New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2900970 =	51 (0.940)	5 (0.100)	5/246	NT	9.2%	coding (52/1908 nt)	quiC	3‑dehydroshikimate dehydratase
	?	NC_002947	2901018 =	51 (1.000)					coding (100/1908 nt)	quiC	3‑dehydroshikimate dehydratase

GACTTTACCTGCGAATAATCGATCGTGCCATAAACTGTGACAGGGGTTGTTTGCCCGAATGGCACCGTATTCCTCCAACAACAAGGAACTCCCGCCATGCAGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTGCGCCAGAT‑GTGCGCCGACCTGGGCATTGCCATCACCTTGTTCCAGCCTTTCCGCGA  >  NC_002947/2900823‑2901112                                                                                                                                                    |                                                                                                                                                ttcggcgcggtcgaggtttttctgcaggcggtcacggcggcagccttcaaagtcgcggaaaggctggaacaaggtgatggcaatgcccaggtcggcgcacatctggcgcacctggcgcgggctgccagcgtaatagagcagatcgttct                                                                                                                                                <  5:87721‑M1/2‑1 (MQ=255)    ggcgcggtcgaggtttttctgcaggcggtcacggcggcagccttcaaagtcgcggaaaggctggaacaaggtgatggcaatgcccaggtcggcgcacatctggcgcacctggcgcgggctgccagcgtaatagagcagatcgttCTCg                                                                                                                                              >  2:262140‑M1/145‑148 (MQ=255)      tACCTGCTAATAATCGATCGTGCCATAAACTGTGACAGGGGTTGTTTGCCCGAATGGCACCGTATTCCTCCAACAACAAGGAACTCCCGCCATGCAGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGaa                                                                                                                                            <  4:110203/148‑1 (MQ=255)       aCCTGCGAATAATCGATCGTGCCATAAACTGTGACAGGGGTTGTTTGCCCGAATGGCACCGTATTCCTCCAACAACAAGGAACTCCCGCCATGCAGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAg                                                                                                                                           <  4:328835/148‑1 (MQ=255)         cTGCGAATAATCGATCGTGCCATAAAATGTGACAGGGGTTGTTTGCCCGAATGGCACCGTATTCCTCCAACAACAAGGAACTAACGCCATGAAGCGTTCGATCGCTACATTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGca                                                                                                                                         >  7:287124/1‑147 (MQ=255)              aataatCGATCGTGCCATAAACTGTGACAGGGGTTGTTTGCCCGAATGGCACCGTATTCCTCCAACAACAAGGAACTCCCGCCATGCAGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATcgcc                                                                                                                                   <  5:169092/149‑1 (MQ=255)                         gTGCCATAAACTGTGACAGGGGTTGTTTGCCCGAATGGCACCGTATTCCTCCAACAACAAGGAACTCCCGCCATGCAGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGttt                                                                                                                        <  3:61823/149‑1 (MQ=255)                            ccATAAACTGTGACAGGGGTTGTTTGCCCGAATGGCACCGTATTCCTCCAACAACAAGGAACTCCCGCCATGCAGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGaa                                                                                                                                            >  8:234174/1‑126 (MQ=255)                              aTAAACTGTGACAGGGGTTGTTTGCCCGAATGGCACCGTATTCCTCCAACAACAAGGAACTCCCGCCATGCAGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACg                                                                                                                   >  3:320805/1‑149 (MQ=255)                               tAAACTGTGACAGGGGTTGTTTGCCCGAATGGCACCGTATTCCTCCAACAACAAGGAACTCCCGCCATGCAGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGaa                                                                                                                                            <  6:144737/123‑1 (MQ=255)                               tAAACTGTGACAGGGGTTGTTTGCCCGAATGGCACCGTATTCCTCCAACAACAAGGAACTCCCGCCATGCAGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGaa                                                                                                                                            >  5:144737/1‑123 (MQ=255)                                   cggcggcagccttcaaagtcgcggaaaggctggaacaaggtgatggcaatgcccaggtcggcgcacatctggcgcacctggcgcgggctgccagcgtaatagagcagatcgttCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTc                                                                                                              <  5:276020‑M1/36‑1 (MQ=255)                                   cTGTGACAGGGGTTGTTTGCCCGAATGGCACCGTATTCCTCCAACAACAAGGAACTCCCGCCATGCAGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTc                                                                                                              <  4:256274/149‑1 (MQ=255)                                      tgACAGGGGTTGTTTGCCCGAATGGCACCGTATTCCTCCAACAACAAGGAACTCCCGCCATGCAGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCga                                                                                                            <  6:182136/148‑1 (MQ=255)                                                caaagtcgcggaaaggctggaacaaggtgatggcaatgcccaggtcggcgcacatctggcgcacctggcgcgggctgccagcgtaatagagcagatcgttCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCgag                                                                                                  >  6:87721‑M1/101‑148 (MQ=255)                                                caaagtcgcggaaaggctggaacaaggtgatggcaatgcccaggtcggcgcacatctggcgcacctggcgcgggctgccagcgtaatagagcagatcgttCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCga                                                                                                   >  6:276020‑M1/101‑147 (MQ=255)                                                  tttGCCCGAATGGCACCGTATTCCTCCAACAACAAGGAACTCCCGCCATGCAGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAAc                                                                                               >  3:207557/1‑149 (MQ=255)                                                     gCCCGAATGGCACCGTATTCCTCCAACAACAAGGAACTCCCGCCATGCAGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGAt                                                                                            >  7:97797/1‑149 (MQ=255)                                                      cccGAATGGCACCGTATTCCTCCAACAACAAGGAACTCCCGCCATGCAGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATc                                                                                           <  8:97797/149‑1 (MQ=255)                                                       ccGAATGGCACCGTATTCCTCCAACAACAAGGAACTCCCGCCATGCAGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCt                                                                                                       >  1:39381/1‑136 (MQ=255)                                                       ccGAATGGCACCGTATTCCTCCAACAACAAGGAACTCCCGCCATGCAGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCt                                                                                                       <  2:39381/136‑1 (MQ=255)                                                           aTGGCACCGTATTCCTCCAACAACAAGGAACTCCCGCCATGCAGCGGTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGctc                                                                                      <  7:156306/149‑1 (MQ=255)                                                                    tATTCCTCCAACACCAAGGCACTCCCGCCATGCAGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCt                                                                             <  4:61994/149‑1 (MQ=255)                                                                      ttCCTCCAACAACAAGGAACTCCCGCCATGCAGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTgg                                                                           <  1:177337/149‑1 (MQ=255)                                                                      ttCCTCCAACAACAAGGAACTCCCGCCATGCAGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTgg                                                                           >  2:25647/1‑149 (MQ=255)                                                                        cctccAACAACAAGGAACTCCCGCCATGCAGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTg                                                                            <  2:228812/146‑1 (MQ=255)                                                                        cctccAACAACAAGGAACTCCCGCCATGCAGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTg                                                                            >  1:228812/1‑146 (MQ=255)                                                                        ccgccAACAACAAGGAACTCCCGCCATGCAGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCga                                                                                                   >  8:93063/4‑123 (MQ=255)                                                                        ccaccAACAACAAGGAACTCCCGCCATGCAGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCga                                                                                                   <  7:93063/120‑1 (MQ=255)                                                                         ctccAACAACAAGGAACTCCCGCCATGCAGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGAAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAg                                                                        >  5:13887/1‑149 (MQ=255)                                                                            caacaacaaGGAACTCCCGCCATGCAGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGccc                                                                     >  2:266630/1‑149 (MQ=255)                                                                            caacaacaaGGAACTCCCGCCATGCAGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGccc                                                                     >  8:32164/1‑149 (MQ=255)                                                                            caacaacaaGGAACTCCCGCCATGCAGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGccc                                                                     >  4:57815/1‑149 (MQ=255)                                                                              acaacaaGGAACTCCCGCCATGCAGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCcgc                                                                   >  4:5612/1‑149 (MQ=255)                                                                              acaacaaGGAACTCCCGCCATGCAGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCcgc                                                                   <  4:320805/149‑1 (MQ=255)                                                                                  caaGGAACTCCCGCCATGCAGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCCgcgc                                                                 >  4:223176/1‑147 (MQ=255)                                                                                     ggAACTCCCGCCATGCAGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGt                                                            <  3:223176/149‑1 (MQ=255)                                                                                           cccGCCATGCAGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTgcgc                                                        >  6:210642/1‑147 (MQ=255)                                                                                           cccGCCATGCAGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTGCGCCa                                                      >  6:215420/1‑149 (MQ=255)                                                                                              gCCATGCAGCGTTCGATAGCTATCTTGTCCTTGAGCGGCACTCTGCCGTAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGTCGTCGATATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTGCGCGAGAt                                                   <  8:287124/149‑1 (MQ=255)                                                                                                cATGCAGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTGCGCCAGAt‑gt                                                <  7:82750/149‑1 (MQ=255)                                                                                                   gCAGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCa                                                                         <  5:189204/122‑1 (MQ=255)                                                                                                   gCAGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCa                                                                         >  6:189204/1‑122 (MQ=255)                                                                                                     aGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTGCGCCAGAT‑GTGCGcc                                           <  1:266630/149‑1 (MQ=255)                                                                                                     aGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTGCGCCAGAT‑GTGCGcc                                           <  3:57815/149‑1 (MQ=255)                                                                                                         ggcgcacctggcgcgggctgccagcgtaatagagcagatcgttCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCg                                                                                                    <  8:98214‑M1/46‑1 (MQ=255)                                                                                                         ggcgcacctggcgcgggctgccagcgtaatagagcagatcgttCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCg                                                                                                    >  7:98214‑M1/44‑89 (MQ=255)                                                                                                          tCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTGCGCCAGAT‑GTGCGCCGACCt                                      >  1:12390/1‑149 (MQ=255)                                                                                                           cGATCGCTACCGTCTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTGCGCCAGAT‑GTGCGCCGACCt                                      <  4:207557/148‑1 (MQ=255)                                                                                                                 cTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTGCGCCAGAT‑GTGCGCCGACCTGGGCAtt                               >  1:242711/1‑149 (MQ=255)                                                                                                                    ccGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTGCGCCAGAT‑GTGCGCCGACCTGGGCATTGc                             >  6:227833/1‑148 (MQ=255)                                                                                                                     cGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTGCGCCAGAT‑GTGCGCCGACCTGGGCATTGCCa                           >  2:65733/1‑149 (MQ=255)                                                                                                                           cTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGATATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTGCGCCATATCGTGCGCCGACCTGGGCATTGCCATCAcc                      <  1:195408/149‑1 (MQ=255)                                                                                                                           cTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTGCGCCAGAT‑GTGCGCCGACCTGGGCATTGCCATCAcc                      <  2:12390/148‑1 (MQ=255)                                                                                                                            ttGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTGCGCCAGAT‑GTGCGCCGACCTg                                     <  3:8439/132‑1 (MQ=255)                                                                                                                            ttGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTGCGCCAGAT‑GTGCGCCGACCTg                                     >  4:8439/1‑132 (MQ=255)                                                                                                                            ttGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGACGGTTTTGACGGCGTCGAGATCTTCGAGAACGCTCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTGCGCCAGAT‑GTGAGCCGACCTGGGCATTGCCATCACCtt                    >  3:281636/1‑149 (MQ=255)                                                                                                                                              gAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTGCGCCAGAT‑GTGCGCCGACCTGGGCATTGCCATCACCTTGTTCCAGCCTTTCCGCGa  <  1:25647/149‑1 (MQ=255)                                                                                                                                                 aaGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTGCGCCAGAT‑GTGCGCCGACCTgg                                    >  2:244458/1‑112 (MQ=255)                                                                                                                                                 aaGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATAACGCTGGCAGCCCGCGCCAGGTGCGCCAGAT‑GTGCGCCGACCTgg                                    <  1:244458/112‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                GACTTTACCTGCGAATAATCGATCGTGCCATAAACTGTGACAGGGGTTGTTTGCCCGAATGGCACCGTATTCCTCCAACAACAAGGAACTCCCGCCATGCAGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTGCGCCAGAT‑GTGCGCCGACCTGGGCATTGCCATCACCTTGTTCCAGCCTTTCCGCGA  >  NC_002947/2900823‑2901112

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.