New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4485486	46 (0.850)	4 (0.080)	3/244	NT	8.1%	coding (662/1302 nt)	PP_3977	hypothetical protein
	?	NC_002947	= 4485509	48 (0.950)					coding (685/1302 nt)	PP_3977	hypothetical protein

CAGAGCTGCATGGATGACAGTGACAGTAGAAAAACCGAAGCCTACGCTCGCCTCACTGTCGCTATACGCTTGCGCAATCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTTCTCAATCAGGCGACCGTGTATGACCCGAAAAAGCTCGGAATCATCGGTGGCCTGTCCGTAGAGGTCTTCCGGCGGCTCGGATTCTT  >  NC_002947/4485365‑4485657                                                                                                                                                  |                                                                                                                                                      cAGAGCTGCATGGATGACAGTGACAGTAGAAAAACCGAAGCCTACGCTCGCCTCACTGTCGCTATACGCTTGCGCAATCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCtgc                                                                                                                                                    >  5:278782‑M2/1‑145 (MQ=255)         cATGGATGACAGTGACAGTAGAAAAACCGAAGCCTACGCTCGCCTCACTGTCGCTATACGCTTGCGCAATCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAg                                                                                                                                           <  8:160872/149‑1 (MQ=255)         cATGGATGACAGTGACAGTAGAAAAACCGAAGCCTACGCTCGCCTCACTGTCGCTATACGCTTGCGCAATCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAg                                                                                                                                           <  2:60252/149‑1 (MQ=255)         cATGGATGACAGTGACAGTAGAAAAACCGAAGCCTACGCTCGCCTCACTGTCGCTATACGCTTGCGCAATCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAg                                                                                                                                           >  2:332116/1‑149 (MQ=255)          aTGGATGACAGTGACAGTAGAAAAACCGAAGCCTACGCTCGCCTCACTGTCGCTATACGCTTGCGCAATCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAgg                                                                                                                                          >  3:210306/1‑149 (MQ=255)                   agtgacagtAGAAAAACCGAAGCCTACGCTCGCCTCACTGTCGCTATACGCTTGCGCAATCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGtt                                                                                                                                  >  6:208981/1‑147 (MQ=255)                   agtgacagtAGAAAAACCGAAGCCTACGCTCGCCTCACTGTCGCTATACGCTTGCGCAATCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGtt                                                                                                                                  <  5:208981/147‑1 (MQ=255)                     tgacagtAGAAAAACCGAAGCCTACGCTCGCCTCACTGTCGCTATACGCTTGCGCAATCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGc                                                                                                                                >  2:258820/1‑147 (MQ=255)                       acagtAGAAAAACCGAAGCCTACGCTCGCCTCACTGTCGCTATACGCTTGCGCAATCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCtgcttca                                                                                                                                                <  8:321760‑M2/130‑8 (MQ=255)                       acagtAGAAAAACCGAAGCCTACGCTCGCCTCACTGTCGCTATACGCTTGCGCAATCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCtgcttca                                                                                                                                                >  7:321760‑M2/1‑123 (MQ=255)                         agtAGAAAAACCGAAGCCTACGCTCGCCTCACTGTCGCTATACGCTTGCGCAATCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCACATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGAc                                                                                                                           <  1:258820/149‑1 (MQ=255)                           tAGAAAAACCGAAGCCTACGCTCGCCTCACTGTCGCTATACGCTTGCGCAATCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACAtt                                                                                                                        <  2:234211/149‑1 (MQ=255)                             gAAAAACCGAAGCCTACGCTCGCCTCACTGTCGCTATACGCTTGCGCAATCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTgg                                                                                                                      <  7:49585/149‑1 (MQ=255)                             gAAAAACCGAAGCCTACGCTCGCCTCACTGGCGCTATACGCTTGCGCAATCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGTCCTGCTACAGCAAGGCT‑ACGTTGCCAGACATTgg                                                                                                                      <  6:150604/149‑1 (MQ=255)                                        gCCTACGCTCGCCTCACTGTCGCTATACGCTTGCGCAATCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTccc                                                                                                           <  1:332116/149‑1 (MQ=255)                                           tACGCTCGCCTCACTGTCGCTATACGCTTGCGCAATCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTg                                                                                                         >  4:85513/1‑148 (MQ=255)                                              gCTCGCCTCACTGTCGCTATACGCTTGCGCAATCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGaa                                                                                                       >  7:166739/1‑147 (MQ=255)                                               cTCGCCTCACTGTCGCTATACGCTTGCGCAATCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAagag                                                                                                    >  3:261070/1‑149 (MQ=255)                                               cTCGCCTCACTGTCGCTATACGCTTGCGCAATCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAagag                                                                                                    <  3:85513/149‑1 (MQ=255)                                                           tCGCTATACGCTTGCGCAATCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGtt                                                                                        <  4:261070/149‑1 (MQ=255)                                                             gCTATACGCTTGCGCAATCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTtct                                                                                      >  7:31806/1‑149 (MQ=255)                                                              cTATACGCTTGCGCAATCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTtct                                                                                      >  7:145648/1‑148 (MQ=255)                                                               tataCGCTTGCGCAATCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTtctc                                                                                     >  3:215492/1‑148 (MQ=255)                                                                            aaTCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAgg                                                                                                   <  7:240516/121‑1 (MQ=255)                                                                            aaTCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAgg                                                                                                   >  8:240516/1‑121 (MQ=255)                                                                            aaTCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTTCTCAATCAGGCGACCgt                                                                       >  4:117859/1‑149 (MQ=255)                                                                              tctcGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTTCTCAATCAGGCGACCgtg                                                                      >  7:320325/1‑148 (MQ=255)                                                                                  gACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTTCTCAATCAGGCGACCGTGTa                                                                    <  4:210306/146‑1 (MQ=255)                                                                                  gACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTTCTCAATCAGGCGACCGTGTAt                                                                   <  4:215492/147‑1 (MQ=255)                                                                                        gAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTTCTCAATCAGGCGACCGTGTATGACCCGa                                                            >  5:319214/1‑148 (MQ=255)                                                                                               ggCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTTCTCAATCAGGCGACCGTGTATGACCCGAAAAAGCTc                                                    <  3:117859/149‑1 (MQ=255)                                                                                                gCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTTCTCAATCAGGCGACCGTGTATGACCCGAAAAAGCTCg                                                   >  2:234187/1‑149 (MQ=255)                                                                                                   aTACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTTCTCAATCAGGCGACCGTGTATGAccc                                                              >  6:47563/1‑135 (MQ=255)                                                                                                   aTACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTTCTCAATCAGGCGACCGTGTATGAccc                                                              <  5:47563/135‑1 (MQ=255)                                                                                                       ttCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTTCTCAATCAGGCGACCGTGTATGACCCGAAAAAGCTCGGAatcat                                            >  8:216710/1‑149 (MQ=255)                                                                                                          aTCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTTCTCAATCAGGCGACCgt                                                                       >  7:303957/1‑119 (MQ=255)                                                                                                          aTCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTTCTCAATCAGGCGACCgt                                                                       <  8:303957/119‑1 (MQ=255)                                                                                                          aTCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTTCTCAATCAGGCGACCGTGTATGACCCGAAAAAGCTCGGAATCATCg                                          <  8:145648/148‑1 (MQ=255)                                                                                                          aTCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTTCTCAATCAGGCGACCGTGTATGACCCGAAAAAGCTCGGAATCATCg                                          <  6:319214/148‑1 (MQ=255)                                                                                                             cTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCtgcttcagtgcaaggatgaagtatcgcctgtattcggcgtcgagattgcgcaagcgtatagcgacagtgaggcgagcgtaggcttcggtttttctactgtcactgtcatcca                                       <  4:2501‑M2/149‑113 (MQ=255)                                                                                                              ttGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCTGACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTTCGCAATCAGGCGCCCGTGTATGACCCGAAAAAGCTCGGAATCATCGGTgg                                      >  1:259101/1‑149 (MQ=255)                                                                                                                gctctttaGCA‑ATTGAGCTCTAAGTAGCTAGGCCTGCCTCATCAAGGCT‑TCGTTTCCAGACATTGGGAGTTCGTCCCTGAAGAGGGGTTCGATGTTCTCAATCAGGCGACCGTGTATGACCCGAAAAAGCTCGGAATCATCGGTGGc                                     <  2:314738/140‑1 (MQ=255)                                                                                                                  aCTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCtgcttcagtgcaaggatgaagtatcgcctgtattcggcgtcgagattgcgcaagcgtatagcgacagtgaggcgagcgtaggcttcggtttttctactgtcactgtcatccatgcag                                  <  7:167989‑M2/149‑118 (MQ=255)                                                                                                                  aCTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCtgcttcagtgcaaggatgaagtatcgcctgtattcggcgtcgagattgcgcaagcgtatagcgacagtgaggcgagcgtaggcttcggtttttctactgtcactgtcatccatg                                     >  7:117314‑M2/1‑32 (MQ=255)                                                                                                                  aCTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCtgcttcagtgcaaggatgaagtatcgcctgtattcggcgtcgagattgcgcaagcgtatagcgacagtgaggcgagcgtaggcttcggtttttctactgtcactgtcatccatg                                     <  8:117314‑M2/146‑115 (MQ=255)                                                                                                                    tGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTTCTCAATCAGGCGACCGTGTATGACCCGAAAAAGCTCGGAATCATCGGTGGCCTGTcc                               >  3:9997/1‑149 (MQ=255)                                                                                                                    tGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTTCTCAATCAGGCGACCGTGTATGACCCGAAAAAGCTCGGAATCATCGGTGGCCTGTcc                               >  5:222044/1‑149 (MQ=255)                                                                                                                        gCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTTCTCAATCAGGCGACCGTGTATGACCCGAAAAAGCTCGGAATCATCGGTGGCCTGTCCg                              >  5:104820/1‑146 (MQ=255)                                                                                                                         cA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTTCTCAATCAGGCGACCGTGTATGACCCGAAAAAGCTCGGAATCATCGGTGGCCTGTCCGTaga                          <  8:320325/149‑1 (MQ=255)                                                                                                                          a‑aTTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTTCTCAATCAGGCGACCGTGTATGACCCGAAAAAGCTCGGAATCATCGGTGGCCTGTCCGTa                            >  7:113728/1‑146 (MQ=255)                                                                                                                          a‑aTTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTTCTCAATCAGGCGACCGTGTATGACCCGAAAAAGCTCGGAATCATCGGTGGCCTGTCCGTa                            <  8:113728/146‑1 (MQ=255)                                                                                                                                  ctctAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTTCTCAATCAGGCGACCGTGTATGACCCGAAAAAGCTCGGAATCATCGGTGGCCTGTCCGTAGAGGTCTTcc                  >  6:189330/1‑149 (MQ=255)                                                                                                                                   tctAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTTCTCAATCAGGCGACCGTGTATGAccc                                                              <  2:20341/104‑1 (MQ=255)                                                                                                                                   tctAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTTCTCAATCAGGCGACCGTGTATGAccc                                                              >  1:20341/1‑104 (MQ=255)                                                                                                                                   tctAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTTCTCAATCAGGCGACCGTGTATGACCCGAAAAAGCTCGGAATCATCGGTGGCCTGTCCGTAGAGGTCTTCcg                 >  4:6552/1‑149 (MQ=255)                                                                                                                                     tAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTCCTCAATCAGGCGACCGTGTATGACCCGAAAAAGCTCGGAATCATCGGTGGCCTGTcc                               >  5:212344/1‑133 (MQ=255)                                                                                                                                     tAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTCCTCAATCAGGCGACCGTGTATGACCCGAAAAAGCTCGGAATCATCGGTGGCCTGTcc                               <  6:212344/133‑1 (MQ=255)                                                                                                                                       aGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTTCTCAATCAGGCGACCGTGTATGACCCGAAAAAGCTCGGAATCATCGGTGGCCt                                   >  6:102463/1‑127 (MQ=255)                                                                                                                                            cTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTTCTCAATCAGGCGACCGTGTATGACCCGAAAAAGCTCGGAATCATCGGTGGCCTGTCCGTAGAGGTCTTCCGGCGGCTCg         >  2:285844/1‑148 (MQ=255)                                                                                                                                                 ccTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTTCTCAATCAGGCGACCGTGTATGACCCGAAAAAGCTCGGAATCATCGGTGGCCTGTCCGTAGAGGTCTTCCGGCGGCTCGGATTCt   <  1:234187/149‑1 (MQ=255)                                                                                                                                                 ccTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTTCTCAATCAGGCGACCGTGTATGACCCGAAAAAGCTCGGAATCATCGGTGGCCTGTCCGTAGAGGTCTTCCGGCGGCTCGGATTCt   <  2:259101/149‑1 (MQ=255)                                                                                                                                                 ccTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTTCTCAATCAGGCGACCGTGTATGACCCGAAAAAGCTCGGAATCATCGGTGGCCTGTCCGTAGAGGTCTTCCGGCGGCTCGGATTCt   <  8:31806/149‑1 (MQ=255)                                                                                                                                                  cTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTTCTCAATCAGGCGACCGTGTATGACCCGAAAAAGCTCGGAATCATCGGTGGCCTGTCCGTAGAGGTCTTCCGGCGGCTCGGATTCtt  <  6:104820/149‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                      CAGAGCTGCATGGATGACAGTGACAGTAGAAAAACCGAAGCCTACGCTCGCCTCACTGTCGCTATACGCTTGCGCAATCTCGACGCCGAATACAGGCGATACTTCATCCTTGCACTGAAGCA‑ATTGAGCTCTAAGGAGCTCGGCCTGCTTCAGCAAGGCT‑ACGTTGCCAGACATTGGGAGATCGTCCCTGAAGAGGGGTTCGATGTTCTCAATCAGGCGACCGTGTATGACCCGAAAAAGCTCGGAATCATCGGTGGCCTGTCCGTAGAGGTCTTCCGGCGGCTCGGATTCTT  >  NC_002947/4485365‑4485657

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.