New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5282008 =	64 (1.180)	4 (0.080)	4/252	NT	6.0%	coding (333/720 nt)	pcaH	protocatechuate 3,4‑dioxygenase subunit beta
	?	NC_002947	5282050 =	63 (1.200)					coding (291/720 nt)	pcaH	protocatechuate 3,4‑dioxygenase subunit beta

GGCCCGGCTTGATGGTGCGGAAGCTGTAATAGCCGTCACGGTCGGTCAGACACCGCCCAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCA‑CATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCGCCAATGGGCAGGCCACCGTTATTGAAGTTCAGCAGCAGGTCATGGTCGTGGGCGCCGAAGCCCAGATGGGAAAAGTCCGGAC  >  NC_002947/5281902‑5282195                                                                                                                                                      |                                                                                                                                                  tgacctgctgctgaacttcaataacggtggcctgcccattggcgagcgcatcatcgtcgccggccgtgtcgtcgaccagtacggcaagcctgtgccgaacactttgGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCA‑CATCTccacc                                                                                                                                                   >  2:146518‑M1/107‑149 (MQ=255)   acctgctgctgaacttcaataacggtggcctgcccattggcgagcgcatcatcgtcgccggccgtgtcgtcgaccagtacggcaagcctgtgccgaacactttgGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCA‑CATCTccacca                                                                                                                                                  >  8:35159‑M1/105‑148 (MQ=255)        cTTGATGGTGCGGAAGCTGTAATAGCCGTCACGGTCGGTCAGACACCGCCCAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCA‑CATCTCCACCAAAgtgt                                                                                                                                            <  2:69089/149‑1 (MQ=255)         ttGATGGTGCGGAAGCTGTAATAGCCGTCACGGTCGGTCAGACACCGCCCAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCA‑CATCTCCACCAAAGTGtt                                                                                                                                           >  1:156711/1‑149 (MQ=255)         ttGATGGTGCGGAAGCTGTAATAGCCGTCACGGTCGGTCAGACACCGCCCAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCA‑CATCTCCACCAAAGTGtt                                                                                                                                           >  3:218469/1‑149 (MQ=255)           gATGGTGCGGAAGCTGTAATAGCCGTCACGGTCGGTCAGACACCGCCCAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCA‑CATCTCCACCAAAGTGTTc                                                                                                                                          <  5:278804/148‑1 (MQ=255)                 gCGGAAGCTGTAATAGCCGTCACGGTCGGTCAGACACCGCCCAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCAA‑CATCTCCCCCAAAGTGTTAGGCACAg                                                                                                                                   >  4:194379/1‑149 (MQ=255)                  cGGAAGCTGTAATAGCCGTCACGGTCGGTCAGACACCGCCCAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCA‑CATCTCCACCAAAGTGTTCGGCACAgg                                                                                                                                  >  4:304501/1‑149 (MQ=255)                         tGTAATAGCCGTCACGGTCGGTCAGACACCGCCCAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCA‑CATCTCCACCAAAGTGTTCGGcac                                                                                                                                     >  7:137376/1‑139 (MQ=255)                         tGTAATAGCCGTCACGGTCGGTCAGACACCGCCCAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCA‑CATCTCCACCAAAGTGTTCGGcac                                                                                                                                     <  8:137376/139‑1 (MQ=255)                          gTAATAGCCGTCACGGTCGGTCAGACACCGCCCAACACCACCGAAGTTCGGGTACAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGCTAGCGGCCGCCGGCGTTGGCTTGCCA‑CATCTCCACCAAAGTGTTCGGCACAGGCTTGCCg                                                                                                                           >  8:113239/1‑148 (MQ=255)                              tAGCCGTCACGGTCGGTCAGACACCGCCCAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCA‑CATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTg                                                                                                                      <  2:156711/149‑1 (MQ=255)                              tAGCCGTCACGGTCGGTCAGACACCGCCCAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCA‑CATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTg                                                                                                                      <  3:304501/149‑1 (MQ=255)                                 ccGTCACGGTCGGTCAGACACCGCCCAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCA‑CATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGt                                                                                                                    >  6:281675/1‑148 (MQ=255)                                 ccGTCACGGTCGGTCAGACACCGCCCAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCA‑CATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGt                                                                                                                    <  5:281675/148‑1 (MQ=255)                                    tCACGGTCGGTCAGACACCGCCCAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCA‑CATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTcgac                                                                                                                >  8:310508/1‑149 (MQ=255)                                         gtcggtcAGACACCGCCCAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCA‑CATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTAc                                                                                                                        <  2:257494/136‑1 (MQ=255)                                         gtcggtcAGACACCGCCCAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCA‑CATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTAc                                                                                                                        >  1:257494/1‑136 (MQ=255)                                         gtcggtcAGACACCGCCCAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCA‑CATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGacac                                                                                                           <  3:194379/149‑1 (MQ=255)                                            ggtcAGACACCGCCCAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCA‑CATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACAcgg                                                                                                         <  5:9149/148‑1 (MQ=255)                                             gtcAGACACCGCCAAACACCACCGAAGTTCGGGTACAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGGTGGCGTGCCA‑CATCGGCACCAAAGTGTTCGGAACAGGCGTGACGGACTGGTCGAAGACAcgg                                                                                                         >  4:203464/1‑147 (MQ=255)                                                      cGCCCAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCA‑CATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTAc                                                                                                                        >  7:276358/1‑123 (MQ=255)                                                      cGCCCAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCA‑CATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTAc                                                                                                                        <  8:276358/123‑1 (MQ=255)                                                        cccAACAGCACCGAAGTTCGGTTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCA‑CATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCTACGACACGGCCGGCGACgatta                                                                                            <  4:152866/149‑3 (MQ=255)                                                        cccAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCA‑CATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGcga                                                                                                  >  4:96505/1‑143 (MQ=255)                                                        cccAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCA‑CATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGcga                                                                                                  <  3:96505/143‑1 (MQ=255)                                                         ccAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCA‑CATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACgatgat                                                                                           <  7:310508/149‑1 (MQ=255)                                                                caccGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCA‑CATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCg                                                                                    <  8:78820/149‑1 (MQ=255)                                                                 accGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCA‑CATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTcgacg                                                                                                               >  1:10096/1‑121 (MQ=255)                                                                 accGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCA‑CATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTcgacg                                                                                                               <  2:10096/121‑1 (MQ=255)                                                                  ccGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCA‑CATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTcgacga                                                                                                              <  8:122706/121‑1 (MQ=255)                                                                  ccGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCA‑CATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTcgacga                                                                                                              >  7:122706/1‑121 (MQ=255)                                                                   cGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCA‑CATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCGcc                                                                                  >  3:2646/1‑148 (MQ=255)                                                                     aaGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCA‑CATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCGCCAAt                                                                               >  7:258166/1‑149 (MQ=255)                                                                       gTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCA‑CATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCGCCAATgg                                                                             <  7:113239/149‑1 (MQ=255)                                                                        ttCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCA‑CATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCGCCAATggg                                                                            >  4:158641/1‑149 (MQ=255)                                                                        ttCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCA‑CATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCGCCAATggg                                                                            >  3:22558/1‑149 (MQ=255)                                                                           gggTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCA‑CATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGcga                                                                                                  <  7:122385/124‑1 (MQ=255)                                                                           gggTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCA‑CATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGcga                                                                                                  >  8:122385/1‑124 (MQ=255)                                                                            tgTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCA‑CATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCGCCAATGGGCAgg                                                                        <  3:194992/148‑1 (MQ=255)                                                                             gTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCA‑CATCTCCACCAAAGTGTTCGGCACAGGCTTGcc                                                                                                                            <  4:310841/96‑1 (MQ=255)                                                                             gTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCA‑CATCTCCACCAAAGTGTTCGGCACAGGCTTGcc                                                                                                                            >  3:310841/1‑96 (MQ=255)                                                                             gTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCA‑CATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCGCCAATGGGCAGGc                                                                       >  2:112382/1‑149 (MQ=255)                                                                              tCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCA‑CATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCGCCAATGGGCAGGcc                                                                      <  8:258166/149‑1 (MQ=255)                                                                                  ggggCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTGGGCTTGCCA‑CATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCGCCAATGGGCAGGCCACCg                                                                  <  2:193637/149‑1 (MQ=255)                                                                                         cAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCA‑CATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCGCCAATGGGCAGGCCACCGTTAtt                                                             >  6:4430/1‑147 (MQ=255)                                                                                         cAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCA‑CATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCGCCAATGGGCAGGCCACCGTTAtt                                                             <  5:4430/147‑1 (MQ=255)                                                                                          aGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCA‑CATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCGCCAATGGGCAGGCCACCGTTATTGaa                                                          <  3:158641/149‑1 (MQ=255)                                                                                            gTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCA‑CATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCGCCAATGGGCAGGCCACCGTTAtt                                                             >  4:46363/1‑144 (MQ=255)                                                                                            gTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCA‑CATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCGCCAATGGGCAGGCCACCGTTAtt                                                             <  3:46363/144‑1 (MQ=255)                                                                                            gTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCA‑CATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCGCCAATGGGCAGGCCACCGTTATTGAAGt                                                        >  6:140982/1‑149 (MQ=255)                                                                                                cGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCA‑CATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCGCCAATGGGCAGGCCACCGTTATTGAAGTTcag                                                    >  3:96597/1‑149 (MQ=255)                                                                                                 gATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCA‑CATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCGCCAATGGGCAGGCCACCGTTATTGAAGTTcag                                                    >  1:231319/1‑148 (MQ=255)                                                                                                      ttCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCA‑CATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCGCCAATGGGCAGGCCACCGTTATTGAAGTTcagcagca                                               <  5:290526/148‑1 (MQ=255)                                                                                                      ttCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCA‑CATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCGCCAATGGGCAGGCCACCGTTATTGAAGTTcagcag                                                 >  6:290526/1‑146 (MQ=255)                                                                                                          tggtggagatgtggcaagccaacgccggcggccgctatcgccacCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCGCCAATGGGCAGGCCACCGTTATTGAAGTTCAGCAGCAGGt                                            >  8:35159‑M2/45‑148 (MQ=255)                                                                                                           ggtggagatgtggcaagccaacgccggcggccgctatcgccacCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCGCCAATGGGCAGGCCACCGTTATTGAAGTTCAGCAGCAGGTCa                                          >  2:146518‑M2/44‑149 (MQ=255)                                                                                                             tggagatgtggcaagccaacgccggcggccgctatcgccacCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCGCCAATGGGCAGGCCACCGTTATTGAAGTTCAGCAGCAGGTCATg                                        <  7:35159‑M2/108‑1 (MQ=255)                                                                                                              GCGATAGCGGCCGCCGGCGTTGGCTTGCCATCATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCGCCAATGGGCAGGCCACCGTTATTGAAGTTCAGCAGCAGGTCATgg                                       <  1:31551‑M1/149‑1 (MQ=255)                                                                                                                   aGCGGCCGCCGGCGTTGGCTTGCCA‑CATCTCCACCAAAGTGTTCGGCACAGTCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCGCCAATGGGCAGGCCACCGTTATTGAAGTTCAGCAGCAGGTCATGGTCGTg                                  <  4:218469/148‑1 (MQ=255)                                                                                                                           cctgCGTTGGCTTGCCA‑CATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCGCCAATGGGCAGGCCACCGTTATTGAAGTTCAGCAGCAGGTCATGGTCGTggg                                <  4:35137/139‑1 (MQ=255)                                                                                                                           ccgGCGTTGGCTTGCCA‑CATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCGCCAATGGGCAGGCCACCGTTATTGAAGTTCAGCAGCAGGTCATGGTCGTggg                                >  3:35137/1‑142 (MQ=255)                                                                                                                            cgGCGTTGGCTTGCCA‑CATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCGCCAATGGGCAGGCCACCGTTATTGAAGTTCAGCAGCAGGTCATGGTCGTGGGCGCCGAAg                        <  1:112382/149‑1 (MQ=255)                                                                                                                              gCGTTGGCTTGCCA‑CATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCGCCAATGGGCAGGCCACCGTTATTGAAGTTcagcagca                                               >  4:6867/1‑124 (MQ=255)                                                                                                                              gCGTTGGCTTGCCA‑CATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCGCCAATGGGCAGGCCACCGTTATTGAAGTTcagcagca                                               <  3:6867/124‑1 (MQ=255)                                                                                                                              gCGTTGGCTTGCCA‑CATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCGCCAATGGGCAGGCCACCGTTATTGAAGTTCAGCAGCAGGTCATGGTCGTGGGCGCCGAAGcc                      <  2:97855/149‑1 (MQ=255)                                                                                                                                    ggcggccgctatcgccacCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCGCCAATGGGCAGGCCACCGTTATTGAAGTTCAGCAGCAGGTCATGGTCGTGGGCGCCGAAGCCCAGAt                 <  1:146518‑M2/131‑1 (MQ=255)                                                                                                                                         ccA‑CATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCGCCAATGGGCAGGCCACCGTTATTGAAGTTCAGCAGCAGGTCATGGTCGTGGGCGCCGAAGccc                     >  7:315604/1‑139 (MQ=255)                                                                                                                                         ccA‑CATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCGCCAATGGGCAGGCCACCGTTATTGAAGTTCAGCAGCAGGTCATGGTCGTGGGCGCCGAAGccc                     <  8:315604/139‑1 (MQ=255)                                                                                                                                           a‑caTCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCGCCAATGGGCAGGCCACCGTTATTGAAGTTCAGCAGCAGGTCATGGTCGTGGGCGCCGAAGCCCAGATGGGAAAAg         >  6:140364/1‑149 (MQ=255)                                                                                                                                              aTCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCGCCAATGGGCAGGCCACCGTTATTGAAGTTCAGCAGCAGGTCATGGTCGTGGGCGCCGAAGCCCAGATGGGAAAAGTc       <  2:231319/149‑1 (MQ=255)                                                                                                                                                 tcCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCGCCAATGGGCAGGCCACCGTTATTGAAGTTCAGCAGCAGGTCATGGTCGTGGGCGCCGAAGCCCAGATGGGAAAAGTcc      >  1:344542/1‑147 (MQ=255)                                                                                                                                                 tcCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCGCCAATGGGCAGGCCACCGTTATTGAAGTTCAGCAGCAGGTCATGGTCGTGGGCGCCGAAGCCCAGATGGGAAAAGTcc      <  2:344542/147‑1 (MQ=255)                                                                                                                                                   cccCAAAGTGTTCGGCACAGGCTTTCCGTACTGGTCGACGTCACGGCCGGCGACGATGTTGCGCTCGCCAATGGGCAGGCCACCGTTATTGAAGTTCAGCAGCAGGTCATGGTGGTGGGCGCCGAAGCGCAGATGGGAAAAGTCCGGa   <  4:22558‑M2/145‑1 (MQ=255)                                                                                                                                                   cacCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCGCCAATGGGCAGGCCACCGTTATTGAAGTTCAGCAGCAGGTCATGGTCGTGGGCGCCGAAGCCCAGATGGGAAAAGTcc      <  4:96597‑M2/142‑1 (MQ=255)                                                                                                                                                   cacCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCGCCAATGGGCAGGCCACCGTTATTGAAGTTCAGCAGCAGGTCATGGTCGTGGGCGCCGAAGCCCAGATGGGAAAAGTCCGGAc  >  5:37907‑M2/4‑149 (MQ=255)                                                                                                                                                      |                                                                                                                                                  GGCCCGGCTTGATGGTGCGGAAGCTGTAATAGCCGTCACGGTCGGTCAGACACCGCCCAACACCACCGAAGTTCGGGTCCAGGGGCGCCAGGTAGCGATCGTTCTTGTGGCGATAGCGGCCGCCGGCGTTGGCTTGCCA‑CATCTCCACCAAAGTGTTCGGCACAGGCTTGCCGTACTGGTCGACGACACGGCCGGCGACGATGATGCGCTCGCCAATGGGCAGGCCACCGTTATTGAAGTTCAGCAGCAGGTCATGGTCGTGGGCGCCGAAGCCCAGATGGGAAAAGTCCGGAC  >  NC_002947/5281902‑5282195

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.