New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5526980	49 (0.910)	3 (0.060)	3/246	NT	5.5%	coding (493/1134 nt)	PP_4860	mannose‑6‑phosphate isomerase
	?	NC_002947	= 5527008	56 (1.090)					coding (521/1134 nt)	PP_4860	mannose‑6‑phosphate isomerase

CTGTATACCCACGCCTTCATCGTGTTCGCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTGGCCGAAGCGTTCCT‑‑GCAGGTACTGGCTGTGCGTGACGACGAACATGTCCGCCAGTCGCTGCTGCAATTGTGTCAGGCACTCGAGGCG  >  NC_002947/5526863‑5527153                                                                                                                                                    |                                                                                                                                                        cTGTATACCCACGCCTTCATCGTGTTCGCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTggg                                                                                                                                                      >  1:55525‑M2/1‑146 (MQ=255)    tataCCCACGCCTTCATCGTGTTCGCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTgggc                                                                                                                                                     >  5:90705‑M2/1‑143 (MQ=255)      taCCCACGCCTTCATCGTGTTCGCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTgggcgaa                                                                                                                                                  >  7:280698‑M2/1‑141 (MQ=255)         ccACGCCTTCATCGTGTTCGCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACt                                                                                                                                           >  4:257974/1‑149 (MQ=255)          cACGCCTTCATCGTGTTCGCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATCGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTg                                                                                                                                          <  5:102970/149‑1 (MQ=255)               cTTCATCGTGTTCGCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGcc                                                                                                                                      >  1:230518/1‑148 (MQ=255)                ttCATCGTGTTCGCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGa                                                                                                                                    >  2:158595/1‑149 (MQ=255)                 tCATCGTGTTCGCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGGTGGGGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGAc                                                                                                                                   >  2:315287/1‑149 (MQ=255)                       tgtTCGCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCgg                                                                                                                              >  1:333707/1‑148 (MQ=255)                            gCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAgcctgcct                                                                                                                                                         >  7:124523/1‑119 (MQ=255)                            gCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAgcctgcct                                                                                                                                                         <  8:124523/119‑1 (MQ=255)                            gCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACCATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTgg                                                                                                                        >  4:34534/1‑149 (MQ=255)                             ccTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGc                                                                                                                       <  2:230518/149‑1 (MQ=255)                                    gcACTACTGGGGCAAAGTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTg                                                                                                                 >  2:20951/1‑148 (MQ=255)                                        tactGGGGCAAAGTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCa                                                                                                               >  1:342576/1‑146 (MQ=255)                                        tactGGGGCAAAGTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCa                                                                                                               <  2:342576/146‑1 (MQ=255)                                             gggCAAAGTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCg                                                                                                        >  2:107906/1‑148 (MQ=255)                                             gggCAAAGTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCg                                                                                                        >  8:52866/1‑148 (MQ=255)                                                   aGTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGc                                                                                                 <  3:257974/149‑1 (MQ=255)                                                    gTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCa                                                                                                <  1:158595/149‑1 (MQ=255)                                                    gTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCa                                                                                                >  4:21127/1‑149 (MQ=255)                                                         cgAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTgg                                                                                          <  2:333707/149‑1 (MQ=255)                                                         cgAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTgg                                                                                          <  3:34534/149‑1 (MQ=255)                                                              aCCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTGGCCGaa                                                                                     <  2:218249/149‑1 (MQ=255)                                                               ccTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTGGCCGAAg                                                                                    >  5:33176/1‑149 (MQ=255)                                                                cTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCa                                                                                                      <  2:187516/131‑1 (MQ=255)                                                                cTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCa                                                                                                      >  1:187516/1‑131 (MQ=255)                                                                 tggtggAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGAAGTTCGCCCGTGACGAAGGCCAGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCAGCTGCAGAATCCGCAGATTCC‑CCTGGCCGAAGCg                                                                                  >  7:322147/1‑149 (MQ=255)                                                                    tggAGTCCACGTTGACTGCCGCGCTGGACATCCTCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑TCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTGGCCGAAGCGTTc                                                                               <  3:58814/149‑1 (MQ=255)                                                                           cACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTGGCCGAAGc                                                                                   <  1:9091/138‑1 (MQ=255)                                                                           cACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTGGCCGAAGc                                                                                   >  2:9091/1‑138 (MQ=255)                                                                           cACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTGGCCGAAGCGTTCCT‑‑GCAgg                                                                      <  7:52866/149‑1 (MQ=255)                                                                                 gAATTCCGCGCTGGACATTATCGTCCATCATTTCGCCCGTGTCGATGGGCTGTTCTCTAAGCCTGCCTGGCCAACTAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTGGCCGAAGCGTTCCT‑‑GCAgg                                                                      <  1:107906/148‑1 (MQ=255)                                                                                 gAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTGGCCGAAGCGTTCCT‑‑GCAGGTACTgg                                                                >  2:152807/1‑149 (MQ=255)                                                                                  aaTGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTGGCCGAAGCGTTCCT‑‑GCAGGTACTgg                                                                <  6:33176/148‑1 (MQ=255)                                                                                        gcgcTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTGGCCGAAGCGTTCCT‑‑GCAGGTACTGGCTGTGCg                                                         <  5:20927/149‑1 (MQ=255)                                                                                         cgcTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTGGCCGAAGCGTTCCT‑‑GCAGGTACTGGCTGTGCGt                                                        <  1:20951/149‑1 (MQ=255)                                                                                          gcTGGACATCATCGACCAGCAGTTCGCCCGGGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCACCCTGGCCGAAGCGTTCCT‑‑GCAGGTACTGGCTGTGCGt                                                        <  1:225746/149‑1 (MQ=255)                                                                                                catcatCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTGGCCGAAGCGTTCCT‑‑GCAGGTACTGGCTGTGCGTgacgac                                                  >  1:229377/1‑148 (MQ=255)                                                                                                 atcatcGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTGGCCGAAGCGTTCCT‑‑GCAGGTACTGGCTGTGCGTGacgacg                                                 >  2:98835/1‑148 (MQ=255)                                                                                                  tcatcGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTGGCCGAAGCGTTCCT‑‑GCAGGTACTGGCTGTGCGTGACGACGaa                                               >  8:274385/1‑149 (MQ=255)                                                                                                    atcGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTGGCCGAAGCGTTCCT‑‑GCAGGTACTGGCTGTGCGTGACGACGAACa                                             >  3:141556/1‑149 (MQ=255)                                                                                                    atcGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTGGCCGAAGCGTTCCT‑‑GCAGGTACTGGCTGTGCGTGACGACGAACa                                             >  8:228468/1‑149 (MQ=255)                                                                                                         ccAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTGGCCGAAGCGTTCCT‑‑GCAGGTACTGGCTGTGCGTGACGACGAACATGTcc                                        >  3:17606/1‑149 (MQ=255)                                                                                                          cagcagTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTGGCCGAAGCGTTCCT‑‑GCAGGTACTGGCTGTGCGTGACGACGAACagtga                                         >  1:123396/1‑143 (MQ=255)                                                                                                           agcagTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTGGCCGAAGCGTTCCT‑‑GCAGGTACTGGCTGTGCGTGACGACGAACATGTCCGc                                      <  4:141556/149‑1 (MQ=255)                                                                                                                ttCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTgggcgaactgctggtcgatgatgtccagcgcggcattcaacgtggactccaccaggttttcgcgcactttgccccagtagtgcgcgcaggcgaacacgatgaaggcgtgggta                                        <  5:154179‑M2/148‑114 (MQ=255)                                                                                                                   gCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTGGCCGAAGCGTTc                                                                               <  4:69452/102‑1 (MQ=255)                                                                                                                   gCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTGGCCGAAGCGTTc                                                                               >  3:69452/1‑102 (MQ=255)                                                                                                                    cccGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTgggcgaactgctggtcgatgatgtccagcgcggcattcaacgtggactccaccaggttttcgcgcactttgccccagtagtgcgcgcaggcgaacacgatgaaggcgtgg                                           >  5:351709‑M2/1‑31 (MQ=255)                                                                                                                    cccGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTgggcgaactgctggtcgatgatgtccagcgcggcattcaacgtggactccaccaggttttcgcgcactttgccccagtagtgcgcgcaggcgaacacgatgaaggcgtgg                                           <  6:351709‑M2/141‑111 (MQ=255)                                                                                                                     ccGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTg                                                                                                                 <  5:236564/67‑1 (MQ=255)                                                                                                                     ccGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTg                                                                                                                 >  6:236564/1‑67 (MQ=255)                                                                                                                      cGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTGGCCGAAGCGTTCCT‑‑GCAGGTACTGGCTGTGCGTGACGACGAACATGTCCGCCAGTCgctgct                           >  8:170014/1‑149 (MQ=255)                                                                                                                       gTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTGGCCGAAGCGTTCCT‑‑GCAGGTACTGGCTGTGCGTGACGACGAACATGTCCGCCAGTCGctgctg                          >  5:299959/1‑149 (MQ=255)                                                                                                                       gTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTGGCCGAAGCGTTCCT‑‑GCAGGTACTGGCTGTGCGTGACGACGAACATGTCCGCCAGTCGctgctg                          <  1:315287/149‑1 (MQ=255)                                                                                                                            gATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTGGCCGAAGCGTTCCT‑‑GCAGGTACTGGCTGTGCGTGACGACGAACATGTCCGCCAGTCGCTGCTGCAAtt                     <  1:129572/149‑1 (MQ=255)                                                                                                                              tGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTGGCCGAAGCGTTCCT‑‑GCAGGTACTGGCTGTGCGTGACGACGAACATGTCCGCCAGTCGCTGCTGCAATtgt                   <  7:170014/149‑1 (MQ=255)                                                                                                                                  cTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTGGCCGAAGCGTTCCT‑‑GCAGGTACTGGCTGTGCGTGACGACGAACATGTCCGCCAGTCGCTGCTGCAATTgtgt                 >  2:125291/1‑147 (MQ=255)                                                                                                                                  cTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTGGCCGAAGCGTTCCT‑‑GCAGGTACTGGCTGTGCGTGACGACGAACATGTCCGCCAGTCGCTGCTGCAATTgtgt                 >  1:148680/1‑147 (MQ=255)                                                                                                                                  cTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTGGCCGAAGCGTTCCT‑‑GCAGGTACTGGCTGTGCGTGACGACGAACATGTCCGCCAGTCGCTGCTGCAATTGTGTCa               <  2:229377/149‑1 (MQ=255)                                                                                                                                     t‑‑ACGAATCCTGCCTGG‑‑‑GGGAATTCTGGGGCGAACTCGGGAGTGGGCCGCTGCACAATCCGCACATTCA‑CCTGGCCGAATCGGTCCTTCTCAGGTACTGGCTGTGCGTGACGACGAACATGTCCGCCAGTCGCTGCTGCAATTGTGTCAg              <  1:98835/149‑1 (MQ=255)                                                                                                                                     t‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTGGCCGAAGCGTTCCT‑‑GCAGGTACTGGCTGTGCGTGACGACGAACATGTCCGCCAGTCGCTGCTGCAATTGTGTCAg              <  6:299959/147‑1 (MQ=255)                                                                                                                                        aCGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTGGCCGAAGCGTTCCT‑‑GCAGGTACTGGCTGTGCGTGACGACGAACATGTCCGCCAGTCGCTGCTGCAATTGTGTCAGGCa           >  5:38682/1‑149 (MQ=255)                                                                                                                                          gAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTGGCCGAAGCGTTCCT‑‑GCAGGTACTGGCTGTGCGTGACGACGAACATGTCCGCCAGTCGCTGCTGCAATTGTGTCAGGCACt         >  7:17517/1‑149 (MQ=255)                                                                                                                                              cctgcctgG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTGGCCGAAGCGTTCCT‑‑GCAGGTACTGGCTGTGCGTGACGACGAACATGTCCGCCAGTCGCTGCTGCAATTGTGTCAGGCACTCGAg     <  3:21127/149‑1 (MQ=255)                                                                                                                                                 gcctgG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTGGCCGAAGCGTTCCT‑‑GCAGGTACTGGCTGTGCGTGACGACGAACATGTCCGCCAGTCGCTGCTGCAATTGTGTCAGGCACTCGAGgcg  >  2:203643/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                        CTGTATACCCACGCCTTCATCGTGTTCGCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGT‑‑ACGAAGCCTGCCTGG‑‑‑GCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCA‑CCTGGCCGAAGCGTTCCT‑‑GCAGGTACTGGCTGTGCGTGACGACGAACATGTCCGCCAGTCGCTGCTGCAATTGTGTCAGGCACTCGAGGCG  >  NC_002947/5526863‑5527153

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.