New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4082497	59 (1.090)	4 (0.080)	4/248	NT	6.5%	coding (442/924 nt)	PP_3592	RpiR family transcriptional regulator
	?	NC_002947	= 4082542	59 (1.140)					coding (487/924 nt)	PP_3592	RpiR family transcriptional regulator

GCTGGTGGGTGATCGCTTGCAAGATTACCGCCAGAACCAGGACGCCAGCGACAACGCCGGCAGCCTGGAGCTGGAAATCGCCGCCCTGGTGCGCGTACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTGCAACTGGTCGACATCAGCGCCGGGCACTTCGGCGAAGTGCTGCTGGGCCGTGCCG  >  NC_002947/4082349‑4082644                                                                                                                                                     |                                                                                                                                                    gCTGGTGGGTGATCGCTTGCAAGATTACCGCCAGAACCAGGACGCCAGCGACAACGCCGGCAGCCTGGAGCTGGAAATCGCCGCCCTGGTGCGCGTACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGA                                                                                                                                                     <  2:241175‑M1/149‑1 (MQ=255) gCTGGTGGGTGATCGCTTGCAAGATTACCGCCAGAACCAGGACGCCAGCGACAACGCCGGCAGCCTGGAGCTGGAAATCGCCGCCCTGGTGCGCGTACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGA                                                                                                                                                     <  2:21787‑M1/149‑1 (MQ=255)    ggtgggtgATCGCTTGCAAGATTACCGCCAGAACCAGGACGCCAGCGACAACGCCGGCAGCCTGGAGCTGGAAATCGCCGCCCTGGTGCGCGTACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGc                                                                                                                                                   >  8:302980/1‑148 (MQ=255)     gtgggtgATCGCTTGCAAGATTACCGCCAGAACCAGGACGCCAGCGACAACGCCGGCAGCCTGGAGCTGGAAATCGCCGCCCTGGTGCGCGTACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGc                                                                                                                                                   <  7:263559/147‑1 (MQ=255)       gggtgATCGCTTGCAAGATTACCGCCAGAACCAGGACGCCAGCGACAACGCCGGCAGCCTGGAGCTGGAAATCGCCGCCCTGGTGCGCGTACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGc                                                                                                                                               >  1:296966/1‑149 (MQ=255)                cTTGCAAGATTACCGCCAGAACCAGGACGCCAGCGACAACGCCGGCAGCCTGGAGCTGGAAATCGCCGCCCTGGTGCGCGTACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGgtgt                                                                                                                                      <  3:12142/149‑1 (MQ=255)                 ttGCAAGATTACCGCCAGAACCAGGACGCCAGCGACAACGCCGGCAGCCTGGAGCTGGAAATCGCCGCCCTGGTGCGCGTACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAtgccgcgctcggtctg                                                                                                                                     >  1:115704‑M1/1‑133 (MQ=255)                 ttGCAAGATTACCGCCAGAACCAGGACGCCAGCGACAACGCCGGCAGCCTGGAGCTGGAAATCGCCGCCCTGGTGCGCGTACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGtt                                                                                                                                     >  4:151118/1‑149 (MQ=255)                     aaGATTACCGCCAGAACCAGGACGCCAGCGACAACGCCGGCAGCCTGGAGCTGGAAATCGCCGCCCTGGTGCGCGTACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGgt                                                                                                                                        <  4:108309/142‑1 (MQ=255)                     aaGATTACCGCCAGAACCAGGACGCCAGCGACAACGCCGGCAGCCTGGAGCTGGAAATCGCCGCCCTGGTGCGCGTACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGgt                                                                                                                                        >  3:108309/1‑142 (MQ=255)                     aaGATTACCGCCAGAACCAGGACGCCAGCGACAACGCCGGCAGCCTGGAGCTGGAAATCGCCGCCCTGGTGCGCGTACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATc                                                                                                                                 >  5:330361/1‑149 (MQ=255)                         ttACCGCCAGAACCAGGACGCCAGCGACAACGCCGGCAGCCTGGAGCTGGAAATCGCCGCCCTGGTGCGCGTACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCg                                                                                                                             <  6:21809/149‑1 (MQ=255)                         ttACCGCCAGAACCAGGACGCCAGCGACAACGCCGGCAGCCTGGAGCTGGAAATCGCCGCCCTGGTGCGCGTACACGAATACCGCCAGAGCCCCGCCTGGCACAACCTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCg                                                                                                                             >  5:143886/1‑149 (MQ=255)                             cGCCAGAACCAGGACGCCAGCGACAACGCCGGCAGCCTGGAGCTGGAAATCGCCGCCCTGGTGCGCGTACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCtt                                                                                                                         <  6:240143/149‑1 (MQ=255)                              gCCAGAACCAGGACGCCAGCGACAACGCCGGCAGCCTGGAGCTGGAAATCGCCGCCCTGGTGCGCGTACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTc                                                                                                                        <  7:302980/149‑1 (MQ=255)                              gCCAGAACCAGGACGCCAGCGACAACGCCGGCAGCCTGGAGCTGGAAATCGCCGCCCTGGTGCGCGTACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTc                                                                                                                        <  3:252418/149‑1 (MQ=255)                                  gAACCAGGACGCCAGCGACAACGCCGGCAGCCTGGAGCTGGAAATCGCCGCCCTGGTGCGCGTACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGa                                                                                                                    <  8:8620/149‑1 (MQ=255)                                     ccAGGACGCCAGCGACAACGCCGGCAGCCTGGAGCTGGAAATCGCCGCCCTGGTGCGCGTACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGAcc                                                                                                                  >  2:290391/1‑148 (MQ=255)                                     ccAGGACGCCAGCGACAACGCCGGCAGCCTGGAGCTGGAAATCGCCGCCCTGGTGCGCGTACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCg                                                                                                                 <  6:143886/149‑1 (MQ=255)                                            gCCAGCGACAACGCCGGCAGCCTGGAGCTGGAAATCGCCGCCCTGGTGCGCGTACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCgg                                                                                                          >  2:278859/1‑149 (MQ=255)                                              cAGCGACAACGCCGGCAGCCTGGAGCTGGAAATCGCCGCCCTGGTGCGCGTACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAtgccgcgctcggtctggaagccggcgatgaacacccgcggcttgc                                                                                                        <  2:115704‑M1/149‑46 (MQ=255)                                                gCGACAACGCCGGCAGCCTGGAGTTGGAAATCGCCGCCCTGGTGCGCGTACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCAtc                                                                                                      <  8:283256‑M2/149‑3 (MQ=255)                                                     aaCGCCGGCAGCCTGGAGCTGGAAATCGCCGCCCTGGTGCGCGTACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCAt                                                                                                 >  2:295016/1‑149 (MQ=255)                                                     aaCGCCGGCAGCCTGGAGCTGGAAATCGCCGCCCTGGTGCGCGTACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCAt                                                                                                 <  3:105714/149‑1 (MQ=255)                                                      aCGCCGGCAGCCTGGAGCTGGAAATCGCCGCCCTGGTGCGCGTACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCAtg                                                                                                >  5:87350/1‑149 (MQ=255)                                                             cAGCCTGGAGCTGGAAATCGCCGCCCTGGTGCGCGTACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGa                                                                                         <  3:151118/149‑1 (MQ=255)                                                                ccTGGAGCTGGAAATCGCCGCCCTGGTGCGCGTACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAtgccgcgctcggtctggaagccggcgatgaacacccgcggcttgctcgccaggcgttgcg                                                                                         >  1:6011‑M1/1‑86 (MQ=255)                                                                ccTGGAGCTGGAAATCGCCGCCCTGGTGCGCGTACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAtgccgcgctcggtctggaagccggcgatgaacacccgcggcttgctcgccaggcgttgcg                                                                                         <  2:6011‑M1/146‑61 (MQ=255)                                                                    gAGCTGGAAATCGCCGCCCTGGTGCGCGTACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACct                                                                                  <  3:46141/149‑1 (MQ=255)                                                                        tGGAAATCGCCGCCCTGGTGCGCGTACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACctgctg                                                                              >  5:33153/1‑149 (MQ=255)                                                                         ggAAATCGCCGCCCTGGTGCGCGTACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGCGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACctgctg                                                                              >  5:290024/1‑148 (MQ=255)                                                                          gAAATCGCCGCCCTGGTGCGCGTACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACctgctg                                                                              <  6:343769/147‑1 (MQ=255)                                                                          gAAATCGCCGCCCTGGTGCGCGTACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACctgctg                                                                              <  1:278859/147‑1 (MQ=255)                                                                           aaaTCGCCGCCCTGGTGCGCGTACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCaa                                                                           >  8:76935/1‑149 (MQ=255)                                                                            aaTCGCCGCCCTGGTGCGCGTACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCaa                                                                           >  8:236395/1‑148 (MQ=255)                                                                              tCGCCGCCCTGGTGCGCGTACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATAc                                                                        <  7:283256/149‑1 (MQ=255)                                                                                 ccgccCTGGTGCGCGTACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTg                                                                     >  1:165982/1‑149 (MQ=255)                                                                                 ccgccCTGGTGCGCGTACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTg                                                                     >  1:218999/1‑149 (MQ=255)                                                                                             gcgTACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTg                                                         <  2:165982/149‑1 (MQ=255)                                                                                             gcgTACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTg                                                         <  2:218999/149‑1 (MQ=255)                                                                                              cgTACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTGc                                                        <  1:290391/149‑1 (MQ=255)                                                                                                tACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTGCaa                                                      <  7:236395/149‑1 (MQ=255)                                                                                                tACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTGCaa                                                      <  2:296966/149‑1 (MQ=255)                                                                                                   acGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGTAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTGCAACTg                                                   >  1:168637/1‑149 (MQ=255)                                                                                                     gAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTGCAACTGGt                                                 >  4:191383/1‑149 (MQ=255)                                                                                                       aTACCGGCAGAGCCACGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCTAGCCGCGGGTGTTCATCGCATGCTTCCAGAATGAGCGCTTGATCGGCATGTGCATGAGCCTGGTGCTGGAATACGTGAGCGTTg                                                              <  4:209584/134‑1 (MQ=255)                                                                                                       aTACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATg                                                              >  3:209584/1‑134 (MQ=255)                                                                                                           cgacAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGAGCGATGGCGTGCAACTGGTCGACa                                            >  2:170682/4‑148 (MQ=255)                                                                                                           cGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGAt                                                               <  1:338030/129‑1 (MQ=255)                                                                                                           cGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGAt                                                               >  2:338030/1‑129 (MQ=255)                                                                                                                 agCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTGCAACTGGTCGACATCAgcgc                                     <  6:330361/149‑1 (MQ=255)                                                                                                                   ccccGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTGCAACTGGTCGACATCAGCGCCg                                   >  4:121468/1‑149 (MQ=255)                                                                                                                   ccccGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTGCAACTGGTCGACATCAGCGCCg                                   >  7:35317/1‑149 (MQ=255)                                                                                                                   ccccGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTGCAACTGGTCGACATCAGCGCCg                                   >  4:122745/1‑149 (MQ=255)                                                                                                                    cccGCCTGGCACAACGTGGCGCACCGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGCGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTGCAACTGGTCGCCATCAGCGCCgg                                  >  6:345403/1‑149 (MQ=255)                                                                                                                    cccGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTGCAACTGGTCGACATCAGCGCCgg                                  >  6:68480/1‑149 (MQ=255)                                                                                                                       gCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTGCAACTGGTCGACATCAGCGCCGGGc                                >  8:69050/1‑148 (MQ=255)                                                                                                                        ccTGGCACAACGTGGCGCTACGCCTGGAGATCAAGCCGCGGGGGTTCATCGCCGGCTTCCAGACCGAGCTCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTGCAACTTGTCGACATCAGCGCCGGGCAc                              <  6:290024/149‑1 (MQ=255)                                                                                                                        ccTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGTGCCACCTGCTGCAATACCTGCGCGATGGCGTGCAACTGGTCGACATCAGCGCCGGGCAc                              <  2:23751/149‑1 (MQ=255)                                                                                                                         cTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGa                                                                                         >  5:221926/1‑89 (MQ=255)                                                                                                                         cTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGa                                                                                         <  6:221926/89‑1 (MQ=255)                                                                                                                            gCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTGCAACTGGTCGACATCAGCGCCGGGCACTTCg                          <  5:68480/149‑1 (MQ=255)                                                                                                                             cacaACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTGCAACTGGTCGACATCAGCGCCGGGCACTTCgg                         <  3:121468/149‑1 (MQ=255)                                                                                                                              acaACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTGCAACTGGTCGACATCAGCGCCGGGCACTTCGGc                        <  3:191383/149‑1 (MQ=255)                                                                                                                              acaACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTGCAACTGGTCGACATCAGCGCCGGGCACTTCGGc                        >  4:249294/1‑149 (MQ=255)                                                                                                                                aaCGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTGCAACTGGTCGACATCAGCGCCGGGCACTTCGGCg                       >  5:221596/1‑148 (MQ=255)                                                                                                                                aaCGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTGCAACTGGTCGACATCAGCGCCGGGCACTTCGGCGa                      <  8:307737/149‑1 (MQ=255)                                                                                                                                 aCGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTGCAACTGGTCGACATCAGCGCCGGGCACTTCGGCGaa                     <  1:295016/149‑1 (MQ=255)                                                                                                                                       cgcAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCAtcgccaggcgttgcgccacgttgtgccaggcggggctctggcggtattcgtgtacgcgcaccagggcggcgatttccagctccagg                  <  2:6011‑M2/146‑87 (MQ=255)                                                                                                                                       cgcAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCAtcgccaggcgttgcgccacgttgtgccaggcggggctctggcggtattcgtgtacgcgcaccagggcggcgatttccagctccagg                  >  1:6011‑M2/1‑60 (MQ=255)                                                                                                                                                  gCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTGCAACTGGTCGACATCAGCGCCGGGCACTTCGGCGAAGTGCTGCTGGGCCGTGc    <  3:249294/149‑1 (MQ=255)                                                                                                                                                    gAtgccgcgctcggtctggaagccggcgatgaacacccgcggcttgctcgccaggcgttgcgccacgttgtgccaggcggggctctggcggtattcgtgtacgcgcaccagggcggcgatttccaactccaggctgccggcgttgtcgc  <  8:283256‑M1/149‑148 (MQ=255)                                                                                                                                                     |                                                                                                                                                    GCTGGTGGGTGATCGCTTGCAAGATTACCGCCAGAACCAGGACGCCAGCGACAACGCCGGCAGCCTGGAGCTGGAAATCGCCGCCCTGGTGCGCGTACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTGCAACTGGTCGACATCAGCGCCGGGCACTTCGGCGAAGTGCTGCTGGGCCGTGCCG  >  NC_002947/4082349‑4082644

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.