New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5045338 | 41 (0.760) | 4 (0.080) | 3/240 | NT | 9.0% | intergenic (‑140/+41) | PP_5681/PP_4449 | hypothetical protein/hypothetical protein |
? | NC_002947 | = 5045384 | 43 (0.860) | coding (250/255 nt) | PP_4449 | hypothetical protein |
CCACAGCTTCCCTTTTACAACGAAATATCGACCATCAGGTGTGTGGGGATACGTTAGCATGGAGATCTAGACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCATGTGATTCTTGAGTTTCTTCGGCAAGGATGAGGAGTTCTTCCCAACGGTCTTCGTCTACCACCCCAGCATCCAGAATCGCCGCGACGTACCCCGTGGCGAGTCCGAAACGATAA > NC_002947/5045244‑5045532 | ccACAGCTTCCCTTTTACAACGAAATATCGACCATCAGGTGTGTGGGGATACGTTAGCATGGAGATCTAGACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCgtcgaac < 1:164765‑M2/148‑8 (MQ=255) ccACAGCTTCCCTTTTACAACGAAATATCGACCATCAGGTGTGTGGGGATACGTTAGCATGGAGATCTAGACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCgtc > 4:189814‑M2/1‑141 (MQ=255) ccACAGCTTCCCTTTTACAACGAAATATCGACCATCAGGTGTGTGGGGATACGTTAGCATGGAGATCTAGACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCgtc < 3:189814‑M2/144‑4 (MQ=255) ccACAGCTTCCCTTTTACAACGAAATATCGACCATCAGGTGTGTGGGGATACGTTAGCATGGAGATCTAGACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTACGTGCTAGCCgtcgaac < 8:31096‑M2/148‑8 (MQ=255) cacaGCTTCCCTTTTACAACGAAATATCGACCATCAGGTGTGTGGGGATACGTTAGCATGGAGATCTAGACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCgtcgaacc < 1:120135‑M2/148‑9 (MQ=255) cacaGCTTCCCTTTTACAACGAAATATCGACCATCAGGTGTGTGGGGATACGTTAGCATGGAGATCTAGACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCgtcgaacc < 7:193389‑M2/148‑9 (MQ=255) acaGCTTCCCTTTTACAACGAAATATCGACCATCAGGTGTGTGGGGATACGTTAGCATGGAGATCTAGACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCgtcgaaccta < 4:170437‑M2/149‑11 (MQ=255) cTTTTACAACGAAATATCGACCATCAGGTGTGTGGGGATACGTTAGCATGGAGATCTAGACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCGTCGAACCTACCAGACGCt > 8:68854/1‑149 (MQ=255) aCAACGAAATATCGACCATCAGGTGTGTGGGGATACGTTAGCATGGAGATCTAGACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAg < 2:331929/148‑1 (MQ=255) aCGAAATATCGACCATCAGGTGTGTGGGGATACGTTAGCATGGAGATCTAGACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAGTCga < 2:164765/149‑1 (MQ=255) cGAAATATCGACCATCAGGTGTGTGGGGATACGTTAGCATGGAGATCTAGACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTTTTCCTGAGGCGCTCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAGTCgag < 1:89692/149‑1 (MQ=255) tCAGGTGTGTGGGGATACGTTAGCATGGAGATCTAGACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCATGTGATTc > 2:222229/1‑149 (MQ=255) gtgtgtGGGGATACGTTAGCATGGAGATCTAGACAGCTGCCCTTCTCTAGTTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCATGTGATTCTTGa < 7:53412/149‑1 (MQ=255) gtgtgtGGGGATACGTTAGCATGGAGATCTAGACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCATGTGATTCTTGa < 3:170437/149‑1 (MQ=255) tgtgGGGATACGTTAGCATGGAGATCTAGACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCATGTGATTCTTGAGtt > 1:2846/1‑149 (MQ=255) gATACGTTAGCATGGAGATCTAGACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCATGTGATTCTTGAGTTTCTTCg > 6:6721/1‑149 (MQ=255) gCATGGAGATCTAGACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCATGTGATTCTTGAGTTTCTTCGGCAAGGAt > 2:184467/1‑148 (MQ=255) aTGGAGATCTAGACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCATGTGATTCTTGAGTTTCTTCGGCAAGGATgag < 2:120135/149‑1 (MQ=255) aTGGAGATCTAGACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCATGTGATTCTTGAGTTTCTTCGGCAAGGATgag < 2:2846/149‑1 (MQ=255) tGGAGATCTAGACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCATGTGATTCTTGAGTTTCTTCGGCAAGGATgag > 3:94415/1‑148 (MQ=255) gaTCTAGACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCATGTGATTCTTGAGTTTCTTCGGCAAGGATGAGGAGt > 7:246172/1‑148 (MQ=255) tCTAGACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCATGTGATTCTTGAGTTTCTTCGGCAAGGATGAGGAGttct > 4:56258/1‑149 (MQ=255) tAGACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCATGTGATTCTTGAGTTTCTTCGGCAAGGATGAGGAGttcttc > 2:299159/1‑149 (MQ=255) tAGACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCATGTGATTCTTGAGTTTCTTCGGCAAGGATGAGGAGttcttc > 6:131071/1‑149 (MQ=255) aGACAGCTGCACTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCATGAGGCGCTCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCAAGTGATTCTTGAGTTTCTTCGCCAAGGATGAGGAGttcttca > 4:99008/1‑148 (MQ=255) gACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCATGTGATTCTTGAGTTTCTTCGGCAAGGATGAGGAGTTCTTcc > 2:77515/1‑148 (MQ=255) tGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCATGTGATTCTTGAGTTTCTTCGGCAAGGATGAGGAGTTCTTCCCAACGGt > 5:86377/1‑149 (MQ=255) tGCCCTACTCTAGGTTCGACAGTGCTCTAAGCTGCCCAGTTATTACTGAGGCGCTCCGTGCTAGCCGTCGAACCTACCATACGCTCCAGTCGAGAGCGCATTTGATTCTTGAGTTTCTTCGGCAAGGATGAGGAGTTCTTCCAAAAgg > 4:68628/1‑148 (MQ=255) ccatACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCTTCTAACCTACCAGACGCTACAGTAGAGAGCTCATGTTATTCTTGAGTTTATTCGTCAAGGATGAGGAGTTCTTCCCAACGGTCt < 3:68628/146‑1 (MQ=255) cTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCATGTGATTCTTGAGTTTCTTCGGCAAGGATGAGGAGTTCTTCCCAACGGTCTTc < 7:68854/149‑1 (MQ=255) cTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCATGTGATTCTTGAGTTTCTTCGGCAAGGATGAGGAGTTCTTCCCAACGGTCTTc > 8:3999/1‑149 (MQ=255) ctctAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCATGTGATTCTTGAGTTTCTTCGGCAAGGATGAGGAGTTCTTCCCAACGGTCTTCGTc < 1:184467/149‑1 (MQ=255) tAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCgtcgaacctagagtagggcagctgtctagatctccatgctaacgtatccccacacacctgatggtcgatatttcgttgtaaaagggaagctct < 8:76502‑M2/149‑94 (MQ=255) tAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCgtcgaacctagagtagggcagctgtctagatctccatgctaacgtatcaccaaacacctgatggtcgatatttcgttgtaaaagggaatctgt < 2:132135‑M2/149‑94 (MQ=255) gtttcgACAGTGCTCTCCTCTGCCAAGTTCTTCCTGAGGCGCTCCGTGCTAGCCgtcgaacctagagtatggcagctgtctagatctccatgctaacgtatccccagacacctgatggtcgatatttcgttgtaaaagggaagctgtg > 1:132135‑M2/3‑54 (MQ=255) ggTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCATGTGATTCTTGAGTTTCTTCGGCAAGGATGAGGAGTTCTTCCCAACGGTCTTCGTCTac < 7:31096/147‑1 (MQ=255) ctctCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCgtcgaacctagagtagggcagctgtctagatctccatgctaacgtatccccacacacctgatggtcgatatttcgttgtaaaagggaagctgtggcgttgcagcaac > 7:76502‑M2/1‑42 (MQ=255) ctcTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCATGTGATTCTTGAGTTTCTTCGGCAAGGATGAGGAGTTCTTCCCAACGGTCTTCGTCTACCACCCCAGCATCCAGAAt < 8:193389/146‑1 (MQ=255) cGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCATGTGATTCTTGAGTTTCTTCGGCAAGGATGAGGAGTTCTTCCCAACGGTCTTCGTCTac < 7:187712/130‑1 (MQ=255) cGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCATGTGATTCTTGAGTTTCTTCGGCAAGGATGAGGAGTTCTTCCCAACGGTCTTCGTCTac > 8:187712/1‑130 (MQ=255) cGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCATGTGATTCTTGAGTTTCTTCGGCAAGGATGAGGAGTTCTTCCCAACGGTCTTCGTCTACCACCCCAGCATCCAGaa < 5:6721/147‑1 (MQ=255) cGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCATGTGATTCTTGAGTTTCTTCGGCAAGGATGAGGAGTTCTTCCCAACGGTCTTCGTCTACCACCCCAGCATCCAGAATc < 7:3999/149‑1 (MQ=255) gCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCATGTGATTCTTGAGTTTCTTCGGCAAGGATGAGGAGTTCTTCCCAACGGTCTTCGTCTACCACCCCAGCATCCAGAATcgccg > 2:244610/1‑149 (MQ=255) cAGTTCTTCCTGAGGCGCTCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCATGTGATTCTTGAGTTTCTTCGGCAAGGATGAGGAGTTCTTCCCAACGGTCTTCGTCTACCACCCCAGCATCCAGAATCGCCGCGa < 5:131071/149‑1 (MQ=255) ccTGAGGCGCTCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCATGTGATTCTTGAGTTTCTTCGGCAAGGATGAGGAGTTCTTCCCAACGGTCTTCGTCTACCACCCCAGCATCCAGAATCGCCACGGGGTAcgtc > 1:187890/1‑146 (MQ=255) cTGAGGCGCTCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCATGTGATTCTTGAGTTTCTTCGGCAAGGATGAGGAGTTCTTCCCAACGGTCTTCGTCTACCACCCCAGCATCCAGAATCGCCGCGACGTAcc < 4:49407/146‑1 (MQ=255) cTGAGGCGCTCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCATGTGATTCTTGAGTTTCTTCGGCAAGGATGAGGAGTTCTTCCCAACGGTCTTCGTCTACCACCCCAGCATCCAGAATCGCCGCGACGTAcc > 3:49407/1‑146 (MQ=255) gAGGCGCTCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCATGTGATTCTCGAGTTTCTTCGGCAAGGATGAGTAGTTCTTCCCAACGGTCTTCGTCTACCACCCCAGCATCCAGAATCGCCGCGACGTACCCCGTg > 5:143398/1‑149 (MQ=255) gcgcTCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCATGTGATTCTTGAGTTTCTTCGGCAAGGATGAGGAGTTCTTCCCAACGGTCTTCGTCTACCACCCCAGCATCCAGAATCGCCGCGACGTACCCCGTGGc > 4:298709/1‑148 (MQ=255) tCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCATGTGATTCTTGAGTTTCTTCGGCAAGGATGAGGAGTTCTTCCCAACGGTCTTCGTCTACCACCCCAGCATCCAGAATCGCCGCGACGTACCCCGTg > 5:331540/1‑142 (MQ=255) tCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCATGTGATTCTTGAGTTTCTTCGGCAAGGATGAGGAGTTCTTCCCAACGGTCTTCGTCTACCACCCCAGCATCCAGAATCGCCGCGACGTACCCCGTg < 6:331540/142‑1 (MQ=255) gTGCTAGCCGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCATGTGATTCTTGAGTTTCTTCGGCAAGGATGAGGAGTTCTTCCCAACGGTCTTCGTCTACCACCCCAGCATCCAGAATCGCCACGGGGTACGTCGCGGCGATTctgg < 2:187890/149‑4 (MQ=255) tGCTAGCCGTCTAACCTACCAGACGCTCCAGTCGAGAGCGCATGTGATTCTTGAGTTTCTTCGGCAAGGATGAGGAGTTCTTCCCAACGGTCTTCGTCTACCACCCCAGCATCGAGAATCGCCGCGACGTACCCCGTGGCGAGTCCGaa < 3:99008/149‑1 (MQ=255) cTAGCCGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCATGTGATTCTTGAGTTTCTTCGGCAAGGATGAGGAGTTCTTCCCAACGGTCTTCGTCTACCACCCCAGCATCCAGAATCGCCGCGACGTACCCCGTGGCGAGTCCGaaa < 3:56258/148‑1 (MQ=255) tAGCCGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCATGTGATTCTTGAGTTTCTTCGGCAAGGATGAGGAGTTCTTCCCAACGGTCTTCGTCTACCACCCCAGCATCCAGAATCGCCGCGACGTACCCCGTGGCGAGTCCGAAAc > 7:311563/1‑148 (MQ=255) gCCGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCATGTGATTCTTGAGTTTCTTCGGCAAGGATGAGGAGTTCTTCCCAACGGTCTTTGTCTACCACCCCAGCATCCAGAATCGCCGCGACGTACCCCGTGGCGAGTCCGAAACGa > 8:48444/1‑148 (MQ=255) gCCGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCATGTGATTCTTGAGTTTCTTCGGCAAGGATGAGGAGTTCTTCCCAACGGTCTTCGTCTACCACCCCAGCATCCAGAATCGCCGCGACGTACCCCGTGGCGAGTCCGAAACGa > 4:169883/1‑148 (MQ=255) cGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCATGTGATTCTTGAGTTTCTTCGGCAAGGATGAGGAGTTCTTCCCAACCGTCTTCGTCTACCACCCCAGCATCCAGAATCGCCGCGACGTACCCCGTGGCGAGTCCGAAACGATaa > 1:172042/1‑149 (MQ=255) | CCACAGCTTCCCTTTTACAACGAAATATCGACCATCAGGTGTGTGGGGATACGTTAGCATGGAGATCTAGACAGCTGCCCTACTCTAGGTTCGACAGTGCTCTCCGCTGCCCAGTTCTTCCTGAGGCGCTCCGTGCTAGCCGTCGAACCTACCAGACGCTCCAGTCGAGAGCGCATGTGATTCTTGAGTTTCTTCGGCAAGGATGAGGAGTTCTTCCCAACGGTCTTCGTCTACCACCCCAGCATCCAGAATCGCCGCGACGTACCCCGTGGCGAGTCCGAAACGATAA > NC_002947/5045244‑5045532 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |