New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2773525	44 (0.810)	3 (0.060)	3/238	NT	6.9%	coding (529/1053 nt)	calA	coniferyl alcohol dehydrogenase
	?	NC_002947	= 2773551	41 (0.830)					coding (555/1053 nt)	calA	coniferyl alcohol dehydrogenase

GGGCGGGTACTCCAGCAGCATCGTGGTCAGCGAGCACTTCGTGGTGCGCATACCGGCCGGCATGGACCTGCCCAGCGCTGCACCTATTCTGTGTGCCGGCATCACCACCTATTCGCCGCTCAAGCACCAC‑GGCGTTGGCCCAGGCCACAAGATCGGCATCCTCGGCATGGG‑CGGCCTGGGCCACATGGGCATCAAACTGGCCAAGGCCCTGGGTGCGGAAGTGACCCTGTTTACGCGCTCCC‑AAGCCAAGGCCGAGGAAGCTCGCCGCCAGGGGGCCGACCATGTGATCGT  >  NC_002947/2773380‑2773670                                                                                                                                                   |                                                                                                                                                    gggCGGGTACTCCAGCAGCATCGTGGTCAGCGAGCACTTCGTGGTGCGCATACCGGCCGGCATGGACCTGCCCAGCGCTGCACCTATTCTGTGTGCCGGCATCACCAGCTATTCGCCGCTCAAGCACCAC‑GGCGTTGGCCCAGGCcac                                                                                                                                                   >  5:294513/1‑148 (MQ=255)      tgTACTCCAGAATCATCGTGTTCAGAGAGAACTTCGTTGTTCGCATACCGGCCGGCATGGCCATGCCCAGCGCTGCACCTATTCTGTGTGCCGGCATCACCACCTATTCGCCGCTCAAGCACCAC‑GGCGTTTGCCCAGGCCACAAGATc                                                                                                                                             <  6:175443/148‑1 (MQ=255)           tCCAGCAGCATCGTGGTCAGCGAGCACTTCGTGGTGCGCATACCGGCCGGCATGGACCTGCCCAGCGCTGCACCTATTCTGTGTGCCGGCATCACCACCTATTCGCCGCTCAAGCACCAC‑GGCGTTGGCCCAGGCCACAAGATCGGCAt                                                                                                                                        >  2:20838/1‑149 (MQ=255)                    aTCGTGGTCAGCGAGCACTTCGTGGTGCGCATACCGGCCGGCATGGACCTGCCCAGCGCTGCACCTATTCTGTGTGCCGGCATCACCACCTATTCGCCGCTCAAGCACCAC‑GGCGTTGGCCCAGGCCACAAGATCGGCATCCTCGGCAt                                                                                                                               >  7:160609/1‑149 (MQ=255)                         ggTCAGCGAGCACTTCGTGGTGCGCATACCGGCCGGCATGGACCTGCCCAGCGCAGCACCTATTCTGTGTGCCGGCATCACCACCTATTCGCCGCTCAAGCACCAC‑GGCGTTGGCCCACGCCCCAAGATCCGCCTACTCCGCATGgg‑cc                                                                                                                         >  6:190321/1‑148 (MQ=255)                          gTCAGCGAGCACTTCGTGGTGCGCATACCGGCCGGCATGGACCTGCCCAGCGCTGCACCTATTCTGTGTGCCGGCATCACCACCTATTCGCCGCTCAAGCACCAC‑GGCGTTGGCCCAGGCCACAAGATCGGCATCCTCGGCATGGG‑Cgg                                                                                                                        <  6:196041‑M2/149‑3 (MQ=255)                          gTCAGCGAGCACTTCGTGGTGCGCATACCGGCCGGCATGGACCTGCCCAGCGCTGCACCTATTCTGTGTGCCGGCATCACCACCTATTCGCCGCTCAAGCACCAC‑GGCGTTGGCCCAGGCCACAAGATCGGCATCCTCGGCATGGG‑Cg                                                                                                                         >  2:4336‑M2/1‑147 (MQ=255)                             aGCGAGCACTTCGTGGTGCGCATACCGGCCGGCATGGACCTGCCCAGCGCTGCACCTATTCTGTGTGCCGGCATCACCACCTATTCGCCGCTCAAGCACCAC‑GGCGTTGGCCCAGGCCACAAGATCGGCATCCTCGGCATGGG‑Cggcct                                                                                                                     <  2:91587‑M2/149‑6 (MQ=255)                              gCGAGCACTTCGTGGTGCGCATACCGGCCGGCATGGACCTGCCCAGCGCTGCACCTATTCTGTGTGCCGGCATCACCACCTATTCGCCGCTCAAGCACCAC‑GGCGTTGGCCCAGGCCACAAGATCGGCATCCTCg                                                                                                                                   >  8:192778/1‑135 (MQ=255)                              gCGAGCACTTCGTGGTGCGCATACCGGCCGGCATGGACCTGCCCAGCGCTGCACCTATTCTGTGTGCCGGCATCACCACCTATTCGCCGCTCAAGCACCAC‑GGCGTTGGCCCAGGCCACAAGATCGGCATCCTCg                                                                                                                                   <  7:192778/135‑1 (MQ=255)                                 aGCACTTCGTGGTGCGCATACCGGCCGGCATGGACCTGCCCAGCGCTGCACCTATTCTGTGTGCCGGCATCACCACCTATTCGCCGCTCAAGCACCAC‑GGCGTTGGCCCAGGCCACAAGATCGGCATCCTCGGCATGGG‑Cggcctgggc                                                                                                                 >  1:178582‑M2/1‑140 (MQ=255)                                 aGCACTTCGTGGTGCGCATACCGGCCGGCATGGACCTGCCCAGCGCTGCACCTATTCTGTGTGCCGGCATCACCACCTATTCGCCGCTCAAGCACCAC‑GGCGTTGGCCCAGGCCACAAGATCGGCATCCTCGGCATGGG‑Cggcctgggc                                                                                                                 >  2:53488‑M2/1‑140 (MQ=255)                                    aCTTCGTGGTGCGCATACCGGCCGGCATGGACCTGCCCAGCGCTGCACCTATTCTGTGTGCCGGCATCACCACCTATTCGCCGCTCAAGCACCAC‑GGCGTTGGCCCAGGCCgcccatgccgaggatgccgatcttgtggcctggg                                                                                                                   <  5:156312‑M1/145‑35 (MQ=255)                                    aCTTCGTGGTGCGCATACCGGCCGGCATGGACCTGCCCAGCGCTGCACCTATTCTGTGTGCCGGCATCACCACCTATTCGCCGCTCAAGCACCAC‑GGCGTTGGCCCAGGCCgcccatgccgaggatgccgatcttgtggcctggg                                                                                                                   >  6:156312‑M1/1‑111 (MQ=255)                                    aCTTCGTGGTGCGCATACCGGCCGGCATGGACCTGCCCAGCGCTGCACCTATTCTGTGTGCCGGCATCACCACCTATTCGCCGCTCAAGCACCAC‑GGCGTTGGCCCAGGCCACAAGATCGGCATCCTCGGCATGGG‑Cggcctgggcca                                                                                                               <  6:35207‑M2/148‑12 (MQ=255)                                     cTTCGTGGTGCGCATACCGGCCGGCATGGACCTGCCCAGCGCTGCACCTATTCTGTGTGCCGGCATCACCACCTATTCGCCGCTCAAGCACCAC‑GGCGTTGGCCCAGGCCgccccatgccgaggatgccgatcttgtggcctgggccaa                                                                                                              <  1:225674‑M1/149‑40 (MQ=255)                                         gtggggCGCATACCGGCCGGCATGGACCTGCCCAGCGCTGCACCTATGCTGTGGGCCGGCATCACCACCTATTCGCCGCTCAAGCACCAC‑GGCGTTGGCCCAGGCCACAAGATCGGCATCCTCGGCATGGG‑CGGCCTGGGCCACATggg                                                                                                         <  5:190321/149‑1 (MQ=255)                                                 cATACCGGCCGGCATGGACCTGCCCAGCGCTGCACCTATTCTGTGTGCCGGCATCACCACCTATTCGCCGCTCAAGCACCAC‑GGCGTTGGCCCAGGCCACAAGATCGGCATCCTCGGCATGGG‑CGGCCTGGGCCACATGGGCATCAAAc                                                                                                 >  6:128734/1‑149 (MQ=255)                                                 cATACCGGCCGGCATGGACCTGCCCAGCGCTGCACCTATTCTGTGTGCCGGCATCACCACCTATTCGCCGCTCAAGCACCAC‑GGCGTTGGCCCAGGCCACAAGATCGGCATCCTCGGCATGGG‑CGGCCTGGGCCACATGGGCATCAAAc                                                                                                 <  5:128734/149‑1 (MQ=255)                                                  aTACCGGCCGGCATGGACCTGCCCAGCGCTGCACCTATTCTGTGTGCCGGCATCACCACCTATTCGCCGCTCAAGCACCAC‑GGCGTTGGCCCAGGCCACAAGATCGGCATCCTCGGCATGGG‑CGGCCTGGGCCACATGGGCATCAAACt                                                                                                >  2:264989/1‑149 (MQ=255)                                                        gccggcATGGACCTGCCCAGCGCTGCACCTATTCTGTGTGCCGGCATCACCACCTATTCGCCGCTCAAGCACCAC‑GGCGTTGGCCCAGGCCACAAGATCGGCATCCTCGGCATGGG‑Cggcctgg                                                                                                                   <  4:5529‑M2/124‑8 (MQ=255)                                                        gccggcATGGACCTGCCCAGCGCTGCACCTATTCTGTGTGCCGGCATCACCACCTATTCGCCGCTCAAGCACCAC‑GGCGTTGGCCCAGGCCACAAGATCGGCATCCTCGGCATGGG‑Cggcctgg                                                                                                                   >  3:5529‑M2/1‑117 (MQ=255)                                                              aTGGACCTGCCCAGCGCTGCACCTATTCTGTGTGCCGGCATCACCACCTATTCGCCGCTCAAGCACCAC‑GGCGTTGGCCCAGGCCACAAGATCGGCATCCTCGGCATGGG‑CGGCCTGGGCCACATGGGCATCAAACTGGCCAAGGCCCt                                                                                    <  7:34522/149‑1 (MQ=255)                                                                  aCCTGCCCAGCGCTGCACCTATTCTGTGTGCCGGCATCACCACCTATTCGCCGCTCAAGCACCAC‑GGCGTTGGCCCAGGCCACAAGATCGGCATCCTCGGCATGGG‑CGGCCTGGGCCACATGGGCATCAAACTGGCCAAGGCCCTGGGt                                                                                <  3:178148/149‑1 (MQ=255)                                                                            cgcTGCACCTATTCTGTGTGCCGGCATCACCACCTATTCGCCGCTCAAGCACCAC‑GGCGTTGGCCCAGGCCACAAGATCGGCATCCTCGGGATTGG‑CGGCCTGGGCCACATGGGCATCAAACTGGCCAAGGCCCTGGGTGCGGAAGTGa                                                                      <  5:196041/149‑1 (MQ=255)                                                                            cgcTGCACCTATTCTGTGTGCCGGAATCACCACCTATTCGCCGCTCAAGCACCAC‑GGCGTTGGCCCAGGCCACAAGATCGGCATCCTCGGCATGGG‑CGGCCTGGGTCACATGGGCATCAAACCGGCCAAGGCCCTGGGTGCGGAAGTGa                                                                      <  1:184375/149‑1 (MQ=255)                                                                            cgcTGCACCTATTCTGTGTGCCGGAATCACCACCTATTCGCCGCTCAAGCACCAC‑GGCGTTGGCCCAGGCCACAAGATCGGCATCCTCGGCATGGG‑CGGCCTGGGTCACATGGGCATCAAACCGGCCAAGGCCCTGGGTGCGGAAGTGa                                                                      <  1:178815/149‑1 (MQ=255)                                                                                    cTATTCTGTGTGCCGGCATCACCACCTATTCGCCGCTCAAGCACCAC‑GGCGTTGGCCCAGGCCACAAGATCGGCATCCTCGGCATGGG‑CGGCCTGGGCCACATGGGCATCAAACTGGCCAAGGCCCTGGGTGCGGAAGTGACCCTGtt                                                               >  4:281648/1‑148 (MQ=255)                                                                                         cTGTGTGCCGGCATCACCACCTATTCGCCGCTCAAGCACCAC‑GGCGTTGGCCCAGGCCACAAGATCGGCATCCTCGGCATGGG‑CGGCCTGGGCCACATGGGCATCAAACTGGCCAAGGCCCTGGGTGCGGAAGTGACCCTGTTTAcgcg                                                         >  2:295298/1‑149 (MQ=255)                                                                                          tgtgtgCCGGCATCACCACCTATTCGCCGCTCAAGCACCAC‑GGCGTTGGCCCAGGGCACAAGATAGGCATACTCGGCATGGG‑CGGCCTGGGCCACATGGGCCTCAAACATGCCAATGCCCAGGGTGCGGAAGTGACCCTGTTTACgcgc                                                        >  2:298688/1‑149 (MQ=255)                                                                                          tgtgtgCCGGCATCACCACCTATTCGCCGCTCAAGCACCAC‑GGCGTTGGCCCAGGCCACAAGATCGGCATCCTCGGCATGGG‑CGGCCTGGGCCACATGGGCATCAAACTGGCCAAGGCCCTGGGTGCGGAAGTGACCCTGTTTCCgcgc                                                        >  8:297646/1‑149 (MQ=255)                                                                                            tgtgCCGGCATCACCACCTATTCGCCGCTCAAGCACCAC‑GGCGTTGGCCCAGGCCACAAGATCGGCATCCTCGGCATGGG‑CGGCCTGGGCCACATGGGCATCAAACTGGCCAAGGCCCTGGGTGCGGAAGTGACCCTGTTTACgcgc                                                        <  8:160609/147‑1 (MQ=255)                                                                                            tgtgCCGGCATCACCACCTATTCGCCGCTCAAGCACCAC‑GGCGTTGGCCCAGGCCACAAGATCGGCATCCTCGGCATGGG‑CGGCCTGGGCCACATGGGCATCAAACTGGCCAAGGCCCTGGGTGCGGAAGTGACCCTGTTTACGCGCTc                                                      >  2:41623/1‑149 (MQ=255)                                                                                             gtgCCGGCATCACCACCTATTCGCCGCTCAAGCACCAC‑GGCGTTGGCCCAGGCCACAAGATCGGCATCCTCGGCATGGG‑CGGCCTGGGCCACATGGGCATCAAACTGGCCAAGGCCCTGGGTGCGGAAGTGACCCTGTTTACGCGCTcc                                                     >  4:56099/1‑149 (MQ=255)                                                                                                   gCATCACCACCTATTCGCCGCTCAAGCACCACGGGCGTTGGCCCAGGCCACAAGATCGGCATCCTCGGCATGGG‑CGGCCTGGGCCACATGGGCATCAAACTGGCCAAGGCCCTGGGTGCGGAAGTGACCCTGTTTACGCGCTCcc‑aagc                                               >  1:41619/1‑149 (MQ=255)                                                                                                   gCATCACCACCTATTCGCCGCTCAAGCACCAC‑GGCGTTGGCCCAGGCCACAAGATCGGCATCCTCGGCATGGG‑CGGCCTGGGCCACATGGGCATCAAACTGGCCaa                                                                                          >  6:203700/1‑106 (MQ=255)                                                                                                   gCATCACCACCTATTCGCCGCTCAAGCACCAC‑GGCGTTGGCCCAGGCCACAAGATCGGCATCCTCGGCATGGG‑CGGCCTGGGCCACATGGGCATCAAACTGGCCaa                                                                                          <  5:203700/106‑1 (MQ=255)                                                                                                     aTCACCACCTATTCGCCGCTCAAGCACCAC‑GGCGTTGGCCCAGGCCACAAGATCGGCATCCTCGGCATGGG‑CGGCCTGGGCCACATGGGCATCAAACTGGCCAAGGCCCTGGGTGCGGAAGTGACCCTGTTTACGCGCTCcc‑aagccaa                                            <  5:35207/149‑1 (MQ=255)                                                                                                      tCACCACCTATTCGCCGCTCAAGCACCAC‑GGCGTTGGCCCAGGCCACAAGATCGGCATCCTCGGCATGGG‑CGGCCTGGGCCACATGGGCATCAAACTGGCCAAGGCCCTGGGTGCGGAAGTGACCCTGTTTACGCGCTCcc‑aagccaag                                           <  1:20838/149‑1 (MQ=255)                                                                                                        accaccTATTCGCCGCTCAAGCACCAC‑GGCGTTGGCCCAGGCCACAAGATCGGCATCCTCGGCATGGG‑CGGCCTGGGCCACATGGGCATCAAACTGGCCAAGGCCCTGGGTGCGGAAGTGACCCTGTTTACGCGCTCCC‑AAGCCAAGGc                                         >  5:246869/1‑149 (MQ=255)                                                                                                         ccaccTATTCGCCGCTCAAGCACCAC‑GGCGTTGGCCCAGGCCACAAGATCGGCATCCTCGGCATGGG‑CGGCCTGGGCCACATGGGCATCAAACTGGCCAAGGCCCTGGGTGCGGCAGTGACCCTGTTTACGCGCTCCC‑AAGCCAAGGcc                                        >  3:291010/1‑149 (MQ=255)                                                                                                          caccTATTCGCCGCTCAAGCACCAC‑GGCGTTGGCCCAGGCCACAAGATCGGCATCCTCGGCATGGG‑CGGCCTGGGCCACATGGGCATCAAACTGGCCAAGGCCCTGGGTGCGGAAGTGACCCTGTTTACGCGCTCCC‑AAGCCAAGGCCg                                       <  2:41619/149‑1 (MQ=255)                                                                                                            ccTATTCGCCGCTCAAGCACCAC‑GGCGTTGGCCCAGGCCACAAGATCGGCAGCCTCGGCATGGG‑CGGCCTGGGCCACATGGGCATCAAACTGGCCAAGGCCCTGGGTGCGGAAGTGACCCTGTTTACGCGCTCCC‑AAGCCAAGGCCGAg                                     <  3:50619/149‑1 (MQ=255)                                                                                                             cTATTCGCCGCTCAAGCACCAC‑GGCGTTGGCCCAGGCCACAAGATCGGCATCCTCGGCATGGG‑CGGCCTGGGCCACATGGGCATCAAACTGGCCAAGGCCCTGGGTGCGGAAGTGACCCTGTTTACGCGCTCCC‑AAGCCAAGGCCGAgg                                    <  7:139274/149‑1 (MQ=255)                                                                                                             cTATTCGCCGCTCAAGCACCAC‑GGCGTTGGCCCAGGCCACAAGATCGGCATCCTCGGCATGGG‑CGGCCTGGGCCACATGGGCATCAAACTGGCCAAGGCCCTGGGTGCGGAAGTGACCCTGTTTACGCGCTCCC‑AAGCCAAGGCCGAg                                     >  7:310823/1‑148 (MQ=255)                                                                                                                   gccgcTCAAGCACCAC‑GGCGTTGGCCCAGGCCACAAGATCGGCATCCTCGGCATGGG‑CGGCCTGGGCCACATGGGCATCAAACTGGCCAAGGCCCTGGGTGCGGAAGTGACCCTGTTTACGCGCTCCC‑AAGCCAAGGCCGAGGAAGCTc                              <  1:264989/149‑1 (MQ=255)                                                                                                                     cgcTCAAGCACCAC‑GGCGTTGGCCCAGGCCACAAGATCGGCATCCTCGGCATGGG‑CGGCCTGGGCCACATGGGCATCAAACTGGCCAAGGCCCTGGGTGCGGAAGTGACCCTGTTTACGCGCTCCC‑AAGCCAAGGCCGAGGAAGCTcgc                            <  6:246869/149‑1 (MQ=255)                                                                                                                          aaGCACCAC‑GGCGTTGGCCCAGGCCACAAGATCGGCATCCTCGGCATGGG‑CGGCCTGGGCCACATGGGCATCAAACTGGCCAAGGCCCTGGGTGCGGAAGTGACCCTGTTTACGCGCTCCC‑AAGCCAAGGCCGAGGAAGCTCGCCGCCa                       <  3:281648/149‑1 (MQ=255)                                                                                                                          aaGCACCAC‑GGCGTTGGCCCAGGCCACAAGATCGGCATCCTCGGCATGGG‑CGGCCTGGGCCACATGGGCATCAAACTGGCCAAGGCCCTGGGTGCGGAAGTGACCCTGTTTACGCGCTCCC‑AAGCCAAGGCCGAGGAAGCTCGCCGCCa                       <  3:56099/149‑1 (MQ=255)                                                                                                                             caccac‑GGCGTTGGCCCAGGCCACAAGATCGGCATCCTCGGCATGGG‑CGGCCTGGGCCACATGGGCATCAAACTGGCCAAGGCCCTGGGTGCGGAAGTGACCCTGTTTACGCGCTCCC‑AAGCCAAGGCCGAGGAAGCTCGCCGCCAggg                    >  4:303710/1‑149 (MQ=255)                                                                                                                              accac‑GGCGTTGGCCCAGGCCACAAGATCGGCATCCTCGGCATGGG‑CGGCCTGGGCCACATGGGCATCAAACTGGCCAAGGCCCTGGGTGCGGAAGTGACCCTGTTTACGCGCTCCC‑AAGCCAAGGCCGAGGAAGCTCGCCGCCAgggg                   <  8:310823/149‑1 (MQ=255)                                                                                                                              accac‑GGCGTTGGCCCAGGCCACAAGATCGGCATCCTCGGCATGGG‑CGGCCTGGGCCACATGGGCATCAAACTGGCCAAGGCCCTGGGTGCGGAAGTGACCCTGTTTACGCGCTCCC‑AAGCCAAGGCCGAGGAAGCTCGCCGCCAgggg                   >  1:100698/1‑149 (MQ=255)                                                                                                                                cac‑GGCGTTGGCCCAGGCCACAAGATCGGCATCCTCGGCATGGG‑CGGCCTGGGCCACATGGGCATCAAACTGGCCAAGGCCCTGGGTGCGGAAGTGACCCTGTTTACGCGCTCCC‑AAGCCAAGGCCGAGGAAGCTCGCCGCCa                       <  2:316205/143‑1 (MQ=255)                                                                                                                                cac‑GGCGTTGGCCCAGGCCACAAGATCGGCATCCTCGGCATGGG‑CGGCCTGGGCCACATGGGCATCAAACTGGCCAAGGCCCTGGGTGCGGAAGTGACCCTGTTTACGCGCTCCC‑AAGCCAAGGCCGAGGAAGCTCGCCGCCa                       >  1:316205/1‑143 (MQ=255)                                                                                                                                  c‑GGCGTTGGCCCAGGCCACAAGATCGGCATCCTCGGCATGGG‑CGGCCTGGGCCACATGGGCATCAAACTGGCCAAGGCCCTGGGTGCGGAAGTGACCCTGTTTACGCGCTCCCAAAGCCAAGGCCGAGGAAGCTCGCCGCCAGGGGGcc                <  1:41623/149‑1 (MQ=255)                                                                                                                                    ggCGTTGGCCCAGGCCACAAGATCGGCATCCTCGGCATGGG‑CGGCCTGGGCCACATGGGCATCAAACTGGCCAAGGCCCTGGGTGCGGAAGTGACCCTGTTTACGCGCTCCC‑AAGCCAAGGCCGAGGAAGCTCGCCGCCAGGGGGCCGa              >  8:172793/1‑149 (MQ=255)                                                                                                                                        ttGGCCCAGGCCACAAGATCGGCATCCTCGGCATGGGGCggcctgggccaacgccgtggtgcttgagcggcgaataggtggtgatgccggcacacagaataggtgcagcgctgggcaggtccatgccggccggtatgcgcaccacgaag            <  1:225674‑M2/149‑111 (MQ=255)                                                                                                                                         tGGCCCAGGCCgcccatgccgaggatgccgatcttgtggcctgggccaacgccgtggtgcttgagcggcgaataggtggtgatgccggcacacagaataggtgcagcgctgggcaggtccatgccggccggtatgcgcaccacgaagt            <  6:35207‑M1/148‑138 (MQ=255)                                                                                                                                           gCCCAGGCCgcccatgccgaggatgccgatcttgtggcctgggccaacgccgtggtgcttgagcggcgaataggtggtgatgccggcacacagaataggtgcagcgctgggcaggtccatgccggccggtatgcgcaccacgaagtgct         >  2:53488‑M1/1‑9 (MQ=255)                                                                                                                                           gCCCAGGCCgcccatgccgaggatgccgatcttgtggcctgggccaacgccgtggtgcttgagcggcgaataggtggtgatgccggcacacagaataggtgcagcgctgggcaggtccatgccggccggtatgcgcaccacgaagtgct         >  1:178582‑M1/1‑9 (MQ=255)                                                                                                                                            cccAGGCCACAAGATCGGCATCCTCGGCATGGG‑Cggcctgggccaacgccgtggtgcttgagcggcgaataggtggtgatgccggcacacagaataggtgcagcgctgggcaggtccatgccggccggtatgcgcaccacgaagt           >  6:156312‑M2/1‑34 (MQ=255)                                                                                                                                            cccAGGCCACAAGATCGGCATCCTCGGCATGGG‑Cggcctgggccaacgccgtggtgcttgagcggcgaataggtggtgatgccggcacacagaataggtgcagcgctgggcaggtccatgccggccggtatgcgcaccacgaagt           <  5:156312‑M2/145‑112 (MQ=255)                                                                                                                                             ccAGGCCgcccatgccgaggatgccgatcttgtggcctgggccaacgccgtggtgcttgagcggcgaataggtggtgatgccggcacacagaataggtgcagcgctgggcaggtccatgccggc                                <  4:5529‑M1/124‑118 (MQ=255)                                                                                                                                             ccAGGCCgcccatgccgaggatgccgatcttgtggcctgggccaacgccgtggtgcttgagcggcgaataggtggtgatgccggcacacagaataggtgcagcgctgggcaggtccatgccggc                                >  3:5529‑M1/1‑7 (MQ=255)                                                                                                                                               aGGCCgcccatgccgaggatgccgatcttgtggcctgggccaacgccgtggtgcttgagcggcgaataggtggtgatgccggcacacagaataggtgcagcgctgggcaggtccatgccggccggtatgcgcaccacgaagtgctcgct     <  2:91587‑M1/149‑145 (MQ=255)                                                                                                                                                ggCCACAAGATCGGCATCCTCGGCATGGG‑CGGCCTGGGCCACATGGGCATCAAACTGGCCAAGGCCCTGGGTGCGGAAGTGACCCTGTTTACGCGCTCCC‑AAGCCAAGGCCGAGGAAGCTCGCCGCCAGGGGGCCGACCATGTGATCGt  <  3:303710/149‑1 (MQ=255)                                                                                                                                                  ccgcccatgccgaggatgccgatcttgtggcctgggccaacgccgtggtgcttgagcggcgaataggtggtgatgccggcacacagaataggtgcagcgctgggcaggtccatgccggccggtatgcgcaccacgaagtgctcgctgac  <  6:196041‑M1/149‑148 (MQ=255)                                                                                                                                                   cgcccatgccgaggatgccgatcttgtggcctgggccaacgccgtggtgcttgagcggcgaataggtggtgatgccggcacacagaataggtgcagcgctgggcaggtccatgccggccggtatgcgcaccacgaagtgctcgctgac  >  2:4336‑M1/1‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                    GGGCGGGTACTCCAGCAGCATCGTGGTCAGCGAGCACTTCGTGGTGCGCATACCGGCCGGCATGGACCTGCCCAGCGCTGCACCTATTCTGTGTGCCGGCATCACCACCTATTCGCCGCTCAAGCACCAC‑GGCGTTGGCCCAGGCCACAAGATCGGCATCCTCGGCATGGG‑CGGCCTGGGCCACATGGGCATCAAACTGGCCAAGGCCCTGGGTGCGGAAGTGACCCTGTTTACGCGCTCCC‑AAGCCAAGGCCGAGGAAGCTCGCCGCCAGGGGGCCGACCATGTGATCGT  >  NC_002947/2773380‑2773670

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.