New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5581109	51 (0.940)	4 (0.080)	4/248	NT	7.3%	coding (144/1458 nt)	PP_4910	hypothetical protein
	?	NC_002947	= 5581144	53 (1.030)					coding (179/1458 nt)	PP_4910	hypothetical protein

GCTCTGTGAACCGGCCCACGCCAGTCAAACCAGACAATTTCTTCCTGATGATCTATCGCGCCCTGAGTCAACGTCGTGTGCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAACGTGCTACTGGGCAACCTGGT  >  NC_002947/5580961‑5581255                                                                                                                                                     |                                                                                                                                                   gCTCTGTGAACCGGCCCACGCCAGTCAAACCAGACAATTTCTTCCTGATGATCTATCGCGCCCTGAGTCAACGTCGTGTGCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGC                                                                                                                                                    <  1:226369‑M1/149‑1 (MQ=255)    ctGTGAACCGGCCCACGCCAGTCAAACCAGACAATTTCTTCCTGATGATCTATCGCGCCCTGAGTCAACGTCGTGTGCCGATGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGt                                                                                                                                                  >  7:219569/1‑148 (MQ=255)     tgtgAACCGGCCCACGCCAGTCAAACCAGACAATTTCTTCCTGATGATCTATCGCGCCCTGAGTCAACGTCGTGTGCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGa                                                                                                                                                >  7:124410/1‑149 (MQ=255)     tgtgAACCGGCCCACGCCAGTCAAACCAGACAATTTCTTCCTGATGATCTATCGCGCCCTGAGTCAACGTCGTGTGCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGa                                                                                                                                                >  5:101277/1‑149 (MQ=255)       tgAACCGGCCCACGCCAGTCAAACCAGACAATTTCTTCCTGATGATCTATCGCGCCCTGAGTCAACGTCGTGTGCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGAt                                                                                                                                               <  8:219569/148‑1 (MQ=255)        gAACCGGCCCACGCCAGTCAAACCAGACAATTTCTTCCTGATGATCTATCGCGCCCTGAGTCAACGTCGTGTGCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATgg                                                                                                                                             >  2:197211/1‑149 (MQ=255)         aaCCGGCCCACGCCAGTCAAACCAGACAATTTCTTCCTGATGATCTATCGCGCCCTGAGTCAACGTCGTGTGCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATggg                                                                                                                                            >  2:313327/1‑149 (MQ=255)                     ccAGTCAAACCAGACAATTTCTTCCTGATGATCTATCGCGCCCTGAGTCAACGTCGTGTGCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCaa                                                                                                                                <  3:295771/149‑1 (MQ=255)                     ccAGTCAAACCAGACAATTTCTTCCTGATGATCTATCGCGCCCTGAGTCAACGTCGTGTGCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCaa                                                                                                                                <  3:299407/149‑1 (MQ=255)                         tCAAACCAGACAATTTCTTCCTGATGATCTATCGCGCCCTGAGTCAACGTCGTGTGCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAg                                                                                                                            >  4:284469/1‑149 (MQ=255)                         tCAAACCAGACAATTTCTTCCTGATGATCTATCGCGCCCTGAGTCAACGTCGTGTGCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAg                                                                                                                            >  8:168434/1‑149 (MQ=255)                         tCAAACCAGACAATTTCTTCCTGATGATCTATCGCGCCCTGAGTCAACGTCGTGTGCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAg                                                                                                                            <  2:340614/149‑1 (MQ=255)                               cAGACAATTTCTTCCTGCAGATCTATCGCGCCCTGAGGCAACGTCGTGGGCCGCTGGCACGGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCcatg                                                                                                                      <  4:268195/149‑1 (MQ=255)                               cAGACAATTTCTTCCTGATGATCTATCGCGCCCTGAGTCAACGTCGTGTGCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCcatg                                                                                                                      <  1:29881/149‑1 (MQ=255)                                  aCAATTTCTTCCTGATGATCTATCGCGCCCTGAGTCAACGTCGTGTGCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCcatgcat                                                                                                                   <  5:203405/149‑1 (MQ=255)                                         cttcCTGATGATCTATCGCGCCCTGAGTCAACGTCGTGTGCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATATACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAgcagg                                                                                                            <  5:196243‑M2/149‑6 (MQ=255)                                          ttcCTGATGATCTATCGCGCCCTGAGTCAACGTCGTGTGCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAgcaggc                                                                                                           >  1:313327‑M2/1‑143 (MQ=255)                                              tgatgaTCTATCGCGCCCTGAGTCAACGTCGTGTGCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGAt                                                                                                       >  1:34694/1‑149 (MQ=255)                                                  gatCTATCGCGCCCTGAGTCAACGTCGTGTGCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCt                                                                                                   >  5:263644/1‑149 (MQ=255)                                                     cTATCGCGCCCTGCGTCAACGTCGTGTGCCGCTGGCACTGGGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTg                                                                                                 <  3:217769/148‑1 (MQ=255)                                                        tCGCGCCCTGAGTCAACGTCGTGTGCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGc                                                                                              >  1:199116/1‑148 (MQ=255)                                                          gcgcCCTGAGTCAACGTCGTGTGCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCag                                                                                           <  1:197211/149‑1 (MQ=255)                                                           cgcCCTGAGTCAACGTCGTGTGCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCa                                                                                            >  8:288444/1‑147 (MQ=255)                                                             cccTGAGTCAACGTCGTGTGCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGc                                                                                        <  6:263644/149‑1 (MQ=255)                                                              ccTGAGTCAACGTCGTGTGCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCtcatgcatggcctgcttgaactgcaggcccatcacgcagg                                                                                                            <  3:73237‑M1/128‑41 (MQ=255)                                                              ccTGAGTCAACGTCGTGTGCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCtcatgcatggcctgcttgaactgcaggcccatcacgcagg                                                                                                            >  4:73237‑M1/1‑88 (MQ=255)                                                                 gAGTCAACGTCGTGTGCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCaa                                                                                                                                >  7:193037/1‑105 (MQ=255)                                                                 gAGTCAACGTCGTGTGCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCaa                                                                                                                                <  8:193037/105‑1 (MQ=255)                                                                  aGTCAACGTCGTGTGCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGac                                                                                   <  6:101277/149‑1 (MQ=255)                                                                  aGTCAACGTCGTGTGCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGa                                                                                    <  7:288444/148‑1 (MQ=255)                                                                       aCGTCGTGTGCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCAccc                                                                              <  8:124410/149‑1 (MQ=255)                                                                                gCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCa                                                                      >  5:231062/1‑148 (MQ=255)                                                                                gCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCa                                                                      <  6:231062/148‑1 (MQ=255)                                                                                 ccGCTGTCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGGGTGATCGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGc                                                                       <  2:79821/146‑1 (MQ=255)                                                                                 ccGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCaa                                                                     <  6:227411/148‑1 (MQ=255)                                                                                       gCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCg                                                                <  2:199116/147‑1 (MQ=255)                                                                                       gCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGc                                                              >  6:196671/1‑149 (MQ=255)                                                                                         aCTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCtcatgcatggcctgcttgaactgcaggcccatcacgcaggcgtagatcacca                                                                                                <  4:97522‑M1/113‑53 (MQ=255)                                                                                         aCTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCtcatgcatggcctgcttgaactgcaggcccatcacgcaggcgtagatcacca                                                                                                >  3:97522‑M1/1‑61 (MQ=255)                                                                                         aCTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCa                                                            >  4:171006/1‑149 (MQ=255)                                                                                           tGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCAcc                                                          >  7:40707/1‑149 (MQ=255)                                                                                                    ccTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATc                                                                 <  2:286478/133‑1 (MQ=255)                                                                                                    ccTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATc                                                                 >  1:286478/1‑133 (MQ=255)                                                                                                    ccTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGctgctg                                                 <  7:168434/149‑1 (MQ=255)                                                                                                     cTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATg                                                                                                      >  8:325274/1‑95 (MQ=255)                                                                                                     cTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATg                                                                                                      <  7:325274/95‑1 (MQ=255)                                                                                                            aaCATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTTATGGGCCTGCAGTTCTAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCaa                                         <  1:178804/149‑1 (MQ=255)                                                                                                             aCATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAAc                                        <  6:196243/149‑1 (MQ=255)                                                                                                                           gcgctggcgctgGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGa                                                        <  2:221870/119‑1 (MQ=255)                                                                                                                           gcgctggcgctgGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGa                                                        >  1:221870/1‑119 (MQ=255)                                                                                                                               tggcgctggTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAAc                      <  3:284469/149‑1 (MQ=255)                                                                                                                                   ggtggTTATCTACGCCTGCGTGTTGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAAc                      <  4:58801/143‑1 (MQ=255)                                                                                                                                   gctggTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAACgag                   >  3:58801/1‑146 (MQ=255)                                                                                                                                     tggTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAgcaggcgtagatcaccagcgccagcgccaccaggaaaatgttggtgcaggcgatgcgcagt                                                    <  4:97522‑M2/113‑62 (MQ=255)                                                                                                                                     tggTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAgcaggcgtagatcaccagcgccagcgccaccaggaaaatgttggtgcaggcgatgcgcagt                                                    >  3:97522‑M2/1‑52 (MQ=255)                                                                                                                                       gTGATCTACGCCTGCGTTATGGGCCTGCAGTTAAAGCAGGACATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAACGTGCTa                <  7:313293/147‑1 (MQ=255)                                                                                                                                       gTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAACGTGCTa                <  3:171006/147‑1 (MQ=255)                                                                                                                                          aTCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAACGTGCTACTggg           >  5:22898/1‑149 (MQ=255)                                                                                                                                          aTCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAACGTGCTACTggg           >  2:259135/1‑149 (MQ=255)                                                                                                                                            cTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCtt                                                                                                  >  4:233885/1‑60 (MQ=255)                                                                                                                                            cTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCtt                                                                                                  <  3:233885/60‑1 (MQ=255)                                                                                                                                            cTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAACGTGCTACTGGGc          >  2:124189/1‑148 (MQ=255)                                                                                                                                              aCGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAACGTGCTACTGGGCAAc       >  3:318596/1‑149 (MQ=255)                                                                                                                                               cGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAACGTGCTACTGGGCAAcc      >  5:89394/1‑149 (MQ=255)                                                                                                                                                gCCTGCtcatgcatggcctgcttgaactgcaggcccatcacgcaggcgtagatcaccagcgccagcgccaccaggaaaatgttggtgcaggcgatgcgcagtgccagcggcacacgacgttgactcagggcgcgatagatcatcaggaa     >  1:313327‑M1/1‑6 (MQ=255)                                                                                                                                                 ccTGCtcatgcatggcctgcttgaactgcaggcccatcacgcaggcgtatatcaccagcgccagcgccaccaggaaaatgttggtgcaggcgatgcgcagtgccagcggcacacgacgttgactcagggcgcgatagatcatcaggaag    <  5:196243‑M1/149‑145 (MQ=255)                                                                                                                                                 ccTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAgcaggcgtagatcaccagcgccagcgccaccaggaaaatgttggtgcaggcgatgcgcagtgccagcggcacacgacgttgactcagg                         <  3:73237‑M2/128‑89 (MQ=255)                                                                                                                                                 ccTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAgcaggcgtagatcaccagcgccagcgccaccaggaaaatgttggtgcaggcgatgcgcagtgccagcggcacacgacgttgactcagg                         >  4:73237‑M2/1‑40 (MQ=255)                                                                                                                                                  cTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAACGTGCTACTGGGCAAc       >  6:291125/1‑145 (MQ=255)                                                                                                                                                  cTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAACGTGCTACTGGGCAAc       <  5:291125/145‑1 (MQ=255)                                                                                                                                                   tGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAACGTGCTACTGGGCAACCTGGt  >  6:245252/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                   GCTCTGTGAACCGGCCCACGCCAGTCAAACCAGACAATTTCTTCCTGATGATCTATCGCGCCCTGAGTCAACGTCGTGTGCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAACGTGCTACTGGGCAACCTGGT  >  NC_002947/5580961‑5581255

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.