New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5581109	51 (0.940)	4 (0.080)	4/248	NT	7.3%	coding (144/1458 nt)	PP_4910	hypothetical protein
	?	NC_002947	= 5581144	53 (1.030)					coding (179/1458 nt)	PP_4910	hypothetical protein

CTTCCTGATGATCTATCGCGCCCTGAGTCAACGTCGTGTGCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAACG‑‑TGCTACTGGGCAACCTGGTTAAAAACCCGCTGGTGGCCCATGCGGCAATCTA  >  NC_002947/5581001‑5581288                                                                                                                                                |                                                                                                                                                   cttcCTGATGATCTATCGCGCCCTGAGTCAACGTCGTGTGCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATATACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAgcagg                                                                                                                                               <  5:196243‑M2/149‑6 (MQ=255)  ttcCTGATGATCTATCGCGCCCTGAGTCAACGTCGTGTGCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAgcaggc                                                                                                                                              >  1:313327‑M2/1‑143 (MQ=255)      tgatgaTCTATCGCGCCCTGAGTCAACGTCGTGTGCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGAt                                                                                                                                          >  1:34694/1‑149 (MQ=255)          gatCTATCGCGCCCTGAGTCAACGTCGTGTGCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCt                                                                                                                                      >  5:263644/1‑149 (MQ=255)             cTATCGCGCCCTGCGTCAACGTCGTGTGCCGCTGGCACTGGGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTg                                                                                                                                    <  3:217769/148‑1 (MQ=255)                tCGCGCCCTGAGTCAACGTCGTGTGCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGc                                                                                                                                 >  1:199116/1‑148 (MQ=255)                  gcgcCCTGAGTCAACGTCGTGTGCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCag                                                                                                                              <  1:197211/149‑1 (MQ=255)                   cgcCCTGAGTCAACGTCGTGTGCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCa                                                                                                                               >  8:288444/1‑147 (MQ=255)                     cccTGAGTCAACGTCGTGTGCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGc                                                                                                                           <  6:263644/149‑1 (MQ=255)                          aGTCAACGTCGTGTGCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGac                                                                                                                      <  6:101277/149‑1 (MQ=255)                          aGTCAACGTCGTGTGCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGa                                                                                                                       <  7:288444/148‑1 (MQ=255)                               aCGTCGTGTGCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCAccc                                                                                                                 <  8:124410/149‑1 (MQ=255)                                        gCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCa                                                                                                         >  5:231062/1‑148 (MQ=255)                                        gCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCa                                                                                                         <  6:231062/148‑1 (MQ=255)                                         ccGCTGTCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGGGTGATCGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGc                                                                                                          <  2:79821/146‑1 (MQ=255)                                         ccGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCaa                                                                                                        <  6:227411/148‑1 (MQ=255)                                               gCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCg                                                                                                   <  2:199116/147‑1 (MQ=255)                                               gCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGc                                                                                                 >  6:196671/1‑149 (MQ=255)                                                 aCTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCa                                                                                               >  4:171006/1‑149 (MQ=255)                                                   tGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCAcc                                                                                             >  7:40707/1‑149 (MQ=255)                                                            ccTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATc                                                                                                    >  1:286478/1‑133 (MQ=255)                                                            ccTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATc                                                                                                    <  2:286478/133‑1 (MQ=255)                                                            ccTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGctgctg                                                                                    <  7:168434/149‑1 (MQ=255)                                                             cTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATg                                                                                                                                         <  7:325274/95‑1 (MQ=255)                                                             cTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATg                                                                                                                                         >  8:325274/1‑95 (MQ=255)                                                                    aaCATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTTATGGGCCTGCAGTTCTAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCaa                                                                            <  1:178804/149‑1 (MQ=255)                                                                     aCATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAAc                                                                           <  6:196243/149‑1 (MQ=255)                                                                                   gcgctggcgctgGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGa                                                                                           <  2:221870/119‑1 (MQ=255)                                                                                   gcgctggcgctgGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGa                                                                                           >  1:221870/1‑119 (MQ=255)                                                                                       tggcgctggTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAAc                                                         <  3:284469/149‑1 (MQ=255)                                                                                           ggtggTTATCTACGCCTGCGTGTTGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAAc                                                         <  4:58801/143‑1 (MQ=255)                                                                                           gctggTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAACgag                                                      >  3:58801/1‑146 (MQ=255)                                                                                             tggTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAgcaggcgtagatcaccagcgccagcgccaccaggaaaatgttggtgcaggcgatgcgcagt                                                                                       <  4:97522‑M2/113‑62 (MQ=255)                                                                                             tggTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAgcaggcgtagatcaccagcgccagcgccaccaggaaaatgttggtgcaggcgatgcgcagt                                                                                       >  3:97522‑M2/1‑52 (MQ=255)                                                                                               gTGATCTACGCCTGCGTTATGGGCCTGCAGTTAAAGCAGGACATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAACG‑‑TGCTa                                                 <  7:313293/147‑1 (MQ=255)                                                                                               gTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAACG‑‑TGCTa                                                 <  3:171006/147‑1 (MQ=255)                                                                                                  aTCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAACG‑‑TGCTACTggg                                            >  5:22898/1‑149 (MQ=255)                                                                                                  aTCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAACG‑‑TGCTACTggg                                            >  2:259135/1‑149 (MQ=255)                                                                                                    cTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCtt                                                                                                                                     >  4:233885/1‑60 (MQ=255)                                                                                                    cTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCtt                                                                                                                                     <  3:233885/60‑1 (MQ=255)                                                                                                    cTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAACG‑‑TGCTACTGGGc                                           >  2:124189/1‑148 (MQ=255)                                                                                                      aCGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAACG‑‑TGCTACTGGGCAAc                                        >  3:318596/1‑149 (MQ=255)                                                                                                       cGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAACG‑‑TGCTACTGGGCAAcc                                       >  5:89394/1‑149 (MQ=255)                                                                                                         ccTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAgcaggcgtagatcaccagcgccagcgccaccaggaaaatgttggtgcaggcgatgcgcagtgccagcggcacacgacgttgactcagg                                                            <  3:73237‑M2/128‑89 (MQ=255)                                                                                                         ccTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAgcaggcgtagatcaccagcgccagcgccaccaggaaaatgttggtgcaggcgatgcgcagtgccagcggcacacgacgttgactcagg                                                            >  4:73237‑M2/1‑40 (MQ=255)                                                                                                          cTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAACG‑‑TGCTACTGGGCAAc                                        <  5:291125/145‑1 (MQ=255)                                                                                                          cTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAACG‑‑TGCTACTGGGCAAc                                        >  6:291125/1‑145 (MQ=255)                                                                                                           tGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAACG‑‑TGCTACTGGGCAACCTGGt                                   >  6:245252/1‑149 (MQ=255)                                                                                                                gATGGGCCTGCAGTTCAAGTAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGCGCCTGACCCCCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCGAAGGACGTCCTCAGTCGGGACG‑‑TGGTACTGGGCCACCTGGTTacaa                              >  6:88270/1‑149 (MQ=255)                                                                                                                    ggCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAACG‑‑TGCTACTGGGCAACCTGGTTAAAAAccc                          >  5:117229/1‑149 (MQ=255)                                                                                                                    ggCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAACG‑‑TGCTACTGGGCAACCTGGTTAAAAAccc                          <  5:196671/149‑1 (MQ=255)                                                                                                                      ccTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATcc                                                                    >  6:72716/1‑107 (MQ=255)                                                                                                                       cTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAACG‑‑TGCTACTGGGCAACCTGGTTAAAAACCCGCt                       <  8:40707/149‑1 (MQ=255)                                                                                                                         gCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGCCATCCTCAGTGTCAACG‑‑TGCTACTGGGCAGCCTGGTTAAGAACCCGCtgg                     >  6:183627/1‑149 (MQ=255)                                                                                                                                      gCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAACG‑‑TGCTACTGGGCAACCTGGTTAAAAACCCGCTGGTGGccc               >  6:284553/1‑142 (MQ=255)                                                                                                                                      gCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAACG‑‑TGCTACTGGGCAACCTGGTTAAAAACCCGCTGGTGGccc               <  5:284553/142‑1 (MQ=255)                                                                                                                                       ccATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAACG‑‑TGCTACTGGGCAACCTGGTTAAAAACCCGCTGGTGGCCCATGCGGCa       <  6:89394/149‑1 (MQ=255)                                                                                                                                        catgcatgAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAACG‑‑TGCTACTGGGCAACCTGGTTAAAAACCCGCTGGTGGCCCATGCGGCaa      >  6:276558/1‑149 (MQ=255)                                                                                                                                        catgcatgAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAACG‑‑TGCTACTGGGCAACCTGGTTAAAAACCCGCTGGTGGCCAATGCGGCaa      >  2:298457/1‑149 (MQ=255)                                                                                                                                         atgcatgAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAACG‑‑TGCTACTGGGCAAc                                        >  2:138150/1‑114 (MQ=255)                                                                                                                                         atgcatgAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAACG‑‑TGCTACTGGGCAACCTGGTTAAAAACCCGCTGGTGGCCCATGCGGCaa      >  2:142920/1‑148 (MQ=255)                                                                                                                                         atgcatgAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCAAACGACATCCTCAGTCTCAACG‑‑TGCTACTGGGCAACCTGGTTAAAAACCCGCTGGTGGCCCATGCGGCaa      >  8:188193/1‑148 (MQ=255)                                                                                                                                            catgAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAACG‑‑TGCTACTGGGCAACCTGGTTAAAAACCCGCTGGTGGCCCATGCGGCAATCt   <  2:34694/148‑1 (MQ=255)                                                                                                                                              tgAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACAGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAACGTCTGCTACTGGGCAACCTGGTTAAAAACCCGCTGGTGGCCCATGCGGCAATCTa  <  1:259135/149‑1 (MQ=255)                                                                                                                                                |                                                                                                                                                   CTTCCTGATGATCTATCGCGCCCTGAGTCAACGTCGTGTGCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAACG‑‑TGCTACTGGGCAACCTGGTTAAAAACCCGCTGGTGGCCCATGCGGCAATCTA  >  NC_002947/5581001‑5581288

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.