New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5685459	79 (1.460)	4 (0.080)	4/244	NT	5.3%	coding (1434/4941 nt)	PP_4988	signal transduction histidine kinase CheA/CheY‑like receiver
	?	NC_002947	= 5685481	70 (1.380)					coding (1412/4941 nt)	PP_4988	signal transduction histidine kinase CheA/CheY‑like receiver

CCTGCTGCAGCGCTACAACCCCTTCCGGACTGAGCACGCTGCGGCCCTCGAGCACCCGGTTCAGCAGGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGAACACTTGGCGAAGCTCATCATCGATGCCATCGCCATTGCCGTCCTGGT  >  NC_002947/5685314‑5685607                                                                                                                                                  |                                                                                                                                                     ccTGCTGCAGCGCTACAACCCCTTCCGGACTGAGCACGCTGCGGCCCTCGAGCACCCGGTTCAGCAGGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGa                                                                                                                                                   >  2:250203/1‑149 (MQ=255)       gcAGCGCTACAACCCCTTCCGGACTGAGCACGCTGCGGCCCTCGAGCACCCGGTTCAGCAGGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACt                                                                                                                                             >  5:92198/1‑149 (MQ=255)         aGCGCTACAACCCCTTCCGGACTGAGCACGCTGCGACCCTCGAGCACCCGGTTCAGCAGGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTc                                                                                                                                           >  7:293594/1‑149 (MQ=255)             cTACAACCCCTTCCGGACTGAGCACGCTGCGGCCCTCGAGCACCCGGTTCAGCAGGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCAccc                                                                                                                                       <  8:830/149‑1 (MQ=255)             cTACAACCCCTTCCGGACTGAGCACGCTGCGGCCCTCGAGCACCCGGTTCAGCAGGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCAcc                                                                                                                                        >  3:128187/1‑148 (MQ=255)                cAACCCCTTCCGGACTGAGCACGCTGCGGCCCTCGAGCACCCGGTTCAGCAGGTGCTCGGCGCCCCAGGCCAGTTCAGCCCCCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGCCGCACTTCACCCAGt                                                                                                                                    >  5:38939/1‑149 (MQ=255)                 aaCCCCTTCCGGACTGAGCACGCTGCGGCCCTCGAGCACCCGGTTCAGCAGGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGaggcactgggtgaagtgcg                                                                                                                                   >  1:141377‑M1/1‑130 (MQ=255)                     ccTTCCGGACTGAGCACGCTGCGGCCCTCGAGCACCCGGTTCAGCAGGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTc                                                                                                                               <  2:132912‑M2/149‑2 (MQ=255)                     ccTTCCGGACTGAGCACGCTGCGGCCCTCGAGCACCCGGTTCAGCAGGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTc                                                                                                                               <  3:211056‑M2/149‑2 (MQ=255)                           ggACTGAGCACGCTGCGGCCCTCGAGCACCCGGTTCAGCAGGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTcgcgctg                                                                                                                         <  4:275073‑M2/149‑8 (MQ=255)                            gACTGAGCACGCTGCGGCCCTCGAGCACCCGGTTCAGCAGGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGaggcactgggtgaagtgcgtcgcgcgctgc                                                                                                                        <  2:141377‑M1/149‑31 (MQ=255)                             aCTGAGCACGCTGCGGCCCTCGAGCACCCGGTTCAGCAGGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCgctgct                                                                                                                       <  8:242519/149‑1 (MQ=255)                              cTGAGCACGCTGCGGCCCTCGAGCACCCGGTTCAGCAGGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGctgctg                                                                                                                      <  5:106000/149‑1 (MQ=255)                               tGAGAACGCTGCGGCCCTCGAGCACCCGGTTCAGCAGGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGAAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTgg                                                                                                                     >  6:172225/1‑149 (MQ=255)                                 aGCACGCTGCGGCCCTCGAGCACCCGGTTCAGCAGGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTgg                                                                                                                     <  6:158217/147‑1 (MQ=255)                                 aGCACGCTGCGGCCCTCGAGCACCCGGTTCAGCAGGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGtt                                                                                                                   >  7:268892/1‑149 (MQ=255)                                 aGCACGCTGCGGCCCTCGAGCACCCGGTTCAGCAGGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGtt                                                                                                                   <  3:314640/149‑1 (MQ=255)                                   cACGCTGCGGCCCTCGAGCACCCGGTTCAGCAGGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGt                                                                                                                 <  4:47108/149‑1 (MQ=255)                                   cACGCTGCGGCCCTCGAGCACCCGGTTCAGCAGGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGt                                                                                                                 >  2:240996/1‑149 (MQ=255)                                    aCGCTGCGGCCCTCGAGCACCCGGTTCAGCAGGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCCCCCAGTGCCTCGCGCTGCTGGTTGTc                                                                                                                >  7:167884/1‑149 (MQ=255)                                    aCGCTGCGGCCCTCGAGCACCCGGTTCAGCAGGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTc                                                                                                                <  4:128187/149‑1 (MQ=255)                                    aCGCTGCGGCCCTCGAGCACCCGGTTCAGCAGGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTc                                                                                                                >  6:329/1‑149 (MQ=255)                                      gCTGCGGCCCTCGAGCACCCGGTTCAGCAGGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCgg                                                                                                              >  2:231660/1‑149 (MQ=255)                                        tGCGGCCCTCGAGCACCCGGTTCAGCAGGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCCCCCAGTGCCTCGCGCTGCTGGTTGTCGGCa                                                                                                            >  7:313490/1‑149 (MQ=255)                                          cGGCCCTCGAGCACCCGGTTCAGCAGGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCAc                                                                                                           <  1:240996/148‑1 (MQ=255)                                           ggCCCTCGAGCACCCGGTTCAGCAGGTGCTCGTCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGaggcactgggtgaagtgcgtcgcgcgctg                                                                                                                         >  1:216263‑M1/1‑104 (MQ=255)                                           ggCCCTCGAGCACCCGGTTCAGCAGGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGaggcactgggtgaagtgcgtcgcgcgctg                                                                                                                         <  2:216263‑M1/133‑30 (MQ=255)                                            gCCCTCGAGCACCCGGTTCAGCAGGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGcc                                                                                                        >  3:91070/1‑149 (MQ=255)                                             cccTCGAGCACCCGGTTCAGCAGGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCa                                                                                                       <  8:268892/149‑1 (MQ=255)                                              ccTCGAGCACCCGGTTCAGCAGGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAg                                                                                                      >  5:288307/1‑149 (MQ=255)                                                  gAGCACCCGGTTCAGCAGGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCTCGCTGCTGGTTGTCGGCACGCCAGCGCa                                                                                                  <  5:172225/149‑1 (MQ=255)                                                  gAGCACCCGGTTCAGCAGGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCa                                                                                                  <  5:60228/149‑1 (MQ=255)                                                  gAGCACCCGGTTCAGCAGGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCa                                                                                                  <  4:113338/149‑1 (MQ=255)                                                         cGGTTCAGCAGGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTg                                                                                           <  4:211056/149‑1 (MQ=255)                                                           gTTCAGCAGGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGgc                                                                                         <  3:275073/149‑1 (MQ=255)                                                               agcagGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCt                                                                                      <  3:91117/148‑1 (MQ=255)                                                                  agGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGAt                                                                                  <  1:132912/149‑1 (MQ=255)                                                                    gTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGATGCCGCTGCCTATGAGTCTATGCAGCGCCCGACGCACTTCACCCAGTCCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGAGGCGCGCGAttt                                                                                >  8:265033/1‑149 (MQ=255)                                                                     tGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGtt                                                                                                                   <  8:137175/113‑1 (MQ=255)                                                                     tGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGtt                                                                                                                   >  7:141682/1‑113 (MQ=255)                                                                     tGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGtt                                                                                                                   >  7:137175/1‑113 (MQ=255)                                                                     tGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGtt                                                                                                                   <  8:141682/113‑1 (MQ=255)                                                                      gCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTcc                                                                              >  2:87223/1‑149 (MQ=255)                                                                       cTCGGCGCCCCAGGCCAGGTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGCGTGTATGCAGCGCGCGACGCACTTCAGCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCGAGCGCAGCCAGTGGCGCTCGATTTcc                                                                              <  7:265033/148‑1 (MQ=255)                                                                         cGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGgc                                                                           <  3:175279/149‑1 (MQ=255)                                                                          ggCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACt                                                                                                                                             >  3:214079/1‑82 (MQ=255)                                                                          ggCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACt                                                                                                                                             <  4:214079/82‑1 (MQ=255)                                                                          ggCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCAcc                                                                                                                                        <  6:223660/87‑1 (MQ=255)                                                                          ggCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCAcc                                                                                                                                        >  5:223660/1‑87 (MQ=255)                                                                          ggCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCt                                                                                      <  7:66896/137‑1 (MQ=255)                                                                          ggCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCt                                                                                      >  8:66896/1‑137 (MQ=255)                                                                          ggCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCgg                                                                            >  3:4086/1‑147 (MQ=255)                                                                          ggCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCgg                                                                            <  6:92198/147‑1 (MQ=255)                                                                           gcgcCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGgcag                                                                         <  3:51870/149‑1 (MQ=255)                                                                             gcCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGt                                                                                                                                    <  4:161265/88‑1 (MQ=255)                                                                             gcCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGt                                                                                                                                    >  3:161265/1‑88 (MQ=255)                                                                             cgcccAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGgcagca                                                                       <  1:46399/147‑1 (MQ=255)                                                                               cccAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGt                                                                     <  5:329/149‑1 (MQ=255)                                                                                   ggCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTcgc                                                                 <  4:91070/149‑1 (MQ=255)                                                                                         ttCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCt                                                           >  5:210060/1‑149 (MQ=255)                                                                                         ttCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCt                                                           >  2:198405/1‑149 (MQ=255)                                                                                            aGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCg                                                         <  8:293594/148‑1 (MQ=255)                                                                                               cACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCaa                                                     <  1:87223/149‑1 (MQ=255)                                                                                                 ccGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAg                                                    >  6:54451/1‑148 (MQ=255)                                                                                                          cATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGAACACTTgg                                          <  7:267311/149‑1 (MQ=255)                                                                                                               aCCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGAACACTTGGCGAAg                                     >  4:27745/1‑149 (MQ=255)                                                                                                               aCCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGAACACTTGGCGAAg                                     <  1:231660/149‑1 (MQ=255)                                                                                                                  aTGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGAACACTTGGCGAAGCtc                                  <  8:167884/149‑1 (MQ=255)                                                                                                                   tGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGAACACTTGGCGAAGCtca                                 <  5:54451/149‑1 (MQ=255)                                                                                                                         cGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGAACACTTGGCGAAGCTCatcatc                            >  3:142102/1‑148 (MQ=255)                                                                                                                         cGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGAACACTTGGCGAAGCTCatcatc                            >  7:223171/1‑148 (MQ=255)                                                                                                                           cTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGAACACTTGGCGa                                       <  4:316759/135‑1 (MQ=255)                                                                                                                           cTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGAACACTTGGCGa                                       >  3:316759/1‑135 (MQ=255)                                                                                                                           cTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGAACACTTGGCGAAGCTCATCATCGAt                         <  6:288307/149‑1 (MQ=255)                                                                                                                               cTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGaa                                                 <  6:53747/121‑1 (MQ=255)                                                                                                                               cTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGaa                                                 >  5:53747/1‑121 (MQ=255)                                                                                                                               cTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGAACACTTgg                                          <  1:187051/128‑1 (MQ=255)                                                                                                                               cTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGAACACTTgg                                          >  2:187051/1‑128 (MQ=255)                                                                                                                               cTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGAACACTTGGCGAAGCTCATCATCGATGCCa                     >  1:62742/1‑149 (MQ=255)                                                                                                                                tttGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCGGCAGTTCGCCCGCCTCGTCAAGGAACACTTGGCGAAGCTCATCATCGATGCCAt                    >  6:188791/1‑149 (MQ=255)                                                                                                                                   gAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGAACACTTGGCGAAGCTCATCATCGATGCCATCGc                 >  4:24712/1‑149 (MQ=255)                                                                                                                                      tgtATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGTGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGAACACTTGGCGAAGCTCATCATCGATGc                       >  1:343469/1‑140 (MQ=255)                                                                                                                                      tgtATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGTGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGAACACTTGGCGAAGCTCATCATCGATGc                       <  2:343469/140‑1 (MQ=255)                                                                                                                                        tATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGAACACTTGGCGAAGCTCATCATCGATGCCATCGCCAtt             <  6:210060/148‑1 (MQ=255)                                                                                                                                         aTGCAGCGCGCGACGCACTTCCCCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGAACACTTGGCGAAGCTCATCATCGATGCCATCGCCATTGc           >  8:295266/1‑149 (MQ=255)                                                                                                                                         aTGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGAACACTTGGCGAAGCTCATCATCGATGCCATCGCCATTGc           >  7:182367/1‑149 (MQ=255)                                                                                                                                           gCAGCGCGCGACGCACTTCACCCAGTGCCTcgcgctgcatacactcaaaggcagcggccgcatggtccatgccgaggcggtggctgaactggcctggggcgccgagcacctgctgaaccgggtgctcgagggccgcagcgtgctcagtc         <  2:141377‑M2/149‑120 (MQ=255)                                                                                                                                            cAGCGCGaggcactgggtgaagtgcgtcgcgcgctgcatacactcaaaggcagcggccgcatggtccatgccgaggcggtggctgaactggcctggggcgccgagcacctgctgaaccgggtgctcgagggccgcagcgtgctcagtcc        <  4:275073‑M1/149‑143 (MQ=255)                                                                                                                                            cAGCGCGCGACGCACTTCACCCAGTGCCTcgcgctgcatacactcaaaggcagcggccgcatggtccatgccgaggcggtggctgaactggcctggggcgccgagcacctgctgaaccgggtgctcgagggcc                        <  2:216263‑M2/133‑105 (MQ=255)                                                                                                                                            cAGCGCGCGACGCACTTCACCCAGTGCCTcgcgctgcatacactcaaaggcagcggccgcatggtccatgccgaggcggtggctgaactggcctggggcgacgagcacctgctgaaccgggtgctcgagggcc                        >  1:216263‑M2/1‑29 (MQ=255)                                                                                                                                            cAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGAACACTTGGCGAAGCTCATCATCGATGCCATCGCCATTGCCGt        >  1:108354/1‑149 (MQ=255)                                                                                                                                              gcgcgcGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGAACACTTGGCGAAGCTCATCATCGATGCCATCGCCATTGCCGTcc      <  8:223171/149‑1 (MQ=255)                                                                                                                                              gcgcgcGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGAACACTTGGCGAAGCTCATCATCGATGCCATCGCCATTGCCGTcc      >  8:308127/1‑149 (MQ=255)                                                                                                                                              gcgcgcGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGAACACTTGGCGAAGCTCATCATCGATGCCATCGCCATTGCCGTcc      >  3:252054/1‑149 (MQ=255)                                                                                                                                                  gaggcactgggtgaagtgcgtcgcgcgctgcatacactcaaaggcagcggccgcatggtccatgccgaggcggtggctgaactggcctggggcgccgagcacctgctgaaccgggtgctcgagggccgcagcgtgctcagtccggaagg  <  2:132912‑M1/149‑149 (MQ=255)                                                                                                                                                  gaggcactgggtgaagtgcgtcgcgcgctgcatacactcaaaggcagcggccgcatggtccatgccgaggcggtggctgaactggcctggggcgccgagcacctgctgaaccgggtgctcgagggccgcagcgtgctcagtccggaagg  <  3:211056‑M1/149‑149 (MQ=255)                                                                                                                                                  |                                                                                                                                                     CCTGCTGCAGCGCTACAACCCCTTCCGGACTGAGCACGCTGCGGCCCTCGAGCACCCGGTTCAGCAGGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGAACACTTGGCGAAGCTCATCATCGATGCCATCGCCATTGCCGTCCTGGT  >  NC_002947/5685314‑5685607

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.