New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4082497	59 (1.090)	4 (0.080)	4/248	NT	6.5%	coding (442/924 nt)	PP_3592	RpiR family transcriptional regulator
	?	NC_002947	= 4082542	59 (1.140)					coding (487/924 nt)	PP_3592	RpiR family transcriptional regulator

GCGACAACGCCGGCAGCCTGGAGCTGGAAATCGCCGCCCTGGTGCGCGTACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTGCAACTGGTCGACATCAGCGCCGGGCACTTCGGCGAAGTGCTGCTGGGCCGTGCCGAAGACAGCGCCCTGGTGGTGTTCGAGGCGCGCCGTTATTCCCG  >  NC_002947/4082396‑4082687                                                                                                                                                   |                                                                                                                                                  gCGACAACGCCGGCAGCCTGGAGTTGGAAATCGCCGCCCTGGTGCGCGTACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCAtc                                                                                                                                                 <  8:283256‑M2/149‑3 (MQ=255)      aaCGCCGGCAGCCTGGAGCTGGAAATCGCCGCCCTGGTGCGCGTACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCAt                                                                                                                                            <  3:105714/149‑1 (MQ=255)      aaCGCCGGCAGCCTGGAGCTGGAAATCGCCGCCCTGGTGCGCGTACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCAt                                                                                                                                            >  2:295016/1‑149 (MQ=255)       aCGCCGGCAGCCTGGAGCTGGAAATCGCCGCCCTGGTGCGCGTACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCAtg                                                                                                                                           >  5:87350/1‑149 (MQ=255)              cAGCCTGGAGCTGGAAATCGCCGCCCTGGTGCGCGTACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGa                                                                                                                                    <  3:151118/149‑1 (MQ=255)                     gAGCTGGAAATCGCCGCCCTGGTGCGCGTACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACct                                                                                                                             <  3:46141/149‑1 (MQ=255)                         tGGAAATCGCCGCCCTGGTGCGCGTACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACctgctg                                                                                                                         >  5:33153/1‑149 (MQ=255)                          ggAAATCGCCGCCCTGGTGCGCGTACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGCGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACctgctg                                                                                                                         >  5:290024/1‑148 (MQ=255)                           gAAATCGCCGCCCTGGTGCGCGTACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACctgctg                                                                                                                         <  1:278859/147‑1 (MQ=255)                           gAAATCGCCGCCCTGGTGCGCGTACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACctgctg                                                                                                                         <  6:343769/147‑1 (MQ=255)                            aaaTCGCCGCCCTGGTGCGCGTACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCaa                                                                                                                      >  8:76935/1‑149 (MQ=255)                             aaTCGCCGCCCTGGTGCGCGTACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCaa                                                                                                                      >  8:236395/1‑148 (MQ=255)                               tCGCCGCCCTGGTGCGCGTACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATAc                                                                                                                   <  7:283256/149‑1 (MQ=255)                                  ccgccCTGGTGCGCGTACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTg                                                                                                                >  1:165982/1‑149 (MQ=255)                                  ccgccCTGGTGCGCGTACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTg                                                                                                                >  1:218999/1‑149 (MQ=255)                                              gcgTACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTg                                                                                                    <  2:218999/149‑1 (MQ=255)                                              gcgTACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTg                                                                                                    <  2:165982/149‑1 (MQ=255)                                               cgTACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTGc                                                                                                   <  1:290391/149‑1 (MQ=255)                                                 tACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTGCaa                                                                                                 <  2:296966/149‑1 (MQ=255)                                                 tACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTGCaa                                                                                                 <  7:236395/149‑1 (MQ=255)                                                    acGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGTAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTGCAACTg                                                                                              >  1:168637/1‑149 (MQ=255)                                                      gAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTGCAACTGGt                                                                                            >  4:191383/1‑149 (MQ=255)                                                        aTACCGGCAGAGCCACGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCTAGCCGCGGGTGTTCATCGCATGCTTCCAGAATGAGCGCTTGATCGGCATGTGCATGAGCCTGGTGCTGGAATACGTGAGCGTTg                                                                                                         <  4:209584/134‑1 (MQ=255)                                                        aTACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATg                                                                                                         >  3:209584/1‑134 (MQ=255)                                                            cgacAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGAGCGATGGCGTGCAACTGGTCGACa                                                                                       >  2:170682/4‑148 (MQ=255)                                                            cGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGAt                                                                                                          >  2:338030/1‑129 (MQ=255)                                                            cGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGAt                                                                                                          <  1:338030/129‑1 (MQ=255)                                                                  agCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTGCAACTGGTCGACATCAgcgc                                                                                <  6:330361/149‑1 (MQ=255)                                                                    ccccGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTGCAACTGGTCGACATCAGCGCCg                                                                              >  7:35317/1‑149 (MQ=255)                                                                    ccccGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTGCAACTGGTCGACATCAGCGCCg                                                                              >  4:121468/1‑149 (MQ=255)                                                                    ccccGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTGCAACTGGTCGACATCAGCGCCg                                                                              >  4:122745/1‑149 (MQ=255)                                                                     cccGCCTGGCACAACGTGGCGCACCGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGCGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTGCAACTGGTCGCCATCAGCGCCgg                                                                             >  6:345403/1‑149 (MQ=255)                                                                     cccGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTGCAACTGGTCGACATCAGCGCCgg                                                                             >  6:68480/1‑149 (MQ=255)                                                                        gCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTGCAACTGGTCGACATCAGCGCCGGGc                                                                           >  8:69050/1‑148 (MQ=255)                                                                         ccTGGCACAACGTGGCGCTACGCCTGGAGATCAAGCCGCGGGGGTTCATCGCCGGCTTCCAGACCGAGCTCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTGCAACTTGTCGACATCAGCGCCGGGCAc                                                                         <  6:290024/149‑1 (MQ=255)                                                                         ccTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGTGCCACCTGCTGCAATACCTGCGCGATGGCGTGCAACTGGTCGACATCAGCGCCGGGCAc                                                                         <  2:23751/149‑1 (MQ=255)                                                                          cTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGa                                                                                                                                    <  6:221926/89‑1 (MQ=255)                                                                          cTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGa                                                                                                                                    >  5:221926/1‑89 (MQ=255)                                                                             gCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTGCAACTGGTCGACATCAGCGCCGGGCACTTCg                                                                     <  5:68480/149‑1 (MQ=255)                                                                              cacaACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTGCAACTGGTCGACATCAGCGCCGGGCACTTCgg                                                                    <  3:121468/149‑1 (MQ=255)                                                                               acaACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTGCAACTGGTCGACATCAGCGCCGGGCACTTCGGc                                                                   >  4:249294/1‑149 (MQ=255)                                                                               acaACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTGCAACTGGTCGACATCAGCGCCGGGCACTTCGGc                                                                   <  3:191383/149‑1 (MQ=255)                                                                                 aaCGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTGCAACTGGTCGACATCAGCGCCGGGCACTTCGGCg                                                                  >  5:221596/1‑148 (MQ=255)                                                                                 aaCGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTGCAACTGGTCGACATCAGCGCCGGGCACTTCGGCGa                                                                 <  8:307737/149‑1 (MQ=255)                                                                                  aCGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTGCAACTGGTCGACATCAGCGCCGGGCACTTCGGCGaa                                                                <  1:295016/149‑1 (MQ=255)                                                                                        cgcAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCAtcgccaggcgttgcgccacgttgtgccaggcggggctctggcggtattcgtgtacgcgcaccagggcggcgatttccagctccagg                                                             >  1:6011‑M2/1‑60 (MQ=255)                                                                                        cgcAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCAtcgccaggcgttgcgccacgttgtgccaggcggggctctggcggtattcgtgtacgcgcaccagggcggcgatttccagctccagg                                                             <  2:6011‑M2/146‑87 (MQ=255)                                                                                                   gCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTGCAACTGGTCGACATCAGCGCCGGGCACTTCGGCGAAGTGCTGCTGGGCCGTGc                                               <  3:249294/149‑1 (MQ=255)                                                                                                       gCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCAtcgccaggcgttgcgccacgttgtgccaggcggggctctggcggtattcgtgtacgcgcaccagggcggcgatttccagctccaggctgccggcgttgtcgctg                                           <  2:115704‑M2/149‑105 (MQ=255)                                                                                                       gCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTGCAACTGGTCGACATCAGCGCCGGGCACTTCGGCGAAGTGCTGCTGGGCCGTGCCGaa                                           <  7:213915/149‑1 (MQ=255)                                                                                                        cAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCCGCTGCAATACCTGCGCGATGGCGTGCAACTGGTCGACATCAGCGCCGGGCACTTCGGCGAAGTGCTGCTGGGCCGTGCCg                                             >  8:10403/1‑146 (MQ=255)                                                                                                               cgGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTGCAACTGGTCGACATCAGCGCCGGGCACTTCGGCGAAGTGCTGCTGGGCCGTGCCGAAGACAgcgc                                   <  2:168637/149‑1 (MQ=255)                                                                                                                    gtTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTGCAACTGGTCGACATCAGCGCCGGGCACTTCGGCGAAGTGCTGCTGGGCCGTGCCGAAGACAGCGCCCtgg                              >  8:54285/1‑149 (MQ=255)                                                                                                                     ttaaTCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTTCAATACCTGCGCGAGGGCGTGCAACTGGTCGACATCAGCGCCGGGCACTTCGGCGAAGTGCTGCTGGGCCGTGCCGAAGACAGCGCCCtggt                             <  5:345403/146‑1 (MQ=255)                                                                                                                       cATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATCCCTGCGCGATGGCGTGCAACTGGTCGACATCAGCGCCGGGCACTTCGGCGAAGTGCTGCTGGGCCGTGCCGAAGACAGCGCCCtggtg                            <  7:69050/148‑1 (MQ=255)                                                                                                                        aTCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTGCAACTGGTCGACATCAGCGCCGGGCACTTCGGCGAAGTGCTGCTGGGCCGTGCCGAAGACAGCGCCCtggtg                            <  3:145679/147‑1 (MQ=255)                                                                                                                        aTCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTGCAACTGGTCGACATCAGCGCCGGGCACTTCGGCGAAGTGCTGCTGGGCCGTGCCGAAGACAGCGCCCtggtg                            >  4:145679/1‑147 (MQ=255)                                                                                                                        aTCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTGCAACTGGTCGACATCAGCGCCGGGCACTTCGGCGAAGTGCTGCTGGGCCGTGCCGAAGACAGCGCCCTggtggt                          >  2:258811/1‑149 (MQ=255)                                                                                                                           gCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTGCAACTGGTCGACATCAGCGCCGGGCACTTCGGCGAAGTGCTGCTGGGCCGTGCCGAAGACAGCGCCCTGGTGgtgt                        <  1:170682/148‑1 (MQ=255)                                                                                                                            ccGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTGCAACTGGTCGACATCAGCGCCGGGCACTTCGGCGAAGTGCTGCTGGGCCGTGCCGAAGACAGCGCCCTGGTGGTGTTc                      >  5:124617/1‑149 (MQ=255)                                                                                                                            ccGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTGCAACTGGTCGACATCAGCGCCGGGCACTTCGGCGAAGTGCTGCTGGGCCGTGCCGAAGACAGCGCCCTGGTGGTGTTc                      >  3:149339/1‑149 (MQ=255)                                                                                                                                    cAGACCGAGCGCGGCAtcgccaggcgttgcgccacgttgtgccaggcggggctctggcggtattcgtgtacgcgcaccagggcggcgatttccagctccaggctgccggcgttgtcgctggcgtcctggttctggcggtaatcttgcaa              >  1:115704‑M2/1‑16 (MQ=255)                                                                                                                                     aGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTGCAACTGGTCGACATCAGCGCCGGGCACTTCGGCGAAGTGCTGCTGGGCCGTGCCGAAGACAGCGCCCTGGTGGTGTTCGAGgcgcgc             >  7:237664/1‑149 (MQ=255)                                                                                                                                      gACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTGCAACTGGTCGACATCAGCGCCGGGCACTTCGGCGAAGTGCTGCTGGGCCGTGCCGAAGACAGCGCCCTGGTGGTGTTCGAGGCGCGcc            >  8:181074/1‑149 (MQ=255)                                                                                                                                         cGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTGCAACTGGTCGACATCAGCGCCGGGCACTTCGGCGAAGTGCTGCTGGGCCGTGCCGAAGACAGCGCCCtgg                              >  2:97430/1‑128 (MQ=255)                                                                                                                                         cGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTGCAACTGGTCGACATCAGCGCCGGGCACTTCGGCGAAGTGCTGCTGGGCCGTGCCGAAGACAGCGCCCtgg                              <  1:97430/128‑1 (MQ=255)                                                                                                                                             cgcgGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTGCAACTGGTCGACATCAGCGCCGGGCACTTCGGCGAAGTGCTGCTGGGCCGTGCCGAAGACAGCGCCCTGGTGGTGTTCGAGGCGCGCCGTTATTc     <  6:33153/149‑1 (MQ=255)                                                                                                                                               cgGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTGCAACTGGTCGACATCAGCGCCGGGCACTTCGGTGAAGTGCTGCTGGGCCGTGCCGAAGACAGCGCCCTGGTGGTGTTCGAGGCGCGCCGTTATTccc   <  8:35317/149‑1 (MQ=255)                                                                                                                                               cgGCATCGCCATGTGCATGAACCACCTGCTGCAATACCTGCGCGATGGCGTGCAACTGGTCGACATCAGCGCATGGCACTTCGGCGAAGTGCTGCTGGGCCGTGCCGAAGACAGAGCCCTGGTGGTGTTCGAGGCGCGCCCTTATTccc   >  4:41979/1‑149 (MQ=255)                                                                                                                                                ggCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTGCAACTGGTCGACATCAGCGCCGGGCACTTCGGCGAAGTGCTGCTGGGCCGTGCCGAAGACAGCGCCCTGGTGGTGTTCGAGGCGCGCCGTTATTCCCg  >  4:168351/1‑149 (MQ=255)                                                                                                                                                   |                                                                                                                                                  GCGACAACGCCGGCAGCCTGGAGCTGGAAATCGCCGCCCTGGTGCGCGTACACGAATACCGCCAGAGCCCCGCCTGGCACAACGTGGCGCAACGCCTGGCGAGCAAGCCGCGGGTGTTCATCGCCGGCTTCCAGACCGAGCGCGGCATCGCCATGTGCATGAGCCACCTGCTGCAATACCTGCGCGATGGCGTGCAACTGGTCGACATCAGCGCCGGGCACTTCGGCGAAGTGCTGCTGGGCCGTGCCGAAGACAGCGCCCTGGTGGTGTTCGAGGCGCGCCGTTATTCCCG  >  NC_002947/4082396‑4082687

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.