New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2900970 =	51 (0.940)	5 (0.100)	5/246	NT	9.2%	coding (52/1908 nt)	quiC	3‑dehydroshikimate dehydratase
	?	NC_002947	2901018 =	51 (1.000)					coding (100/1908 nt)	quiC	3‑dehydroshikimate dehydratase

TTTGCCCGAATGGCACCGTATTCCTCCAACAACAAGGAACTCCCGCCATGCAGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTGCGCCAGAT‑GTGCGCCGACCTGGGCATTGCCATCACCTTGTTCCAGCCTTTCCGCGACTTTGAAGGCTGCCGCCGTGACCGCCTGCAGAAAAACCTCGACCGCGCCGAA  >  NC_002947/2900872‑2901164                                                                                                                                                   |                                                                                                                                                    tttGCCCGAATGGCACCGTATTCCTCCAACAACAAGGAACTCCCGCCATGCAGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAAc                                                                                                                                                   >  3:207557/1‑149 (MQ=255)    gCCCGAATGGCACCGTATTCCTCCAACAACAAGGAACTCCCGCCATGCAGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGAt                                                                                                                                                >  7:97797/1‑149 (MQ=255)     cccGAATGGCACCGTATTCCTCCAACAACAAGGAACTCCCGCCATGCAGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATc                                                                                                                                               <  8:97797/149‑1 (MQ=255)          aTGGCACCGTATTCCTCCAACAACAAGGAACTCCCGCCATGCAGCGGTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGctc                                                                                                                                          <  7:156306/149‑1 (MQ=255)                   tATTCCTCCAACACCAAGGCACTCCCGCCATGCAGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCt                                                                                                                                 <  4:61994/149‑1 (MQ=255)                     ttCCTCCAACAACAAGGAACTCCCGCCATGCAGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTgg                                                                                                                               <  1:177337/149‑1 (MQ=255)                     ttCCTCCAACAACAAGGAACTCCCGCCATGCAGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTgg                                                                                                                               >  2:25647/1‑149 (MQ=255)                       cctccAACAACAAGGAACTCCCGCCATGCAGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTg                                                                                                                                >  1:228812/1‑146 (MQ=255)                       cctccAACAACAAGGAACTCCCGCCATGCAGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTg                                                                                                                                <  2:228812/146‑1 (MQ=255)                        ctccAACAACAAGGAACTCCCGCCATGCAGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGAAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAg                                                                                                                            >  5:13887/1‑149 (MQ=255)                           caacaacaaGGAACTCCCGCCATGCAGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGccc                                                                                                                         >  4:57815/1‑149 (MQ=255)                           caacaacaaGGAACTCCCGCCATGCAGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGccc                                                                                                                         >  2:266630/1‑149 (MQ=255)                           caacaacaaGGAACTCCCGCCATGCAGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGccc                                                                                                                         >  8:32164/1‑149 (MQ=255)                             acaacaaGGAACTCCCGCCATGCAGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCcgc                                                                                                                       <  4:320805/149‑1 (MQ=255)                             acaacaaGGAACTCCCGCCATGCAGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCcgc                                                                                                                       >  4:5612/1‑149 (MQ=255)                                 caaGGAACTCCCGCCATGCAGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCCgcgc                                                                                                                     >  4:223176/1‑147 (MQ=255)                                    ggAACTCCCGCCATGCAGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGt                                                                                                                <  3:223176/149‑1 (MQ=255)                                          cccGCCATGCAGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTgcgc                                                                                                            >  6:210642/1‑147 (MQ=255)                                          cccGCCATGCAGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTGCGCCa                                                                                                          >  6:215420/1‑149 (MQ=255)                                             gCCATGCAGCGTTCGATAGCTATCTTGTCCTTGAGCGGCACTCTGCCGTAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGTCGTCGATATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTGCGCGAGAt                                                                                                       <  8:287124/149‑1 (MQ=255)                                               cATGCAGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTGCGCCAGAt‑gt                                                                                                    <  7:82750/149‑1 (MQ=255)                                                  gCAGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCa                                                                                                                             <  5:189204/122‑1 (MQ=255)                                                  gCAGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCa                                                                                                                             >  6:189204/1‑122 (MQ=255)                                                    aGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTGCGCCAGAT‑GTGCGcc                                                                                               <  1:266630/149‑1 (MQ=255)                                                    aGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTGCGCCAGAT‑GTGCGcc                                                                                               <  3:57815/149‑1 (MQ=255)                                                         tCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTGCGCCAGAT‑GTGCGCCGACCt                                                                                          >  1:12390/1‑149 (MQ=255)                                                          cGATCGCTACCGTCTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTGCGCCAGAT‑GTGCGCCGACCt                                                                                          <  4:207557/148‑1 (MQ=255)                                                                cTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTGCGCCAGAT‑GTGCGCCGACCTGGGCAtt                                                                                   >  1:242711/1‑149 (MQ=255)                                                                   ccGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTGCGCCAGAT‑GTGCGCCGACCTGGGCATTGc                                                                                 >  6:227833/1‑148 (MQ=255)                                                                    cGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTGCGCCAGAT‑GTGCGCCGACCTGGGCATTGCCa                                                                               >  2:65733/1‑149 (MQ=255)                                                                          cTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGATATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTGCGCCATATCGTGCGCCGACCTGGGCATTGCCATCAcc                                                                          <  1:195408/149‑1 (MQ=255)                                                                          cTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTGCGCCAGAT‑GTGCGCCGACCTGGGCATTGCCATCAcc                                                                          <  2:12390/148‑1 (MQ=255)                                                                           ttGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTGCGCCAGAT‑GTGCGCCGACCTg                                                                                         <  3:8439/132‑1 (MQ=255)                                                                           ttGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTGCGCCAGAT‑GTGCGCCGACCTg                                                                                         >  4:8439/1‑132 (MQ=255)                                                                           ttGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGACGGTTTTGACGGCGTCGAGATCTTCGAGAACGCTCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTGCGCCAGAT‑GTGAGCCGACCTGGGCATTGCCATCACCtt                                                                        >  3:281636/1‑149 (MQ=255)                                                                                             gAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTGCGCCAGAT‑GTGCGCCGACCTGGGCATTGCCATCACCTTGTTCCAGCCTTTCCGCGa                                                      <  1:25647/149‑1 (MQ=255)                                                                                                aaGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTGCGCCAGAT‑GTGCGCCGACCTgg                                                                                        >  2:244458/1‑112 (MQ=255)                                                                                                aaGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATAACGCTGGCAGCCCGCGCCAGGTGCGCCAGAT‑GTGCGCCGACCTgg                                                                                        <  1:244458/112‑1 (MQ=255)                                                                                                   ctcgaagatctcgacgccgtcaaaaccggcggcggcgatggcttcgagAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTGCGCCAGAT‑GTGCGCCGACCTGGGCATTGCCATCACCTTGTTCCAGCCTTTCCGCGACTTTg                                                 >  6:87721‑M2/49‑148 (MQ=255)                                                                                                    tcgaagatctcgacgccgtcaaaaccggcggcggcgatggcttcgagAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTGCGCCAGAT‑GTGCGCCGACCTGGGCATTGCCATCACCTTGTTCCAGCCTTTCCGCGACTTTg                                                 >  6:276020‑M2/48‑147 (MQ=255)                                                                                                    TCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTGCGCCAGAT‑GTGCGCCGACCTGGGCATTGCCATCACCTTGTTCCAGCCTTTCCGCGACTTTg                                                 <  6:160905‑M1/147‑1 (MQ=255)                                                                                                     cgaagatctcgacgccgtcaaaaccggcggcggcgatggcttcgagAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTGCGcc                                                                                                           >  7:98214‑M2/47‑89 (MQ=255)                                                                                                     cgaagatctcgacgccgtcaaaaccggcggcggcgatggcttcgagAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTGCGcc                                                                                                           <  8:98214‑M2/43‑1 (MQ=255)                                                                                                     CGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTGCGCCAGAT‑GTGCGCCGACCTGGGCATTGCCATCACCTTGTTCCAGCCTTTCCGCGACTTTGAAg                                              <  5:10894‑M1/149‑1 (MQ=255)                                                                                                         GCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTGCGCCAGAT‑GTGCGCCGACCTGGGCATTGCCATCACCTTGTTCCAGCCTTTCCGCGACTTTGAAGGCTg                                          >  5:227833‑M1/1‑149 (MQ=255)                                                                                                          ccATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTGCGCCAGAT‑GTGCGCCGACCTGGGCATTGCCATCACCTTGTTCCa                                                                  <  8:68479/124‑1 (MQ=255)                                                                                                          ccATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTGCGCCAGAT‑GTGCGCCGACCTGGGCATTGCCATCACCTTGTTCCa                                                                  >  7:68479/1‑124 (MQ=255)                                                                                                          ccATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTGCGCCAGAT‑GTGCGCCGACCTGGGCATTGCCATCACCTTGTTCCAGCCTTTCCGCGACTTTGAAGGCTgc                                         >  5:250462/1‑149 (MQ=255)                                                                                                            aTCTCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTGCGCCAGAT‑GTGCGCCGACCTGGGCAGTGCCATCACCTTGTTCCAGCCTTTCCGCGACTTTGAAGGCTgccg                                       <  4:281636/149‑1 (MQ=255)                                                                                                            aTCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTGCGCCAGAT‑GTGCGCCGACCTGGGCATTGCCATCACCTTGTTCCAGCCTTTCCGCGACTTTGAAGGCTgccg                                       <  2:242711/149‑1 (MQ=255)                                                                                                             tCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTGAGCCAGAT‑GTGCGCCGACCTGGGCATTGCCATCACCTTGTTCCAGCCTTTCCGCGACTTTGAAGGCTgccgc                                      >  6:169486/1‑149 (MQ=255)                                                                                                               gccgccgccGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTGCGCCAGAT‑GTGCGCCGACCTGGGCATTGCCATCACCTTGTTCCAGCCTTTCCGCGACTTTGAAGGCTGccgccg                                    <  6:10894/149‑1 (MQ=255)                                                                                                               gacgccgtcaaaaccggcggcggcgatggcttcgagAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTGCGCCAGAT‑GTGCGCCGACCTGGGCATTGCCATCACCTTGTTCCAGCCTTTCCGCGACTTTGAAGGCTGccgccg                                    <  5:276020‑M2/113‑1 (MQ=255)                                                                                                                ccgccgccgGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTGCGCCAGAT‑GTGCGCCGACCTGGGCATTGCCATCACCTTGTTCCAGCCTTTCCGCGACTTTGAAGGCTGCCGCCGt                                   >  8:287919/1‑149 (MQ=255)                                                                                                                            ttGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTGCGCCAGAT‑GTGCGCCGACCTGGGCATTGCCATCACCTTGTTCCAGCCTTTCCGCGACTTTGAAGGCTGCCGCCGTGACCGCCTGCa                        <  5:160905/148‑1 (MQ=255)                                                                                                                               aCGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTGCGCCAGAT‑GTGCGCCGACCTGGGCATTGCCATc                                                                             <  6:347550/92‑1 (MQ=255)                                                                                                                               aCGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTGCGCCAGAT‑GTGCGCCGACCTGGGCATTGCCATc                                                                             >  5:347550/1‑92 (MQ=255)                                                                                                                                     tagcgaTCTTCGAGAACGATCTGCTCTATTACGCTGTCCGCCCGCGCCAGGTGCGCCAGAT‑GGGCGCCGACCTTGGCATTGCCATCACCTTGTTACAGCCTTGCCGCGACTTTGAAGGCTGCCGCCGTGACCGCCTGCAGAAAAACCTc              <  7:299862/145‑1 (MQ=255)                                                                                                                                     tCGAGATCTTCGAGAACTATCTGCTCTAGTACGCTGTCAGCCCGCGCCAGGTGCGCCAGAT‑GGTCTACGACCTGGGCATTGCCATCAACTTGTTCCCTCCTTTACGCGACATTGCAGGCTGAACCCGTGACCTCATGCAGCCAAAcca               >  8:299862/1‑147 (MQ=255)                                                                                                                                     tCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTGCGCCAGAT‑GTGCGCCGACCTGGGCATTGCCATCACCTTGTTCCAGCCTTTCCGCGACTTTGAAGGCTGCCGCCGTGACCGCCTGCAGAAAAACCTc              <  6:250462/149‑1 (MQ=255)                                                                                                                                     tCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTGCGCCAGAT‑GTGCGCCGACCTGGGCATTGCCATCACCTTGTTCCAGCCTTTCCGCGACTTTGAAGGCTGCCGCCGTGACCGCCTGCAGAAAAACCTc              <  3:5612/149‑1 (MQ=255)                                                                                                                                       gagaTCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTGCGCCAGAT‑GTGCGCCGACCTGGGCATTGCCATCACCTTGTTCCAGCCTTTCCGCGACTTTGAAGGCTGCCGCCGTGACCGCCTGCAGAAAAACCTCGa            >  1:136102/1‑149 (MQ=255)                                                                                                                                          aTCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTGCGCCAGAT‑GTGCGCCGACCTGGGCATTGCCATCACCTTGTTCCAGCCTTTCCGCGACTTTGAAGGCTGCCGCCGTGACCGCCTGCAGAAAAACCTCGACcg         >  5:273030/1‑149 (MQ=255)                                                                                                                                               cgagAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTGCGCCAGAT‑GTGCGCCGACCTGGGCATTGCCATCACCTTGTTCCAGCCTTTCCGCGACTTTGAAGGCTGCCGCCGTGACCGCCTGCAGAAAAACCTCGACCGCGcc     >  2:262140‑M2/5‑148 (MQ=255)                                                                                                                                                 agAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTGCGCCAGAT‑GTGCGCCGACCTGGGCATTGCCATCACCTTGTTCCAGCCTTTCCGCGACTTTGAAGGCTGCCGCCGTGACCGCCTGCAGAAAAACCTCGACCGCGCCGaa  <  5:87721‑M2/147‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                    TTTGCCCGAATGGCACCGTATTCCTCCAACAACAAGGAACTCCCGCCATGCAGCGTTCGATCGCTACCGTGTCCTTGAGCGGCACTCTGCCGGAAAAGCTCGAAGCCATCGCCGCCGCCGGTTTTGACGGCGTCGAGATCTTCGAGAACGATCTGCTCTATTACGCTGGCAGCCCGCGCCAGGTGCGCCAGAT‑GTGCGCCGACCTGGGCATTGCCATCACCTTGTTCCAGCCTTTCCGCGACTTTGAAGGCTGCCGCCGTGACCGCCTGCAGAAAAACCTCGACCGCGCCGAA  >  NC_002947/2900872‑2901164

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.