New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5526980	49 (0.910)	3 (0.060)	3/246	NT	5.5%	coding (493/1134 nt)	PP_4860	mannose‑6‑phosphate isomerase
	?	NC_002947	= 5527008	56 (1.090)					coding (521/1134 nt)	PP_4860	mannose‑6‑phosphate isomerase

CCAAGGCAAGCCGCTGGACCGGCGCAAGGACCTGTATACCCACGCCTTCATCGTGTTCGCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTGGCCGAAGCGTTCCTGCAGGTACTGGCTGTGCGTGACGACGAACATGTCCGCCAGTCGCTGCT  >  NC_002947/5526832‑5527128                                                                                                                                                     |                                                                                                                                                           ccAAGGCAAGCCGCTGGACCGGCGCAAGGACCTGTATACCCACGCCTTCATCGTGTTCGCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCC                                                                                                                                                            >  2:225746‑M1/1‑149 (MQ=255)  cAAGGCAAGCCGCTGGACCGGCGCAAGGACCTGTATACCCACGCCTTCATCGTGTTCGCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCg                                                                                                                                                           >  4:139891/1‑149 (MQ=255)  cAAGGCAAGCCGCTGGACCGGCGCAAGGACCTGTATACCCACGCCTTCATCGTGTTCGCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCg                                                                                                                                                           >  6:102970/1‑149 (MQ=255)    aGGCAAGCCGCTGGACCGGCGCAAGGACCTGTATACCCACGCCTTCATCGTGTTCGCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGt                                                                                                                                                          >  5:306837/1‑148 (MQ=255)     ggCAAGCCGCTGGACCGGCGCAAGGACCTGTATACCCACGCCTTCATCGTGTTCGCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGa                                                                                                                                                        >  8:280698/1‑149 (MQ=255)           ccGCTGGACCGGCGCAAGGACCTGTATACCCACGCCTTCATCGTGTTCGCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATgg                                                                                                                                                  >  6:20927/1‑149 (MQ=255)                  aCCGGCGCAAGGACCTGTATACCCACGCCTTCATCGTGTTCGCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGGAGTTCGCCCGTGACGATGGCCTGT‑‑Ac                                                                                                                                         <  3:139891/149‑1 (MQ=255)                         cAAGGACCTGTATACCCACGCCTTCATCGTGTTCGCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAgcct                                                                                                                                  <  3:249486/149‑1 (MQ=255)                                cTGTATACCCACGCCTTCATCGTGTTCGCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTggg                                                                                                                           >  1:55525‑M2/1‑146 (MQ=255)                                   tataCCCACGCCTTCATCGTGTTCGCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑a                                                                                                                                          >  8:234664/1‑131 (MQ=255)                                   tataCCCACGCCTTCATCGTGTTCGCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTgggc                                                                                                                          >  5:90705‑M2/1‑143 (MQ=255)                                     taCCCACGCCTTCATCGTGTTCGCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCaggcaggcttcgtacaggccatcgtcacgggcgaa                                                                                                                         <  5:154179‑M1/148‑36 (MQ=255)                                     taCCCACGCCTTCATCGTGTTCGCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTgggcgaa                                                                                                                       >  7:280698‑M2/1‑141 (MQ=255)                                        ccACGCCTTCATCGTGTTCGCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCaggcaggcttcgtacaggccatcgtcacggg                                                                                                                             >  5:351709‑M1/1‑110 (MQ=255)                                        ccACGCCTTCATCGTGTTCGCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCaggcaggcttcgtacaggccatcgtcacggg                                                                                                                             <  6:351709‑M1/141‑32 (MQ=255)                                        ccACGCCTTCATCGTGTTCGCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACt                                                                                                                >  4:257974/1‑149 (MQ=255)                                         cACGCCTTCATCGTGTTCGCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATCGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTg                                                                                                               <  5:102970/149‑1 (MQ=255)                                              cTTCATCGTGTTCGCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGGTGGAGTCCACGTTTAATGCCGCGCTGGACATGATCGACCAGCTGTTCGCCCGTGACGATGGCCTGT‑‑a                                                                                                                                          <  6:351646/120‑1 (MQ=255)                                              cTTCATCGTGTTCGCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGcc                                                                                                           >  1:230518/1‑148 (MQ=255)                                              cTTCATCGAGTTCGACTGCGCGCACTACTGCGGCAAAGTGAGCGAAAACCTGGTGGAGTCCACGTTGAATACCGCGCTGCACATCATCGACCACCAGTTCGCCCGTGACCATGGCCTGT‑‑a                                                                                                                                          >  5:351646/1‑120 (MQ=255)                                               ttCATCGTGTTCGCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGa                                                                                                         >  2:158595/1‑149 (MQ=255)                                                tCATCGTGTTCGCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGGTGGGGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGAc                                                                                                        >  2:315287/1‑149 (MQ=255)                                                      tgtTCGCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCgg                                                                                                   >  1:333707/1‑148 (MQ=255)                                                           gCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAgcctgcct                                                                                                                              <  8:124523/119‑1 (MQ=255)                                                           gCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAgcctgcct                                                                                                                              >  7:124523/1‑119 (MQ=255)                                                           gCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACCATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTgg                                                                                             >  4:34534/1‑149 (MQ=255)                                                            ccTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGc                                                                                            <  2:230518/149‑1 (MQ=255)                                                                   gcACTACTGGGGCAAAGTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTg                                                                                      >  2:20951/1‑148 (MQ=255)                                                                       tactGGGGCAAAGTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCa                                                                                    <  2:342576/146‑1 (MQ=255)                                                                       tactGGGGCAAAGTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCa                                                                                    >  1:342576/1‑146 (MQ=255)                                                                            gggCAAAGTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCg                                                                             >  2:107906/1‑148 (MQ=255)                                                                            gggCAAAGTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCg                                                                             >  8:52866/1‑148 (MQ=255)                                                                                  aGTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGc                                                                      <  3:257974/149‑1 (MQ=255)                                                                                   gTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCa                                                                     >  4:21127/1‑149 (MQ=255)                                                                                   gTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCa                                                                     <  1:158595/149‑1 (MQ=255)                                                                                        cgAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTgg                                                               <  2:333707/149‑1 (MQ=255)                                                                                        cgAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTgg                                                               <  3:34534/149‑1 (MQ=255)                                                                                             aCCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTGGCCGaa                                                          <  2:218249/149‑1 (MQ=255)                                                                                              ccTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTGGCCGAAg                                                         >  5:33176/1‑149 (MQ=255)                                                                                               cTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCa                                                                           <  2:187516/131‑1 (MQ=255)                                                                                               cTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCa                                                                           >  1:187516/1‑131 (MQ=255)                                                                                                tggtggAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGAAGTTCGCCCGTGACGAAGGCCAGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCAGCTGCAGAATCCGCAGATTCC‑CCTGGCCGAAGCg                                                       >  7:322147/1‑149 (MQ=255)                                                                                                   tggAGTCCACGTTGACTGCCGCGCTGGACATCCTCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑TCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTGGCCGAAGCGTTc                                                    <  3:58814/149‑1 (MQ=255)                                                                                                          cACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTGGCCGAAGc                                                        <  1:9091/138‑1 (MQ=255)                                                                                                          cACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTGGCCGAAGc                                                        >  2:9091/1‑138 (MQ=255)                                                                                                          cACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTGGCCGAAGCGTTCCTGCAgg                                             <  7:52866/149‑1 (MQ=255)                                                                                                                gAATTCCGCGCTGGACATTATCGTCCATCATTTCGCCCGTGTCGATGGGCTGTTCTCTAAGCCTGCCTGGCCAACTAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTGGCCGAAGCGTTCCTGCAgg                                             <  1:107906/148‑1 (MQ=255)                                                                                                                gAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTGGCCGAAGCGTTCCTGCAGGTACTgg                                       >  2:152807/1‑149 (MQ=255)                                                                                                                 aaTGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTGGCCGAAGCGTTCCTGCAGGTACTgg                                       <  6:33176/148‑1 (MQ=255)                                                                                                                       gcgcTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTGGCCGAAGCGTTCCTGCAGGTACTGGCTGTGCg                                <  5:20927/149‑1 (MQ=255)                                                                                                                        cgcTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTGGCCGAAGCGTTCCTGCAGGTACTGGCTGTGCGt                               <  1:20951/149‑1 (MQ=255)                                                                                                                         gcTGGACATCATCGACCAGCAGTTCGCCCGGGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCACCCTGGCCGAAGCGTTCCTGCAGGTACTGGCTGTGCGt                               <  1:225746/149‑1 (MQ=255)                                                                                                                               catcatCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTGGCCGAAGCGTTCCTGCAGGTACTGGCTGTGCGTgacgac                         >  1:229377/1‑148 (MQ=255)                                                                                                                                atcatcGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTGGCCGAAGCGTTCCTGCAGGTACTGGCTGTGCGTGacgacg                        >  2:98835/1‑148 (MQ=255)                                                                                                                                 tcatcGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTGGCCGAAGCGTTCCTGCAGGTACTGGCTGTGCGTGACGACGaa                      >  8:274385/1‑149 (MQ=255)                                                                                                                                   atcGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTGGCCGAAGCGTTCCTGCAGGTACTGGCTGTGCGTGACGACGAACa                    >  8:228468/1‑149 (MQ=255)                                                                                                                                   atcGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTGGCCGAAGCGTTCCTGCAGGTACTGGCTGTGCGTGACGACGAACa                    >  3:141556/1‑149 (MQ=255)                                                                                                                                        ccAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTGGCCGAAGCGTTCCTGCAGGTACTGGCTGTGCGTGACGACGAACATGTcc               >  3:17606/1‑149 (MQ=255)                                                                                                                                         cagcagTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTGGCCGAAGCGTTCCTGCAGGTACTGGCTGTGCGTGACGACGAACagtga                >  1:123396/1‑143 (MQ=255)                                                                                                                                          agcagTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTGGCCGAAGCGTTCCTGCAGGTACTGGCTGTGCGTGACGACGAACATGTCCGc             <  4:141556/149‑1 (MQ=255)                                                                                                                                               ttCGCCCaggcaggcttcgtacaggccatcgtcacgggcgaactgctggtcgatgatgtccagcgcggcattcaacgtggactccaccaggttttcgcgcactttgccccagtagtgcgcgcaggcgaacacgatgaaggcgtgggta               >  7:280698‑M1/1‑7 (MQ=255)                                                                                                                                               ttCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTgggcgaactgctggtcgatgatgtccagcgcggcattcaacgtggactccaccaggttttcgcgcactttgccccagtagtgcgcgcaggcgaacacgatgaaggcgtgggta             <  5:154179‑M2/148‑114 (MQ=255)                                                                                                                                                  gCCCaggcaggcttcgtacaggccatcgtcacgggcgaactgctggtcgatgatgtccagcgcggcattcaacgtggactccaccaggttttcgcgcactttgccccagtagtgcgcgcaggcgaacacgatgaaggcgtgggtata             >  5:90705‑M1/1‑4 (MQ=255)                                                                                                                                                  gCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTGGCCGAAGCGTTc                                                    <  4:69452/102‑1 (MQ=255)                                                                                                                                                  gCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTGGCCGAAGCGTTc                                                    >  3:69452/1‑102 (MQ=255)                                                                                                                                                   cccaggcaggcttcgtacaggccatcgtcacgggcgaactgctggtcgatgatgtccagcgcggcattcaacgtggactccaccaggttttcgcgcactttgccccagtagtgcgcgcaggcgaacacgatgaaggcgtgggtatacag          >  1:55525‑M1/1‑3 (MQ=255)                                                                                                                                                   cccGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTgggcgaactgctggtcgatgatgtccagcgcggcattcaacgtggactccaccaggttttcgcgcactttgccccagtagtgcgcgcaggcgaacacgatgaaggcgtgg                <  6:351709‑M2/141‑111 (MQ=255)                                                                                                                                                   cccGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTgggcgaactgctggtcgatgatgtccagcgcggcattcaacgtggactccaccaggttttcgcgcactttgccccagtagtgcgcgcaggcgaacacgatgaaggcgtgg                >  5:351709‑M2/1‑31 (MQ=255)                                                                                                                                                    ccGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTg                                                                                      >  6:236564/1‑67 (MQ=255)                                                                                                                                                    ccGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTg                                                                                      <  5:236564/67‑1 (MQ=255)                                                                                                                                                     cGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTGGCCGAAGCGTTCCTGCAGGTACTGGCTGTGCGTGACGACGAACATGTCCGCCAGTCgctgct  >  8:170014/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                           CCAAGGCAAGCCGCTGGACCGGCGCAAGGACCTGTATACCCACGCCTTCATCGTGTTCGCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTGGCCGAAGCGTTCCTGCAGGTACTGGCTGTGCGTGACGACGAACATGTCCGCCAGTCGCTGCT  >  NC_002947/5526832‑5527128

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.