New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5282008 =	64 (1.180)	4 (0.080)	4/252	NT	6.0%	coding (333/720 nt)	pcaH	protocatechuate 3,4‑dioxygenase subunit beta
	?	NC_002947	5282050 =	63 (1.200)					coding (291/720 nt)	pcaH	protocatechuate 3,4‑dioxygenase subunit beta

GCCGGGCGCCAGTCGTTCGGGCCGTTGCGCCATGGGTACGGGCCCGGCTTGATGGTGCGGAAGCTGTAATAGCCGTCACGGTCGGTCAGACACCGCCCAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCACATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCGCCAATGGGCAGGCCACCGTTATTGAAGTTCAGCAGCA  >  NC_002947/5281862‑5282150                                                                                                                                                   |                                                                                                                                               gtccggacttttcccatctgggcttcggcgcccacgaccatgacctgctgctgaacttcaataacggtggcctgcccattggcgagcgcatcatcgtcgccggccgtgtcgtcgaccagtacggcaagcctgtgccgaacactttggtg                                                                                                                                              >  5:37907‑M1/147‑149 (MQ=255) gacGGGCGCCAGGCGGTCGGGGCGTTGCGCCATGGGTACGGGCCCGGCTGGATGGTGCGGAAGCTGTAATAGCCGTCACGGTCGGTCAGACACCGCCCAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTtgtg                                                                                                                                              <  8:317091/147‑1 (MQ=255)  tccggacttttcccatctgcgcttcggcgcccaccaccatgacctgctgctgaacttcaataacggtggcctgcccattggcgagcgcaacatcgtcgccggccgtgacgtcgaccagtacggaaagcctgtgccgaacactttgggg                                                                                                                                              <  4:22558‑M1/3‑3 (MQ=255)  ccGGGCGCCAGTCGTTCGGGCCGTTGCGCCATGGGTACGGGCCCGGCTTGATGGTGCGGAAGCTGTAATAGCCGTCACGGTCGGTCAGACACCGCCCAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTgg                                                                                                                                             <  6:223716/149‑1 (MQ=255)   cGGGCGCCAGTCGTTCGGGCCGTTGCGCCATGGGTACGGGCCCGGCTTGATGGTGCGGAAGCTGTAATAGCCGTCACGGTCGGTCAGACACCGCCCAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGc                                                                                                                                            <  6:265762/149‑1 (MQ=255)     ggacttttcccatctgggcttcggcgcccacgaccatgacctgctgctgaacttcaataacggtggcctgcccattggcgagcgcatcatcgtcgccggccgtgtcgtcgaccagtacggcaagcctgtgccgaacactttggtg                                                                                                                                              <  4:96597‑M1/3‑1 (MQ=255)            gTCGTTCGGGCCGTTGCGCCAGGGGTACGGGCCCGGCTTGATGGTGCGGAAGCTGTAATAGCCGTCACGGTCGGTCAGACACCGCCCAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGgc                                                                                                                                   <  3:165062/149‑1 (MQ=255)                atctgggcttcggcgcccacgaccatgacctgctgctgaacttcaataacggtggcctgcccattggcgagcgcatcatcgtcgccggccgtgtcgtcgaccagtacggcaagcctgtgccgaacactttgGTGGCGATAGCGgccgcc                                                                                                                               <  1:146518‑M1/18‑1 (MQ=255)                    ggCCGTTGCGCCATGGGTACGGGCCCGGCTTGATGGTGCGGAAGCTGTAATAGCCGTCACGGTCGGTCAGACACCGCCCAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCg                                                                                                                           >  1:193637/1‑149 (MQ=255)                     gCCGTTGCGCCATGGGTACGGGCCCGGCTTGATGGTGCGGAAGCTGTAATAGCCGTCACGGTCGGTCAGACACCGCCCAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGt                                                                                                                          >  6:211549/1‑149 (MQ=255)                       cGTTGCGCCATGGGTACGGGCCCGGCTTGATGGTGCGGAAGCTGTAATAGCCGTCACGGTCGGTCAGACACCGCCCAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTg                                                                                                                        <  8:251436/149‑1 (MQ=255)                         ttGCGCCATGGGTACGGGCCCGGCTTGATGGTGCGGAAGCTGTAATAGCCGTCACGGTCGGTCAGACACCGCCCAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGc                                                                                                                      >  6:9149/1‑149 (MQ=255)                             gcCATGGGTACGGGCCCGGCTTGATGGTGCGGAAGCTGTAATAGCCGTCACGGTCGGTCAGACACCGCCCAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGc                                                                                                                  <  1:236576/149‑1 (MQ=255)                              ccATGGGTACGGGCCCGGCTTGATGGTGCGGAAGCTGTAATAGCCGTCACGGTCGGTCAGACACCGCCCAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGc                                                                                                                  >  1:97855/1‑148 (MQ=255)                                    gTACGGGCCCGGCTTGATGGTGCGGAAGCTGTAATAGCCGTCACGGTCGGTCAGACACCGCCCAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCACAtct                                                                                                           >  1:69089/1‑149 (MQ=255)                                       catgacctgctgctgaacttcaataacggtggcctgcccattggcgagcgcatcatcgtcgccggccgtgtcgtcgaccagtacggcaagcctgtgccgaacactttgGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCACATCTcca                                                                                                        <  7:35159‑M1/41‑1 (MQ=255)                                       cGGGCCCGGCTTGATGGTGCGGAAGCTGTAATAGCCGTCACGGTCGGTCAGACACCGCCCAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCACATCTcca                                                                                                        <  5:211549/149‑1 (MQ=255)                                       cGGGCCCGGCTTGATGGTGCGGAAGCTGTAATAGCCGTCACGGTCGGTCAGACACCGCCCAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCACATCTcc                                                                                                         <  5:352892/148‑1 (MQ=255)                                        gggCCCGGCTTGATGGTGCGGAAGCTGTAATAGCCGTCACGGTCGGTCAGACACCGCCCAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCACATCTccac                                                                                                       >  6:278804/1‑149 (MQ=255)                                         tgacctgctgctgaacttcaataacggtggcctgcccattggcgagcgcatcatcgtcgccggccgtgtcgtcgaccagtacggcaagcctgtgccgaacactttgGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCACATCTccacc                                                                                                      >  2:146518‑M1/107‑149 (MQ=255)                                           acctgctgctgaacttcaataacggtggcctgcccattggcgagcgcatcatcgtcgccggccgtgtcgtcgaccagtacggcaagcctgtgccgaacactttgGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCACATCTccacca                                                                                                     >  8:35159‑M1/105‑148 (MQ=255)                                                cTTGATGGTGCGGAAGCTGTAATAGCCGTCACGGTCGGTCAGACACCGCCCAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCACATCTCCACCAAAgtgt                                                                                               <  2:69089/149‑1 (MQ=255)                                                 ttGATGGTGCGGAAGCTGTAATAGCCGTCACGGTCGGTCAGACACCGCCCAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCACATCTCCACCAAAGTGtt                                                                                              >  3:218469/1‑149 (MQ=255)                                                 ttGATGGTGCGGAAGCTGTAATAGCCGTCACGGTCGGTCAGACACCGCCCAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCACATCTCCACCAAAGTGtt                                                                                              >  1:156711/1‑149 (MQ=255)                                                   gATGGTGCGGAAGCTGTAATAGCCGTCACGGTCGGTCAGACACCGCCCAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCACATCTCCACCAAAGTGTTc                                                                                             <  5:278804/148‑1 (MQ=255)                                                        tGCGGAAGCTGTAATAGCCGTCACGGTCGGTCAGACACCGCCCAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTgg                                                                                                                                             <  3:221322/95‑1 (MQ=255)                                                        tGCGGAAGCTGTAATAGCCGTCACGGTCGGTCAGACACCGCCCAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTgg                                                                                                                                             >  4:221322/1‑95 (MQ=255)                                                         gCGGAAGCTGTAATAGCCGTCACGGTCGGTCAGACACCGCCCAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCAACATCTCCCCCAAAGTGTTAGGCACAg                                                                                      >  4:194379/1‑149 (MQ=255)                                                          cGGAAGCTGTAATAGCCGTCACGGTCGGTCAGACACCGCCCAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCACATCTCCACCAAAGTGTTCGGCACAgg                                                                                     >  4:304501/1‑149 (MQ=255)                                                                 tGTAATAGCCGTCACGGTCGGTCAGACACCGCCCAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCACATCTCCACCAAAGTGTTCGGcac                                                                                        >  7:137376/1‑139 (MQ=255)                                                                 tGTAATAGCCGTCACGGTCGGTCAGACACCGCCCAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCACATCTCCACCAAAGTGTTCGGcac                                                                                        <  8:137376/139‑1 (MQ=255)                                                                  gTAATAGCCGTCACGGTCGGTCAGACACCGCCCAACACCACCGAAGTTCGGGTACAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGCTAGCGGCCGCCGGCGTTGGCTTGCCACATCTCCACCAAAGTGTTCGGCACAGGCTTGCCg                                                                              >  8:113239/1‑148 (MQ=255)                                                                      tAGCCGTCACGGTCGGTCAGACACCGCCCAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCACATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTg                                                                         <  2:156711/149‑1 (MQ=255)                                                                      tAGCCGTCACGGTCGGTCAGACACCGCCCAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCACATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTg                                                                         <  3:304501/149‑1 (MQ=255)                                                                         ccGTCACGGTCGGTCAGACACCGCCCAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCACATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGt                                                                       >  6:281675/1‑148 (MQ=255)                                                                         ccGTCACGGTCGGTCAGACACCGCCCAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCACATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGt                                                                       <  5:281675/148‑1 (MQ=255)                                                                            tCACGGTCGGTCAGACACCGCCCAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCACATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTcgac                                                                   >  8:310508/1‑149 (MQ=255)                                                                                ggtcggtcAGACACCGCCCAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCACATCTccac                                                                                                       <  3:270458/109‑1 (MQ=255)                                                                                ggtcggtcAGACACCGCCCAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCACATCTccac                                                                                                       >  4:270458/1‑109 (MQ=255)                                                                                 gtcggtcAGACACCGCCCAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCACATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTAc                                                                           <  2:257494/136‑1 (MQ=255)                                                                                 gtcggtcAGACACCGCCCAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCACATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTAc                                                                           >  1:257494/1‑136 (MQ=255)                                                                                 gtcggtcAGACACCGCCCAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCACATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGacac                                                              <  3:194379/149‑1 (MQ=255)                                                                                    ggtcAGACACCGCCCAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCACATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACAcgg                                                            <  5:9149/148‑1 (MQ=255)                                                                                     gtcAGACACCGCCAAACACCACCGAAGTTCGGGTACAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGGTGGCGTGCCACATCGGCACCAAAGTGTTCGGAACAGGCGTGACGGACTGGTCGAAGACAcgg                                                            >  4:203464/1‑147 (MQ=255)                                                                                              cGCCCAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCACATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTAc                                                                           <  8:276358/123‑1 (MQ=255)                                                                                              cGCCCAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCACATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTAc                                                                           >  7:276358/1‑123 (MQ=255)                                                                                                cccAACAGCACCGAAGTTCGGTTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCACATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCTACGACACGGCCGGCGACgatta                                               <  4:152866/149‑3 (MQ=255)                                                                                                cccAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCACATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGcga                                                     >  4:96505/1‑143 (MQ=255)                                                                                                cccAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCACATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGcga                                                     <  3:96505/143‑1 (MQ=255)                                                                                                 ccAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCACATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACgatgat                                              <  7:310508/149‑1 (MQ=255)                                                                                                        caccGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCACATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCg                                       <  8:78820/149‑1 (MQ=255)                                                                                                         accGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCACATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTcgacg                                                                  >  1:10096/1‑121 (MQ=255)                                                                                                         accGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCACATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTcgacg                                                                  <  2:10096/121‑1 (MQ=255)                                                                                                          ccGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCACATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTcgacga                                                                 <  8:122706/121‑1 (MQ=255)                                                                                                          ccGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCACATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTcgacga                                                                 >  7:122706/1‑121 (MQ=255)                                                                                                           cGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCACATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCGcc                                     >  3:2646/1‑148 (MQ=255)                                                                                                             aaGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCACATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCGCCAAt                                  >  7:258166/1‑149 (MQ=255)                                                                                                               gTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCACATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCGCCAATgg                                <  7:113239/149‑1 (MQ=255)                                                                                                                ttCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCACATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCGCCAATggg                               >  3:22558/1‑149 (MQ=255)                                                                                                                ttCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCACATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCGCCAATggg                               >  4:158641/1‑149 (MQ=255)                                                                                                                   gggTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCACATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGcga                                                     >  8:122385/1‑124 (MQ=255)                                                                                                                   gggTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCACATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGcga                                                     <  7:122385/124‑1 (MQ=255)                                                                                                                    tgTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCACATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCGCCAATGGGCAgg                           <  3:194992/148‑1 (MQ=255)                                                                                                                     gTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCACATCTCCACCAAAGTGTTCGGCACAGGCTTGcc                                                                               >  3:310841/1‑96 (MQ=255)                                                                                                                     gTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCACATCTCCACCAAAGTGTTCGGCACAGGCTTGcc                                                                               <  4:310841/96‑1 (MQ=255)                                                                                                                     gTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCACATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCGCCAATGGGCAGGc                          >  2:112382/1‑149 (MQ=255)                                                                                                                      tCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCACATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCGCCAATGGGCAGGcc                         <  8:258166/149‑1 (MQ=255)                                                                                                                          ggggCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTGGGCTTGCCACATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCGCCAATGGGCAGGCCACCg                     <  2:193637/149‑1 (MQ=255)                                                                                                                                 cAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCACATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCGCCAATGGGCAGGCCACCGTTAtt                <  5:4430/147‑1 (MQ=255)                                                                                                                                 cAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCACATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCGCCAATGGGCAGGCCACCGTTAtt                >  6:4430/1‑147 (MQ=255)                                                                                                                                  aGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCACATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCGCCAATGGGCAGGCCACCGTTATTGaa             <  3:158641/149‑1 (MQ=255)                                                                                                                                    gTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCACATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCGCCAATGGGCAGGCCACCGTTAtt                <  3:46363/144‑1 (MQ=255)                                                                                                                                    gTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCACATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCGCCAATGGGCAGGCCACCGTTAtt                >  4:46363/1‑144 (MQ=255)                                                                                                                                    gTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCACATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCGCCAATGGGCAGGCCACCGTTATTGAAGt           >  6:140982/1‑149 (MQ=255)                                                                                                                                        cGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCACATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCGCCAATGGGCAGGCCACCGTTATTGAAGTTcag       >  3:96597/1‑149 (MQ=255)                                                                                                                                         gATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCACATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCGCCAATGGGCAGGCCACCGTTATTGAAGTTcag       >  1:231319/1‑148 (MQ=255)                                                                                                                                              ttCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCACATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCGCCAATGGGCAGGCCACCGTTATTGAAGTTcagcagca  <  5:290526/148‑1 (MQ=255)                                                                                                                                              ttCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCACATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCGCCAATGGGCAGGCCACCGTTATTGAAGTTcagcag    >  6:290526/1‑146 (MQ=255)                                                                                                                                                   |                                                                                                                                               GCCGGGCGCCAGTCGTTCGGGCCGTTGCGCCATGGGTACGGGCCCGGCTTGATGGTGCGGAAGCTGTAATAGCCGTCACGGTCGGTCAGACACCGCCCAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCACATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCGCCAATGGGCAGGCCACCGTTATTGAAGTTCAGCAGCA  >  NC_002947/5281862‑5282150

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.