New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5556288 =	56 (1.040)	3 (0.060)	3/246	NT	5.8%	coding (1342/1935 nt)	PP_4888	methyl‑accepting chemotaxis transducer
	?	NC_002947	5556335 =	44 (0.860)					coding (1295/1935 nt)	PP_4888	methyl‑accepting chemotaxis transducer

TGCAGCGTTGAGGGCCAGCAGATTGGTCTGCTCGGCAATGCCATGGATGACAGTCAGCACCACTTCAATCTGTTCGCTCTGCTTGGCCAGGCGCTCGATCACCTGAGAGCCCGTTTCAACCTGCCCGGCAAGGTTCTCAATCAGGCTCGCCAGTTGCGTCGAGGAACGGCTGTTCTCATCCGTCGCCTGGCGAATGTCCACCACCTGCTGCAACGCCGCCTGCATGGCATGGCTTTCAGCCTGAGCCTCGTCAGCCATGCTCGACAGGTCGCGCAGGCTGGCGGCCACTT  >  NC_002947/5556142‑5556431                                                                                                                                                   |                                                                                                                                                gcccagcgcaatgccggtgccgatgccggggcggcgttgcagcgtgacgaagtggccgccagcctgcgcgacctgtcgagcatggctgacgaggctcaggctgaaagccatgccatgcaggcggcgttgcagcaggtggtggacatTCg                                                                                                                                               <  1:20045‑M1/3‑1 (MQ=255) gcccagcgcaatgccggtgccgatgccgcggcggcgttgcagcgtgacgaagtggccgccagcctgcgcgacctgtcgagcatggctgacgaggctcaggctgaaagccatgccatgcaggcggcgttgcagcaggtggtggacatTc                                                                                                                                                >  1:5949‑M1/147‑148 (MQ=255)       gTTGAGGGCCAGCAGATTGGTCTGCTCGGCAATGCCATGGATGACAGTCAGCACCACTTCAATCTGTTCGCTCTGCTTGGCCAGGCGCTCGATCACCTGAGAGCCCGTTTCAACCTGCCCGGCAAGGTTCTCAATCAGGCTCGCCAGtt                                                                                                                                         <  5:66917/149‑1 (MQ=255)       gTTGAGGGCCAGCAGATTGGTCTGCTCGGCAATGCCATGGATGACAGTCAGCACCACTTCAATCTGTTCGCTCTGCTTGGCCAGGCGCTCGATCACCTGAGAGCCCGTTTCAACCTGCCCGGCAAGGTTCTCAATCAGGCTCGCCAGtt                                                                                                                                         <  1:37674/149‑1 (MQ=255)            gggCCAGCAGATTGGTCTGCTCGGCAATGCCATGGATGACAGTCAGCACCACTTCAATCTGTTCGCTCTGCTTGGCCAGGCGCTCGATCACCTGAGAGCCCGTTTCAACCTGCCCGGCAAGGTTCTCAATCAGGCTCGCCAGTTGCGTc                                                                                                                                    <  3:223965/149‑1 (MQ=255)            gggCCAGCAGAATGGTCTGCTCGGCAATGCCATGGATGACAGTCAGCACCACTTCAATCTGTTCGCTCTGCTTGGCCAGGCGCTCGATCACCTGAGAGCCCGTTTCAACCTGCCCGGCAAGGTTCTCAATCAGGCTCGCCAGTTGCGTc                                                                                                                                    >  6:262334/1‑149 (MQ=255)             ggCCAGCAGATTGGTCTGCTCGGCAATGCCATGGATGACAGTCAGCACCACTTCAATCTGTTCGCTCTGCTTGGCCAGGCGCTCGATCACCTGAGAGCCCGTTTCAACCTGCCCGGCAAGGTTCTCAATCAGGCTCGCCAGTTGCGTCg                                                                                                                                   <  3:268603/149‑1 (MQ=255)               ccAGCAGATTGGTCTGCTCGGCAATGCCATGGATGACAGTCAGCACCACTTCAATCTGTTCGCTCTGCTTGGCCAGGCGCTCGATCACCTGAGAGCCCGTTTCAACCTGCCCGGCAAGGTTCTCAATCAGGCTCGCCAGTTGCGTCGAg                                                                                                                                 <  4:105053/149‑1 (MQ=255)                cagcagATTGGTCTGCTCGGCAATGCCATGGATGACAGTCAGCACCACTTCAATCTGTTCGCTCTGCTTGGCCAGGCGCTCGATCACCTGAGAGCCCGTTTCAACCTGCCCGGCAAGGTTCTCAATCAGGCTCGCCAGTTGCGTCGAg                                                                                                                                 >  4:83783/1‑148 (MQ=255)                cagcagATTGGTCTGCTCGGCAATGCCATGGATGACAGTCAGCACCACTTCAATCTGTTCGCTCTGCTTGGCCAGGCGCTCGATCACCTGAGAGCCCGTTTCAACCTGCCCGGCAAGGTTCTCAATCAGGCTCGCCAGTTGCGTCGAg                                                                                                                                 >  6:252980/1‑148 (MQ=255)                cagcagATTGGTCTGCTCGGCAATGCCATGGATGACAGTCAGCACCACTTCAATCTGTTCGCTCTGCTTGGCCAGGCGCTCGATCACCTGAGAGCCCGTTTCAACCTGCCCGGCAAGGTTCTCAATCAGGCTCGCCAGTTGCGTCGAg                                                                                                                                 <  3:83783/148‑1 (MQ=255)                 gtgccgatgccgcggcggcgttgcagcgtgacgaagtggccgccagcctgcgcgacctgtcgagcatggctgacgaggctcaggctgaaagccatgccatgcaggcggcgttgcagcaggtggtggacatt                                                                                                                                                 <  8:305182‑M1/1‑1 (MQ=255)                 gtgccgatgccgcggcggcgttgcagcgtgacgaagtggccgccagcctgcgcgacctgtcgagcatggctgacgaggctcaggctgaaagccatgccatgcaggcggcgttgcagcaggtggtggacatt                                                                                                                                                 >  7:305182‑M1/131‑131 (MQ=255)                     gATTGGTCTGCTCGGCAATGCCATGGATGACAGTCAGCACCACTTCAATCTGTTCGCTCTGCTTGGCCAGGCGCTCGATCACCTGAGAGCCCGTTTCAACCTGCCCGGCAAGGTTCTCAATCAGGCTCGCCAGTTGCGTCGAGGAACgg                                                                                                                           <  1:224743/149‑1 (MQ=255)                         ggTCTGCTCGGCAATGCCATGGATGACAGTCAGCACCACTTCAATCTGTTCGCTCTGCTTGGCCAGGCGCTCGATCACCTGAGAGCCCGTTTCAACCTGCCCGGCAAGGTTCTCAATCAGGCTCGCCAGTTGCGTCGAGGAACGGCTg                                                                                                                        <  5:262334/148‑1 (MQ=255)                            cTGCTCGGCAATGCCATGGATGACAGTCAGCACCACTTCAATCTGTTCGCTCTGCTTGGCCAGGCGCTCGATCACCTGAGAGCCCGTTTCAACCTGCCCGGCAAGGTTCTCAATCAGGCTCGCCAGTTGCGTCGAGGAACGGCTGTtct                                                                                                                    <  2:119104/149‑1 (MQ=255)                              gCTCGGCAATGCCATGGATGACAGTCAGCACCACTTCAATCTGTTCGCTCTGCTTGGCCAGGCGCTCGATCACCTGAGAGCCCGTTTCAACCTGCCCGGCAAGGTTCTCAATCAGGCTCGCCAGTTGCGTc                                                                                                                                    <  2:265618/131‑1 (MQ=255)                              gCTCGGCAATGCCATGGATGACAGTCAGCACCACTTCAATCTGTTCGCTCTGCTTGGCCAGGCGCTCGATCACCTGAGAGCCCGTTTCAACCTGCCCGGCAAGGTTCTCAATCAGGCTCGCCAGTTGCGTc                                                                                                                                    >  1:265618/1‑131 (MQ=255)                               cTCGGCAATGCCATGGATGACAGTCAGCACCACTTCAATCTGTTCGCTCTGCTTGGCCAGGCGCTCGATCACCTGAGAGCCCGTTTCAACCTGCCCGGCAAGGTTCTCAATCAGGCTCGCCAGTTGCGTCGAGGAACGGCTGTTCTCAt                                                                                                                 <  1:204037/149‑1 (MQ=255)                               cTCGGCAATGCCATGGATGACAGTCAGCACCACTTCAATCTGTTCGCTCTGCTTGGCCAGGCGCTCGATCACCTGAGAGCCCGTTTCAACCTGCCCGGCAAGGTTCTCAATCAGGCTCGCCAGTTGCGTCGAGGAACGGCTGTTCTCAt                                                                                                                 <  3:153092/149‑1 (MQ=255)                                  ggCAATGCCATGGATGACAGTCAGCACCACTTCAATCTGTTCGCTCTGCTTGGCCAGGCGCTCGATCACCTGAGAGCCCGTTTCAACCTGCCCGGCAAGGTTCTCAATCAGGCTCGCCAGTTGCGTCGAGGAACGGCTGTTCTCATCCg                                                                                                              >  8:149088/1‑149 (MQ=255)                                         ccATGGATGACAGTCAGCACCACTTCAATCTGTTCGCTCTGCTTGGCCAGGCGCTCGATCACCTGAGAGCCCGTTTCAACCTGCCCGGCAAGGTTCTCAATCAGGCTCGCCAGTTGCGTCGAGGAACGGCTGTTCTCATCCGTCGCCt                                                                                                        <  7:149088/148‑1 (MQ=255)                                           aTGGATGACAGTCAGCACCACTTCAATCTGTTCGCTCTGCTTGGCCAGGCGCTCGATCACCTGAGAGCCCGTTTCAACCTGCCCGGCAAGGTTCTCAATCAGGCTCGCCAGTTGCGTCGAGGAACGGCTGTTCTCATCCGTCGCCTGGc                                                                                                     >  5:164426/1‑149 (MQ=255)                                           aTGGATGACAGTCAGCACCACTTCAATCTGTTCGCTCTGCTTGGCCAGGCGCTCGATCACCTGAGAGCCCGTTTCAACCTGCCCGGCAAGGTTCTCAATCAGGCTCGCCAGTTGCGTCGAGGAACGGCTGTTCTCATCCGTCGCCTGGc                                                                                                     >  5:256762/1‑149 (MQ=255)                                               acgaagtggccgccagcctgcgcgacctgtcgagcatggctgacgaggctcaggctgaaagccatgccatgcaggcggcgttgcagcaggtggtggacatTCGCCAGTTGCGTCGAGGAACGGCTGTTCTCATCCGTCGCCTGGCGAAt                                                                                                 >  4:16940‑M1/101‑149 (MQ=255)                                                 gACAGTCAGCACCACTTCAATCTGTTCGCTCTGCTTGGCCAGGCGCTCGATCACCTGAGAGCCCGTTTCAACCTGCCCGGCAAGGTTCTCAATCAGGCTCGCCAGTTGCGTCGAGGAACGGCTGTTCTCATCCGTCGCCTGGCGAATGt                                                                                               >  1:294553/1‑149 (MQ=255)                                                   cAGTCAGCACCACTTCAATCTGTTCGCTCTGCTTGGCCAGGCGCTCGATCACCTGAGAGCCCGTTTCAACCTGCCCGGCAAGGTTCTCAATCAGGCTCGCCAGTTGCGTCGAGGAACGGCTGTTCTCATCCGTCGCCTGGCGAATGTcc                                                                                             <  4:115520/149‑1 (MQ=255)                                                    aGTCAGCACCACTTCAATCTGTTCGCTCTGCTTGGCCAGGCGCTCGATCACCTGAGAGCCCGTTTCAACCTGCCCGGCAAGGTTCTCAATCAGGCTCGCCAGTTGCGTCGAGGAACGGCTGTTCTCATCCGTCGCCTGGCGAATGTcca                                                                                            >  3:297102/1‑149 (MQ=255)                                                            ccacTTCAATCTGTTCGCTCTGCTTGGCCAGGCGCTCGATCACCTGAGAGCCCGTTTCAACCTGCCCGGCAAGGTTCTCAATCAGGCTCGCCAGTTGCGTCGAGGAACGGCTGTTCTCATCCGTCGCCTGGCGAATGTCCACCACctgc                                                                                    >  2:212473/1‑149 (MQ=255)                                                               cTTCAATCTGTTCGCTCTGCTTGGCCAGGCGCTCGATCACCTGAGAGCCCGTTTCAACCTGCCCGGCAAGGTTCTCAATCAGGCTCGCCAGTTGCGTCGAGGAACGGCTGTtc                                                                                                                     <  6:75978/113‑1 (MQ=255)                                                               cTTCAATCTGTTCGCTCTGCTTGGCCAGGCGCTCGATCACCTGAGAGCCCGTTTCAACCTGCCCGGCAAGGTTCTCAATCAGGCTCGCCAGTTGCGTCGAGGAACGGCTGTtc                                                                                                                     >  5:75978/1‑113 (MQ=255)                                                                ctgcgcgacctgtcgagcatggctgacgaggctcaggctgaaagccatgccatgcaggcggcgttgcagcaggtggtggacatTCGCCAGTTGCGTCGAGGAACGGCTGTTCTCATCCGTCGCCTGGCGAATGt                                                                                               <  7:14068‑M1/51‑1 (MQ=255)                                                                ctgcgcgacctgtcgagcatggctgacgaggctcaggctgaaagccatgccatgcaggcggcgttgcagcaggtggtggacatTCGCCAGTTGCGTCGAGGAACGGCTGTTCTCATCCGTCGCCTGGCGAATGt                                                                                               >  8:14068‑M1/84‑134 (MQ=255)                                                                    aTCTGTTCGCTCTGCTTGGCCAGGCGCTCGATCACCTGAGAGCCCGTTTCAACCTGCCCGGCAAGGTTCTCAATCAGGCTCGCCAGTTGCGTCGAGGAACGGCTGTTCTCATCCGTCGCCTGGCGAATGTCCACCACCTGCTGCAAcgc                                                                            <  2:294553/149‑1 (MQ=255)                                                                             ctctGCTTGGCCAGGCGCTCGATCACCTGAGAGCCCGTTTCAACCTGCCCGGCAAGGTTCTCAGTCAGGCTCGCCAGTTGCGTCGAGGAACGGCTGTTCTCATCCGTCGCCTGGCGAATGTCCAGCACCTGCTGCAACGCCGCCTgcct                                                                   >  8:95545/1‑147 (MQ=255)                                                                              tctGCTTGGCCAGGCGCTCGATCACCTGAGAGCCCGTTTCAACCTGCCCGGCAAGGTTCTCAATCAGGCTCGCCAGTTGCGTCGAg                                                                                                                                 <  5:329384/86‑1 (MQ=255)                                                                              tctGCTTGGCCAGGCGCTCGATCACCTGAGAGCCCGTTTCAACCTGCCCGGCAAGGTTCTCAATCAGGCTCGCCAGTTGCGTCGAg                                                                                                                                 >  6:329384/1‑86 (MQ=255)                                                                                 gCTTGGCCAGGCGCTCGATCACCTGAGAGCCCGTTTCAACCTGCCCGGCAAGGTTCTCAATCAGGCTCGCCAGTTGCGTCGAGGAACGGCTGTTCTCATCCGTCGCCTGGCGAATGTCCACCACCTGCTGCAACGCCGCCTgcatggca                                                               >  5:185121/1‑149 (MQ=255)                                                                                  cTTGGCCAGGCGCTCGATCACCTGAGAGCCCGTTTCAACCTGCCCGGCAAGGTTCTCAATCAGGCTCGCCAGTTGCGTCGAGGAACGGCTGTTCTCATCCGTCGCCTGGCGAATGTCCACCACCTGCTGCAACGCCGCCTgcatggca                                                               <  5:252980/148‑1 (MQ=255)                                                                                        cAGGCGCTCGATCACCTGAGAGCTCGTTTCAACCTGCCCGGCAAGGTTCTCAATCAGGCTCGCCAGTTGCGTCGAGGAACGGCTGTTCTCATCCGTCGCCTGGCGAATGTCCACCACCTGCTGCAACGCCGCCTGCATGGCATGGCttt                                                        >  8:32883/1‑149 (MQ=255)                                                                                          ggCGCTCGATCACCTGAGAGCCCGTTTCAACCTGCCCGGCAAGGTTCTCAATCAGGCTCGCCAGTTGCGTCGAGGAACGGCTGTTCTCATCCGTCGCCTGGCGAATGTCCACCACCTGCTGCAACGCCGCCTGCATGGCATGGCTTTCa                                                      <  6:126103/149‑1 (MQ=255)                                                                                           gcgcTCGATCACCTGAGAGCCCGTTTCAACCTGCCCGGCAAGGTTCTCAATCAGGCTCGCCAGTTGCGAAAAGGAACGGCTGTTCTCATCCGTCGCCTGGCGAATGTCCACCACCTGCTGCAACGCCGCCTGCATGGCATGGCTTTCAg                                                     >  1:108056/1‑149 (MQ=255)                                                                                                       cTGAGAGCCCGTTTCAACCTGCCCGGCAAGGTTCTCAATCAGGCTCGCCAGTTGCGTCGAGGAACGGCTGTTCTCATCCGTCGCCTGGCGAATGTCCACCACctgct                                                                                   >  1:228468/1‑107 (MQ=255)                                                                                                       cTGAGAGCCCGTTTCAACCTGCCCGGCAAGGTTCTCAATCAGGCTCGCCAGTTGCGTCGAGGAACGGCTGTTCTCATCCGTCGCCTGGCGAATGTCCACCACctgct                                                                                   <  2:228468/107‑1 (MQ=255)                                                                                                       cTGAGAGCCCGTTTCAACCTGCCCGGCAAGGTTCTCAATCAGGCTCGCCAGTTGCGTCGAGGAACGGCTGTTCTCATCCGTCGCCTGGCGAATGTCCACCACCTGCTGCAACGCCGCCTGCATGGCATGGCTTTCAGCCTGAGCCTCGt                                         >  7:325068/1‑149 (MQ=255)                                                                                                       cTGAGAGCCCGTTTCAACCTGCCCGGCAAGGTTCTCAATCAGGCTCGCCAGTTGCGTCGAGGAACGGCTGTTCTCATCCGTCGCCTGGCGAATGTCCACCACCTGCTGCAACGCCGCCTGCATGGCATGGCTTTCAGCCTGAGCCTCGt                                         >  3:55752/1‑149 (MQ=255)                                                                                                          agagCCCGTTTCAACCTGCCCGGCAAGGTTCTCAATCAGGCTCGCCAGTTGCGTCGAGGAACGGCTGTTCTCATCCGTCGCCTGGCGAATGTCCACCACCTGCTGCAACGCCGCCTGCATGGCATGGCTTTCAGCCTGAGCCTCGTCa                                       <  6:256762/148‑1 (MQ=255)                                                                                                          agagCCCGTTTCAACCTGCCCGGCAAGGTTCTCAATCAGGCTCGCCAGTTGCGTCGAGGAACGGCTGTTCTCATCCGTCGCCTGGCGAATGTCCACCACCTGCTGCAACGCCGCCTGCATGGCATGGCTTTCAGCCTGAGCCTCGTCAg                                      <  6:164426/149‑1 (MQ=255)                                                                                                            agCCCGTTTCAACCTGCCCGGCAAGGTTCTCAATCAGGCTCGCCAGTTGCGTCGAGGAACGGCTGTTCTCATCCGTCGCCTGGCGAATGTCCACCACCTGCTGCAACGCCGCCTGCATGGCATGGCTTTCAGCCTGAGCCTCGTCAGcc                                    <  8:325068/149‑1 (MQ=255)                                                                                                              cccGTTTCAACCTGCCCGGCAAGGTTCTCAATCAGGCTCGCCAGTTGCGTCGAGGAACGGCTGTTCTCATCCGTCGCCTGGCGAATGTCCACCACCTGCTGCAACGCCGCCTGCATGGCATGGCTTTCAGCCTGAGCCTCGTCAGCCAt                                  >  1:253023/1‑149 (MQ=255)                                                                                                                   ttCAACCTGCCCGGCAAGGTTCTCAATCAGGCTCGCCAGTTGCGTCGAGGAACGGCTGTTCTCATCCGTCGCCTGGCGAATGTCCACCACCTGCTGCAACGCCGCCTGCATGGCATGGCTTTCAGCCTGAGCCTCGTCAGCCATGCTc                              >  8:184578/1‑148 (MQ=255)                                                                                                                      aaCCTGCCCGGCAAGGTTCTCAATCAGGCTCGCCAGTTGCGTCGAGGAACGGCTGTTCTCATCCGTCGCCTGGCGAATGTCCACCACCTGCTGCAACGCCGCCTGCATGGCATGGCTTTCAGCCTGAGCCTCGTCAGCCATGCTCGAc                           <  6:185121/148‑1 (MQ=255)                                                                                                                       aCCTGCCCGGCAAGGTTCTCAATCAGGCTCGCCAGTTGCGTCGAGGAACGGCTGTTCTCATCCGTCGCCTGGCGAATGTCCACCACCTGCTGCAACGCCGCCTGCATGGCATGGCTTTCAGCCTGAGCCTCGTCAGCCATGCTCGACAg                         <  4:297102/149‑1 (MQ=255)                                                                                                                       aCCTGCCCGGCAAGGTTCTCAATCAGGCTCGCCAGTTGCGTCGAGGAACGGCTGTTCTCATCCGTCGCCTGGCGAATGTCCACCACCTGCTGCAACGCCGCCTGCATGGCATGGCTTTCAGCCTGAGCCTCGTCAGCCATGCTCGACAg                         >  3:69561/1‑149 (MQ=255)                                                                                                                            cccGGCAAGGTTCTCAATCAGGCTCGCCAGTTGCGTCGAGGAACGGCTGTTCTCATCCGTCGCCTGGCGAATGTCCACCACCTGCTGCAACGCCGCCTGCATGGCATGGCTTTCAGCCTGAGCCTCGTCAGCCATGCTCGACAGGTcgc                    >  3:59828/1‑149 (MQ=255)                                                                                                                             ccGGCAAGGTTCTCAATCAGGCTCGCCAGTTGCGTCGAGGAACGGCTGTTCTCATCCGTCGCCTGGCGAATGTCCACCACCTGCTGCAACGCCGCCTGCATGGCATGGCTTTCAGCCTGAGCCTCGTCAGCCATGCTCGAc                           >  6:171903/1‑141 (MQ=255)                                                                                                                             ccGGCAAGGTTCTCAATCAGGCTCGCCAGTTGCGTCGAGGAACGGCTGTTCTCATCCGTCGCCTGGCGAATGTCCACCACCTGCTGCAACGCCGCCTGCATGGCATGGCTTTCAGCCTGAGCCTCGTCAGCCATGCTCGAc                           <  5:171903/141‑1 (MQ=255)                                                                                                                               ggCAAGGTTCTCAATCAGGCTCGCCAGTTGCGTCGAGGAACGGCTGTTCTCATCCGTCGCCTGGCGAATGTCCACCACCTGCTGCAACGCCGCCTGCATGGCATGGCTTTCAGCCTGAGCCTCGTCAGCCATGCTCGACAGGTcgcg                   >  2:20045/1‑147 (MQ=255)                                                                                                                               ggCAAGGTTCTCAATCAGGCTCGCCAGTTGCGTCGAGGAACGGCTGTTCTCATCCGTCGCCTGGCGAATGTCCACCACCTGCTGCAACACCGCCTGCATGGCATGGCTTTCAGCCTGAGCCTCGTCCGCCATGCTCGACAGGTcgcg                   >  8:49728/1‑147 (MQ=255)                                                                                                                                   aGGTTCTCAATCAGGCTCGCCAGTTGCGTCGAGGAACGGCTGTTCTCATCCGTCGCCTGGCGAATGTCCACCACCTGCTGCAACGCCGCCTGCATGGCATGGCTTTCAGCCTGAGCCTCGTCAGCCATGCTCGACAGGTCGCGCAGGCt             <  2:253023/149‑1 (MQ=255)                                                                                                                                       tctcAATCAGGCTCGCCAGTTGCGTCGAGGAACGGCTGTTCTCATCCGTCGCCTGGCGAATGTCCACCACCTGCTGCAACGCCGCCTGCATGGCATGGCTTTCAGCCTGAGCCTCGTCAGCCATGCTCGACAGGTCGCGCAGGCTggcg         >  5:8352/1‑149 (MQ=255)                                                                                                                                        ctcAATCAGGCTCGCCAGTTGCGTCGAGGAACGGCTGTTCTCATCCGTCGCCTGGCGAATGTCCACCACCTGCTGCAACGCCGCCTGCATGGCATGGCTTTCAGCCTGAGCCTCGTCAGCCATg                                 >  1:63095/1‑124 (MQ=255)                                                                                                                                        ctcAATCAGGCTCGCCAGTTGCGTCGAGGAACGGCTGTTCTCATCCGTCGCCTGGCGAATGTCCACCACCTGCTGCAACGCCGCCTGCATGGCATGGCTTTCAGCCTGAGCCTCGTCAGCCATg                                 <  2:63095/124‑1 (MQ=255)                                                                                                                                               aGGCTCGCCAGTTGCGTCGAGGAACGGCTGTTCTCATCCGTCGCCTGGCGAATGTCCACCACCTGCTGCAACGCCGCCTGCATGGCATGGCTTTCAGCCTGAGCCTCGTCAGCCATGCTCGACAGGTCGCGCAGGCTGGCGGCCACtt  <  4:69561/148‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                TGCAGCGTTGAGGGCCAGCAGATTGGTCTGCTCGGCAATGCCATGGATGACAGTCAGCACCACTTCAATCTGTTCGCTCTGCTTGGCCAGGCGCTCGATCACCTGAGAGCCCGTTTCAACCTGCCCGGCAAGGTTCTCAATCAGGCTCGCCAGTTGCGTCGAGGAACGGCTGTTCTCATCCGTCGCCTGGCGAATGTCCACCACCTGCTGCAACGCCGCCTGCATGGCATGGCTTTCAGCCTGAGCCTCGTCAGCCATGCTCGACAGGTCGCGCAGGCTGGCGGCCACTT  >  NC_002947/5556142‑5556431

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.