New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4485486	46 (0.850)	4 (0.080)	3/244	NT	8.1%	coding (662/1302 nt)	PP_3977	hypothetical protein
	?	NC_002947	= 4485509	48 (0.950)					coding (685/1302 nt)	PP_3977	hypothetical protein

GACATCGACTTCGGGGATTTGCTGCAGAGCTGCATGGATGACAGTGACAGTAGAAAAACCGAAGCCTACGCTCGCCTCACTGTCGCTATACGCTTGCGCAATCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTTCTCAATCAGGCGACCGTGTATGACCCGAAAAAGCTCGGAATCATCGGTGGCCTGTCCGTAGA  >  NC_002947/4485341‑4485633                                                                                                                                                  |                                                                                                                                                      gACATCGACTTCGGGGATTTGCTGCAGAGCTGCATGGATGACAGTGACAGTAGAAAAACCGAAGCCTACGCTCGCCTCACTGTCGCTATACGCTTGCGCAATCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑Att                                                                                                                                                   <  7:95099/149‑1 (MQ=255)      cGACTTCGGGGATTTGCTGCAGAGCTGCATGGATGACAGTGACAGTAGAAAAACCGAAGCCTACGCTCGCCTCACTGTCGCTATACGCTTGCGCAATCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGct                                                                                                                                              >  2:55117/1‑149 (MQ=255)        aCTTCGGGGATTTGCTGCAGAGCTGCATGGATGACAGTGACAGTAGAAAAACCGAAGCCTACGCTCGCCTCACTGTCGCTATACGCTTGCGCAATCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGctc                                                                                                                                             >  6:194314/1‑148 (MQ=255)            cGGGGATTTGCTGCAGAGCTGCATGGATGACAGTGACAGTAGAAAAACCGAAGCCTACGCTCGCCTCACTGTCGCTATACGCTTGCGCAATCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTaa                                                                                                                                          <  1:55117/147‑1 (MQ=255)              gggATTTGCTGCAGAGCTGCATGGATGACAGTGACAGTAGAAAAACCGAAGCCTACGCTCGCCTCACTGTCGCTATACGCTTGCGCAATCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAg                                                                                                                                      <  5:194314/149‑1 (MQ=255)               ggATATGATGAAGAGCTGCATGCATGACAGTTACAGTACAAAAACCGAAGCCTACGCTCGCCTCACTGTCGCTATACGCTTGCGCATTCTCGACTCCGAATACAGTCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGa                                                                                                                                       <  8:188883/147‑1 (MQ=255)                 aTTTGCTGCAGAGCTGCATGGATGACAGTGACAGTAGAAAAACCGAAGCCTACGCTCGCCTCACTGTCGCTATACGCTTGCGCAATCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTc                                                                                                                                   >  7:160872/1‑149 (MQ=255)                         cAGAGCTGCATGGATGACAGTGACAGTAGAAAAACCGAAGCCTACGCTCGCCTCACTGTCGCTATACGCTTGCGCAATCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCtgc                                                                                                                            >  5:278782‑M2/1‑145 (MQ=255)                              cTGCATGGATGACAGTGACAGTAGAAAAACCGAAGCCTACGCTCGCCTCACTGTCGCTATACGCTTGCGCAATCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCAggccgagctccttagagctcaattgcttcagt                                                                                                                       <  7:167989‑M1/149‑33 (MQ=255)                                 cATGGATGACAGTGACAGTAGAAAAACCGAAGCCTACGCTCGCCTCACTGTCGCTATACGCTTGCGCAATCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCAggccgagctccttagagctcaattgcttcagt                                                                                                                       <  8:117314‑M1/146‑33 (MQ=255)                                 cATGGATGACAGTGACAGTAGAAAAACCGAAGCCTACGCTCGCCTCACTGTCGCTATACGCTTGCGCAATCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCAggccgagctccttagagctcaattgcttcagt                                                                                                                       >  7:117314‑M1/1‑114 (MQ=255)                                 cATGGATGACAGTGACAGTAGAAAAACCGAAGCCTACGCTCGCCTCACTGTCGCTATACGCTTGCGCAATCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAg                                                                                                                   >  2:332116/1‑149 (MQ=255)                                 cATGGATGACAGTGACAGTAGAAAAACCGAAGCCTACGCTCGCCTCACTGTCGCTATACGCTTGCGCAATCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAg                                                                                                                   <  2:60252/149‑1 (MQ=255)                                 cATGGATGACAGTGACAGTAGAAAAACCGAAGCCTACGCTCGCCTCACTGTCGCTATACGCTTGCGCAATCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAg                                                                                                                   <  8:160872/149‑1 (MQ=255)                                  aTGGATGACAGTGACAGTAGAAAAACCGAAGCCTACGCTCGCCTCACTGTCGCTATACGCTTGCGCAATCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAgg                                                                                                                  >  3:210306/1‑149 (MQ=255)                                   tGGATGACAGTGACAGTAGAAAAACCGAAGCCTACGCTCGCCTCACTGTCGCTATACGCTTGCGCAATCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCAggccgagctccttagagctcaattgcttcagtgcaag                                                                                                                  <  4:2501‑M1/149‑38 (MQ=255)                                      aTGACAGTGACAGTAGAAAAACCGAAGCCTACGCTCGCCTCACTGTCGCTATACGCTTGCGCAATCTCGACGCCGAATACAGGAGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCg                                                                                                                                  >  7:190117/1‑129 (MQ=255)                                           agtgacagtAGAAAAACCGAAGCCTACGCTCGCCTCACTGTCGCTATACGCTTGCGCAATCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGtt                                                                                                          >  6:208981/1‑147 (MQ=255)                                           agtgacagtAGAAAAACCGAAGCCTACGCTCGCCTCACTGTCGCTATACGCTTGCGCAATCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGtt                                                                                                          <  5:208981/147‑1 (MQ=255)                                             tgacagtAGAAAAACCGAAGCCTACGCTCGCCTCACTGTCGCTATACGCTTGCGCAATCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGc                                                                                                        >  2:258820/1‑147 (MQ=255)                                               acagtAGAAAAACCGAAGCCTACGCTCGCCTCACTGTCGCTATACGCTTGCGCAATCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCtgcttca                                                                                                                        >  7:321760‑M2/1‑123 (MQ=255)                                               acagtAGAAAAACCGAAGCCTACGCTCGCCTCACTGTCGCTATACGCTTGCGCAATCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCtgcttca                                                                                                                        <  8:321760‑M2/130‑8 (MQ=255)                                                 agtAGAAAAACCGAAGCCTACGCTCGCCTCACTGTCGCTATACGCTTGCGCAATCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCACATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGAc                                                                                                   <  1:258820/149‑1 (MQ=255)                                                   tAGAAAAACCGAAGCCTACGCTCGCCTCACTGTCGCTATACGCTTGCGCAATCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACAtt                                                                                                <  2:234211/149‑1 (MQ=255)                                                     gAAAAACCGAAGCCTACGCTCGCCTCACTGTCGCTATACGCTTGCGCAATCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTgg                                                                                              <  7:49585/149‑1 (MQ=255)                                                     gAAAAACCGAAGCCTACGCTCGCCTCACTGGCGCTATACGCTTGCGCAATCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGTCCTGCTACAGCAAGGCT‑ACGTTGCCAGACATTgg                                                                                              <  6:150604/149‑1 (MQ=255)                                                                gCCTACGCTCGCCTCACTGTCGCTATACGCTTGCGCAATCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTccc                                                                                   <  1:332116/149‑1 (MQ=255)                                                                   tACGCTCGCCTCACTGTCGCTATACGCTTGCGCAATCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTg                                                                                 >  4:85513/1‑148 (MQ=255)                                                                      gCTCGCCTCACTGTCGCTATACGCTTGCGCAATCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGaa                                                                               >  7:166739/1‑147 (MQ=255)                                                                       cTCGCCTCACTGTCGCTATACGCTTGCGCAATCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAagag                                                                            >  3:261070/1‑149 (MQ=255)                                                                       cTCGCCTCACTGTCGCTATACGCTTGCGCAATCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAagag                                                                            <  3:85513/149‑1 (MQ=255)                                                                                   tCGCTATACGCTTGCGCAATCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGtt                                                                <  4:261070/149‑1 (MQ=255)                                                                                     gCTATACGCTTGCGCAATCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTtct                                                              >  7:31806/1‑149 (MQ=255)                                                                                      cTATACGCTTGCGCAATCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTtct                                                              >  7:145648/1‑148 (MQ=255)                                                                                       tataCGCTTGCGCAATCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTtctc                                                             >  3:215492/1‑148 (MQ=255)                                                                                                    aaTCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAgg                                                                           >  8:240516/1‑121 (MQ=255)                                                                                                    aaTCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAgg                                                                           <  7:240516/121‑1 (MQ=255)                                                                                                    aaTCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTTCTCAATCAGGCGACCgt                                               >  4:117859/1‑149 (MQ=255)                                                                                                      tctcGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTTCTCAATCAGGCGACCgtg                                              >  7:320325/1‑148 (MQ=255)                                                                                                          gACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTTCTCAATCAGGCGACCGTGTa                                            <  4:210306/146‑1 (MQ=255)                                                                                                          gACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTTCTCAATCAGGCGACCGTGTAt                                           <  4:215492/147‑1 (MQ=255)                                                                                                                gAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTTCTCAATCAGGCGACCGTGTATGACCCGa                                    >  5:319214/1‑148 (MQ=255)                                                                                                                       ggCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTTCTCAATCAGGCGACCGTGTATGACCCGAAAAAGCTc                            <  3:117859/149‑1 (MQ=255)                                                                                                                        gCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTTCTCAATCAGGCGACCGTGTATGACCCGAAAAAGCTCg                           >  2:234187/1‑149 (MQ=255)                                                                                                                           aTACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTTCTCAATCAGGCGACCGTGTATGAccc                                      >  6:47563/1‑135 (MQ=255)                                                                                                                           aTACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTTCTCAATCAGGCGACCGTGTATGAccc                                      <  5:47563/135‑1 (MQ=255)                                                                                                                               ttCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTTCTCAATCAGGCGACCGTGTATGACCCGAAAAAGCTCGGAatcat                    >  8:216710/1‑149 (MQ=255)                                                                                                                                  aTCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTTCTCAATCAGGCGACCgt                                               >  7:303957/1‑119 (MQ=255)                                                                                                                                  aTCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTTCTCAATCAGGCGACCgt                                               <  8:303957/119‑1 (MQ=255)                                                                                                                                  aTCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTTCTCAATCAGGCGACCGTGTATGACCCGAAAAAGCTCGGAATCATCg                  <  6:319214/148‑1 (MQ=255)                                                                                                                                  aTCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTTCTCAATCAGGCGACCGTGTATGACCCGAAAAAGCTCGGAATCATCg                  <  8:145648/148‑1 (MQ=255)                                                                                                                                     cTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCtgcttcagtgcaaggatgaagtatcgcctgtattcggcgtcgagattgcgcaagcgtatagcgacagtgaggcgagcgtaggcttcggtttttctactgtcactgtcatcca               <  4:2501‑M2/149‑113 (MQ=255)                                                                                                                                      ttGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCTGACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTTCGCAATCAGGCGCCCGTGTATGACCCGAAAAAGCTCGGAATCATCGGTgg              >  1:259101/1‑149 (MQ=255)                                                                                                                                        gctctttaGCA‑ATTGAGCTCTAAGTAGCTAGGCCTGCCTCATCAAGGCT‑TCGTTTCCAGACATTGGGAGTTCGTCCCTGAAGAGGGGTTCGATGTTCTCAATCAGGCGACCGTGTATGACCCGAAAAAGCTCGGAATCATCGGTGGc             <  2:314738/140‑1 (MQ=255)                                                                                                                                          aCTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCtgcttcagtgcaaggatgaagtatcgcctgtattcggcgtcgagattgcgcaagcgtatagcgacagtgaggcgagcgtaggcttcggtttttctactgtcactgtcatccatgcag          <  7:167989‑M2/149‑118 (MQ=255)                                                                                                                                          aCTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCtgcttcagtgcaaggatgaagtatcgcctgtattcggcgtcgagattgcgcaagcgtatagcgacagtgaggcgagcgtaggcttcggtttttctactgtcactgtcatccatg             <  8:117314‑M2/146‑115 (MQ=255)                                                                                                                                          aCTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCtgcttcagtgcaaggatgaagtatcgcctgtattcggcgtcgagattgcgcaagcgtatagcgacagtgaggcgagcgtaggcttcggtttttctactgtcactgtcatccatg             >  7:117314‑M2/1‑32 (MQ=255)                                                                                                                                            tGAAGCAggccgagctccttagagctcaattgcttcagtgcaaggatgaagtatcgcctgtattcggcgtcgagattgcgcaagcgtatagcgacagtgaggcgagcgtaggcttcggtttttctactgt                            <  8:321760‑M1/130‑124 (MQ=255)                                                                                                                                            tGAAGCAggccgagctccttagagctcaattgcttcagtgcaaggatgaagtatcgcctgtattcggcgtcgagattgcgcaagcgtatagcgacagtgaggcgagcgtaggcttcggtttttctactgt                            >  7:321760‑M1/1‑7 (MQ=255)                                                                                                                                            tGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTTCTCAATCAGGCGACCGTGTATGACCCGAAAAAGCTCGGAATCATCGGTGGCCTGTcc       >  5:222044/1‑149 (MQ=255)                                                                                                                                            tGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTTCTCAATCAGGCGACCGTGTATGACCCGAAAAAGCTCGGAATCATCGGTGGCCTGTcc       >  3:9997/1‑149 (MQ=255)                                                                                                                                                gCAggccgagctccttagagctcaattgcttcagtgcaaggatgaagtatcgcctgtattcggcgtcgagattgcgcaagcgtatagcgacagtgaggcgagcgtaggcttcggtttttctactgtcactgtcatccatgcagctctg      >  5:278782‑M1/1‑3 (MQ=255)                                                                                                                                                gCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTTCTCAATCAGGCGACCGTGTATGACCCGAAAAAGCTCGGAATCATCGGTGGCCTGTCCg      >  5:104820/1‑146 (MQ=255)                                                                                                                                                 cA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTTCTCAATCAGGCGACCGTGTATGACCCGAAAAAGCTCGGAATCATCGGTGGCCTGTCCGTaga  <  8:320325/149‑1 (MQ=255)                                                                                                                                                  a‑aTTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTTCTCAATCAGGCGACCGTGTATGACCCGAAAAAGCTCGGAATCATCGGTGGCCTGTCCGTa    <  8:113728/146‑1 (MQ=255)                                                                                                                                                  a‑aTTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTTCTCAATCAGGCGACCGTGTATGACCCGAAAAAGCTCGGAATCATCGGTGGCCTGTCCGTa    >  7:113728/1‑146 (MQ=255)                                                                                                                                                  |                                                                                                                                                      GACATCGACTTCGGGGATTTGCTGCAGAGCTGCATGGATGACAGTGACAGTAGAAAAACCGAAGCCTACGCTCGCCTCACTGTCGCTATACGCTTGCGCAATCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTTCTCAATCAGGCGACCGTGTATGACCCGAAAAAGCTCGGAATCATCGGTGGCCTGTCCGTAGA  >  NC_002947/4485341‑4485633

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.