACACGCTGCCGATGGCTAGCGCCCAGGTc             <  2:213419/149‑1 (MQ=255)                                                                                                                                        gcCCGATGAAGCTTGTGGCCAACCCGCTGCGCGATATGGGTTCTGTTGTCGAGACCGGCCC‑GGA‑CGGCCGTCCGCCGCTGACCATCCGCTGTgg                                                                 <  7:170276/94‑1 (MQ=255)                                                                                                                                         cccGATGAACCGTGTGGCCAACCCGCTGCGCGAAATGGGTGCTGTGGTCGAGACCGGCCC‑GGA‑CGGCCGTCCGCCGCTGACCATCCGCGGTGGCCACAACCTCAAAGGGCTGACCTACACGCTGCCGATGGCTAGCGCCCAGGTCaaa          >  6:34999/1‑148 (MQ=255)                                                                                                                                          ccGATGAACCGTGTGGCCAACCCGCTGCGCGAAATGGGTGCTGTGGTCGAGACCGGCCC‑GGA‑CGGCCGTCCGCCGCTGACCATCCGCGGTGGCCACAAGCTCAAAGGGCTGACCTACACGCTGCCGATGGCTAGCGCCCAGGTCAAATc        <  1:150081/149‑1 (MQ=255)                                                                                                                                            gATGAACCGTGTGGCCAACCCGCTGCGCGAAATGGGTg                                                                                                                       >  4:200332/1‑38 (MQ=255)                                                                                                                                            gATGAACCGTGTGGCCAACCCGCTGCGCGAAATGGGTGCTGTGGTCGAGACCGGCCC‑GGA‑CGGCCGTCCGCCGCTGACCATCCGCGGTGGCCACAAGCTCAAAGGGCTGACCTACACGCTGCCGATGGCTAGCGCCCAGGTCAAATcct      <  4:122680/149‑1 (MQ=255)                                                                                                                                            gATGAACCGTGTGGCCAACCCGCTGCGCGAAATGCGTg                                                                                                                       <  3:200332/38‑1 (MQ=255)                                                                                                                                                 aCCGTGTGGCCAACCCGCTGCGCGAAATGGGTGCTGTGGCCGAGACCGGCCC‑GGA‑CGGCCGTCCGCCGCTGACCATCCGCGGTGGCCACAAGCTCAAAGGGCTGACCTACACGCTGCCGATGGCTAGCGCCCAGGTCAAATcctgcct  >  6:192494/1‑148 (MQ=255)                                                                                                                                                     |                                                                                                                                                  GCCTGCATGGCCTCAAGCCGCCACCTGGGCCGCTGTACGTAGGTAACTCCGGTACTTCGATGCGCCTACTGTCGGGCCTGTTGGCCGGTCAGCCGTTCGATGTCACCATGACCGGCGACGCCTCGCTGTCCAAGCGCCCGATGAACCGTGTGGCCAACCCGCTGCGCGAAATGGGTGCTGTGGTCGAGACCGGCCC‑GGA‑CGGCCGTCCGCCGCTGACCATCCGCGGTGGCCACAAGCTCAAAGGGCTGACCTACACGCTGCCGATGGCTAGCGCCCAGGTCAAATCCTGCCT  >  NC_002947/1977499‑1977790

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.