New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5045338	41 (0.760)	4 (0.080)	3/240	NT	9.0%	intergenic (‑140/+41)	PP_5681/PP_4449	hypothetical protein/hypothetical protein
	?	NC_002947	= 5045384	43 (0.860)					coding (250/255 nt)	PP_4449	hypothetical protein

ACTCACCAATTCTTGCCTGGTGGCTTCGGGCAGGGCTGGGTTGCTGCAACGCCACAGCTTCCCTTTTACAACGAAATATCGACCATCAGGTGTGTGGGGATACGTTAGCATGGAGATCTAGACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCATGTGATTCTTGAGTTTCTTCGGCAAGGATGAGGAGTTCTTCCCAACGGTCTTCGTCTACCA  >  NC_002947/5045193‑5045479                                                                                                                                                  |                                                                                                                                              actcacCAATTCTTGCCTGGTGGCTTCGGTCAGGGCTGGGTTGCTGCAACGCCACAGCTTCCCTTTTACAACGAAATATCGACCATCAGGTGTGTGGGTATACGTTAGCATGGAGATCTAGACAGCTGCCCTACTCTAGGTTCGACa                                                                                                                                              <  3:103521/147‑1 (MQ=255)     acCAATTCTTGCCTGGTGGCTTCGGGCAGGGCTGGGTTGCTGCAACGCCACAGCTTCCCTTTTACAACGAAATATCGACCATCAGGTGTGTGGGGATACGTTAGCATGGAGATCTAGACAGCTGCCCTACTCTAGGTTCGACAGTGctc                                                                                                                                        >  1:331929/1‑149 (MQ=255)       cAATTCTTGCCTGGTGGCTTCTGGCAGGGCTTGGTTGCTGCAACTCCACAGCTTCCCTTTTACTACTAAATATCGACGATCATGTGTGTGGGGATTCGTTAGCATGGTGATCTAGACAGCTGCGCTAATCTAGGTTCGACAGTGCtgtc                                                                                                                                      <  6:190756/149‑1 (MQ=255)              tGCCTGGTGGCTTCGGGCAGGGCTGGGTTGCTGCAACGCCACAGCTTCCCTTTTACAACGAAATATCGACCATCAGGTGTGTGGGGATACGTTAGCATGGAGATCTAGACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGcc                                                                                                                               >  2:109058/1‑149 (MQ=255)                       gCTTCGGGCAGGGCTGGGTTGCTGCAACGCCACAGCTTCCCTTTTACAACGAAATATCGACCATCAGGTGTGTGGGGATACGTTAGCATGGAGATCTAGACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGttcttc                                                                                                                      <  7:201144/149‑1 (MQ=255)                         ttCGGGCAGGGCTGGGTTGCTGCAACGCCACAGCTTCCCTTTTACAACGAAATATCGACCATCAGGTGTGTGGGGATACGTTAGCATGGAGATCTAGACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCt                                                                                                                    >  5:78434/1‑149 (MQ=255)                            gggCAGGGCTGGGTTGCTGCAACGCCACAGCTTCCCTTTTACAACGAAATATCGACCATCAGGTGTGTGGGGATACGTTAGCATGGAGATCTAGACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAg                                                                                                                 <  6:140758/149‑1 (MQ=255)                              gCAGGGCTGGGTTGCTGCAACGCCACAGCTTCCCTTTTACAACGAAATATCGACCATCAGGTGTGTGGGGATACGTTAGCATGGAGATCTAGACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGttcttc                                                                                                                      >  4:173420/1‑142 (MQ=255)                              gCAGGGCTGGGTTGCTGCAACGCCACAGCTTCCCTTTTACAACGAAATATCGACCATCAGGTGTGTGGGGATACGTTAGCATGGAGATCTAGACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGttcttc                                                                                                                      <  3:173420/142‑1 (MQ=255)                                  ggCTGGGTTGCTGCAACGCCACAGCTTACCTTTTACAACGAAATATCGACCATCAGGTGTGTGGGGATACGTTAGAATGGAGATATAGACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTACGCTGCCAAGttatta                                                                                                                      >  6:117508/1‑137 (MQ=255)                                  ggCTGGGTTGATGCAACGGCACAGCTTCCCTTATACAACGAAATATCTACCATCAGGTGTGTGGGGATACGTTAGCATGGAGATCTAGACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGttcttc                                                                                                                      <  5:117508/138‑1 (MQ=255)                                       ggTTGCTGCAACGCCACAGCTTCCCTTTTACAACGAAATATCGACCATCAGGTGTGTGGGGATACGTTAGCATGGAGATCTAGACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGt                                                                                                        <  6:78434/147‑1 (MQ=255)                                        gTTGCTGCAACGCCACAGCTTCCCTTTTACAACGAAATATCGACCATCAGGTGTGTGGGGATACGTTAGCATGGAGATCTAGACAGCTGCCCTACTCTAGGTTCGACggctagcacggagcgcctcaggaagaactgggcagcggagag                                                                                                     >  7:76502‑M1/1‑107 (MQ=255)                                           gctgcAACGCCACAGCTTCCCTTTTACAACGAAATATCGACCATCAGGTGTGTGGGGATACGTTAGCATGGAGATCTAGACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAg                                                                                                   <  1:109058/148‑1 (MQ=255)                                           gctgcAACGCCACAGCTTCCCTTTTACAACGAAATATCGACCATCAGGTGGGGGGGGATACGTTAGCATGGAGAGCTAGCCAGCAGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAg                                                                                                   <  6:317409/148‑1 (MQ=255)                                             tgcAACGCCACAGCTTCCCTTTTACAACGAAATATCGACCATCAGGTGTGTGGGGATACGTTAGCATGGAGATCTAGACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTa                                                                                                    >  8:197681/1‑145 (MQ=255)                                             tgcAACGCCACAGCTTCCCTTTTACAACGAAATATCGACCATCAGGTGTGTGGGGATACGTTAGCATGGAGATCTAGACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTa                                                                                                    <  7:197681/145‑1 (MQ=255)                                                    ccACAGCTTCCCTTTTACAACGAAATATCGACCATCAGGTGTGTGGGGATACGTTAGCATGGAGATCTAGACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCgtcgaac                                                                                          <  1:164765‑M2/148‑8 (MQ=255)                                                    ccACAGCTTCCCTTTTACAACGAAATATCGACCATCAGGTGTGTGGGGATACGTTAGCATGGAGATCTAGACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCgtc                                                                                              >  4:189814‑M2/1‑141 (MQ=255)                                                    ccACAGCTTCCCTTTTACAACGAAATATCGACCATCAGGTGTGTGGGGATACGTTAGCATGGAGATCTAGACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCgtc                                                                                              <  3:189814‑M2/144‑4 (MQ=255)                                                    ccACAGCTTCCCTTTTACAACGAAATATCGACCATCAGGTGTGTGGGGATACGTTAGCATGGAGATCTAGACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTACGTGCTAGCCgtcgaac                                                                                          <  8:31096‑M2/148‑8 (MQ=255)                                                     cacaGCTTCCCTTTTACAACGAAATATCGACCATCAGGTGTGTGGGGATACGTTAGCATGGAGATCTAGACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCgtcgaacc                                                                                         <  7:193389‑M2/148‑9 (MQ=255)                                                     cacaGCTTCCCTTTTACAACGAAATATCGACCATCAGGTGTGTGGGGATACGTTAGCATGGAGATCTAGACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCgtcgaacc                                                                                         <  1:120135‑M2/148‑9 (MQ=255)                                                     cacaGCTTCCCTTTTACAACGAAATATCGACCATCAGGTGTCTGGGGATACGTTAGCATGGAGATCTAGACAGCTGCCATACTCTAGGTTCGACggctagcacggagcgcctcaggaagaacttggcagaggagagcactgtcgaaac                                                                                         >  1:132135‑M1/1‑94 (MQ=255)                                                      agagcTTCCCTTTTACAACGAAATATCGACCATCAGGTGTGTGGGGATACGTTAGCATGGAGATCTAGACAGCTGCCCTACTCTAGGTTCGACggctagcacggagcgcctcaggaagaactgggcagcggagagcactgtcgaaccta                                                                                       <  8:76502‑M1/147‑57 (MQ=255)                                                      acaGCTTCCCTTTTACAACGAAATATCGACCATCAGGTGTGTGGGGATACGTTAGCATGGAGATCTAGACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCgtcgaaccta                                                                                       <  4:170437‑M2/149‑11 (MQ=255)                                                      acaGATTCCCTTTTACAACGAAATATCGACCATCAGGTGTTTGGTGATACGTTAGCATGGAGATCTAGACAGCTGCCCTACTCTAGGTTCGACggctagcacggagcgcctcaggaagaactgggcagcggagagcactgtcgaaccta                                                                                       <  2:132135‑M1/149‑57 (MQ=255)                                                               cTTTTACAACGAAATATCGACCATCAGGTGTGTGGGGATACGTTAGCATGGAGATCTAGACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCGTCGAACCTACCAGACGCt                                                                              >  8:68854/1‑149 (MQ=255)                                                                    aCAACGAAATATCGACCATCAGGTGTGTGGGGATACGTTAGCATGGAGATCTAGACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAg                                                                          <  2:331929/148‑1 (MQ=255)                                                                       aCGAAATATCGACCATCAGGTGTGTGGGGATACGTTAGCATGGAGATCTAGACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAGTCga                                                                      <  2:164765/149‑1 (MQ=255)                                                                        cGAAATATCGACCATCAGGTGTGTGGGGATACGTTAGCATGGAGATCTAGACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTTTTCCTGAGGCGCTCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAGTCgag                                                                     <  1:89692/149‑1 (MQ=255)                                                                                      tCAGGTGTGTGGGGATACGTTAGCATGGAGATCTAGACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCATGTGATTc                                                       >  2:222229/1‑149 (MQ=255)                                                                                          gtgtgtGGGGATACGTTAGCATGGAGATCTAGACAGCTGCCCTTCTCTAGTTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCATGTGATTCTTGa                                                   <  7:53412/149‑1 (MQ=255)                                                                                          gtgtgtGGGGATACGTTAGCATGGAGATCTAGACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCATGTGATTCTTGa                                                   <  3:170437/149‑1 (MQ=255)                                                                                             tgtgGGGATACGTTAGCATGGAGATCTAGACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCATGTGATTCTTGAGtt                                                >  1:2846/1‑149 (MQ=255)                                                                                                   gATACGTTAGCATGGAGATCTAGACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCATGTGATTCTTGAGTTTCTTCg                                          >  6:6721/1‑149 (MQ=255)                                                                                                            gCATGGAGATCTAGACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCATGTGATTCTTGAGTTTCTTCGGCAAGGAt                                  >  2:184467/1‑148 (MQ=255)                                                                                                              aTGGAGATCTAGACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCATGTGATTCTTGAGTTTCTTCGGCAAGGATgag                               <  2:120135/149‑1 (MQ=255)                                                                                                              aTGGAGATCTAGACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCATGTGATTCTTGAGTTTCTTCGGCAAGGATgag                               <  2:2846/149‑1 (MQ=255)                                                                                                               tGGAGATCTAGACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCATGTGATTCTTGAGTTTCTTCGGCAAGGATgag                               >  3:94415/1‑148 (MQ=255)                                                                                                                   gaTCTAGACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCATGTGATTCTTGAGTTTCTTCGGCAAGGATGAGGAGt                           >  7:246172/1‑148 (MQ=255)                                                                                                                     tCTAGACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCATGTGATTCTTGAGTTTCTTCGGCAAGGATGAGGAGttct                        >  4:56258/1‑149 (MQ=255)                                                                                                                       tAGACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCATGTGATTCTTGAGTTTCTTCGGCAAGGATGAGGAGttcttc                      >  2:299159/1‑149 (MQ=255)                                                                                                                       tAGACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCATGTGATTCTTGAGTTTCTTCGGCAAGGATGAGGAGttcttc                      >  6:131071/1‑149 (MQ=255)                                                                                                                        aGACAGCTGCACTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCATGAGGCGCTCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCAAGTGATTCTTGAGTTTCTTCGCCAAGGATGAGGAGttcttca                     >  4:99008/1‑148 (MQ=255)                                                                                                                         gACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCATGTGATTCTTGAGTTTCTTCGGCAAGGATGAGGAGTTCTTcc                     >  2:77515/1‑148 (MQ=255)                                                                                                                               tGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCATGTGATTCTTGAGTTTCTTCGGCAAGGATGAGGAGTTCTTCCCAACGGt              >  5:86377/1‑149 (MQ=255)                                                                                                                               tGCCCTACTCTAGGTTCGACAGTGCTCTAAGCTGCCCAGTTATTACTGAGGCGCTCCGTGCTAGCCGTCGAACCTACCATACGCTCCAGTCGAGAGCGCATTTGATTCTTGAGTTTCTTCGGCAAGGATGAGGAGTTCTTCCAAAAgg               >  4:68628/1‑148 (MQ=255)                                                                                                                                 ccatACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCTTCTAACCTACCAGACGCTACAGTAGAGAGCTCATGTTATTCTTGAGTTTATTCGTCAAGGATGAGGAGTTCTTCCCAACGGTCt            <  3:68628/146‑1 (MQ=255)                                                                                                                                   cTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCATGTGATTCTTGAGTTTCTTCGGCAAGGATGAGGAGTTCTTCCCAACGGTCTTc          >  8:3999/1‑149 (MQ=255)                                                                                                                                   cTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCATGTGATTCTTGAGTTTCTTCGGCAAGGATGAGGAGTTCTTCCCAACGGTCTTc          <  7:68854/149‑1 (MQ=255)                                                                                                                                      ctctAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCATGTGATTCTTGAGTTTCTTCGGCAAGGATGAGGAGTTCTTCCCAACGGTCTTCGTc       <  1:184467/149‑1 (MQ=255)                                                                                                                                         tAGGTTCGACggctagcacggagcgcctcaggaagaactgggcagcggagagcactgtcgaacctagagtagggcagctgtctagatctccatgctaacgtatccccacacacctgatggtcgatatttcgttgtaaaagggaagctgt    <  4:170437‑M1/149‑140 (MQ=255)                                                                                                                                         tAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCgtcgaacctagagtagggcagctgtctagatctccatgctaacgtatccccacacacctgatggtcgatatttcgttgtaaaagggaagctct    <  8:76502‑M2/149‑94 (MQ=255)                                                                                                                                         tAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCgtcgaacctagagtagggcagctgtctagatctccatgctaacgtatcaccaaacacctgatggtcgatatttcgttgtaaaagggaatctgt    <  2:132135‑M2/149‑94 (MQ=255)                                                                                                                                           gtttcgACAGTGCTCTCCTCTGCCAAGTTCTTCCTGAGGCGCTCCGTGCTAGCCgtcgaacctagagtatggcagctgtctagatctccatgctaacgtatccccagacacctgatggtcgatatttcgttgtaaaagggaagctgtg   >  1:132135‑M2/3‑54 (MQ=255)                                                                                                                                           ggTTCGACggctagcacggagcgcctcaggaagaactgggcagcggagagcactgtcgaacctagagtagggcagctgtctagatctccatgctaacgtatccccacacacctgatggtcgatatttcgttgtaaaagggaagctgtg   <  7:193389‑M1/148‑141 (MQ=255)                                                                                                                                           ggTTCGACggctagcacggagcgcctcaggaagaactgggcagcggagagcactgtcgaacctagagtagggcagctgtctagatctccatgctaacgtatccccacacacctgatggtcgatatttcgttgtaaaagggaagctgtg   <  1:120135‑M1/148‑141 (MQ=255)                                                                                                                                           ggTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCATGTGATTCTTGAGTTTCTTCGGCAAGGATGAGGAGTTCTTCCCAACGGTCTTCGTCTac    <  7:31096/147‑1 (MQ=255)                                                                                                                                            gTTCGACggctagcacgtagcgcctcaggaagaactgggcagcggagagcactgtcgaacctagagtagggcagctgtctagatctccatgctaacgtatccccacacacctgatggtcgatatttcgttgtaaaagggaagctgtgg  <  8:31096‑M1/148‑142 (MQ=255)                                                                                                                                            gTTCGACggctagcacggagcgcctcaggaagaactgggcagcggagagcactgtcgaacctagagtagggcagctgtctagatctccatgctaacgtatccccacacacctgatggtcgatatttcgttgtaaaagggaagctgtgg  <  1:164765‑M1/148‑142 (MQ=255)                                                                                                                                                gACggctagcacggagcgcctcaggaagaactgggcagcggagagcactgtcgaacctagagtagggcagctgtctagatctccatgctaacgtatccccacacacctgatggtcgatatttcgttgtaaaagggaagctgtgg  >  4:189814‑M1/1‑3 (MQ=255)                                                                                                                                                gACggctagcacggagcgcctcaggaagaactgggcagcggagagcactgtcgaacctagagtagggcagctgtctagatctccatgctaacgtatccccacacacctgatggtcgatatttcgttgtaaaagggaagctgtgg  <  3:189814‑M1/144‑142 (MQ=255)                                                                                                                                                  |                                                                                                                                              ACTCACCAATTCTTGCCTGGTGGCTTCGGGCAGGGCTGGGTTGCTGCAACGCCACAGCTTCCCTTTTACAACGAAATATCGACCATCAGGTGTGTGGGGATACGTTAGCATGGAGATCTAGACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCATGTGATTCTTGAGTTTCTTCGGCAAGGATGAGGAGTTCTTCCCAACGGTCTTCGTCTACCA  >  NC_002947/5045193‑5045479

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.