New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5685459	79 (1.460)	4 (0.080)	4/244	NT	5.3%	coding (1434/4941 nt)	PP_4988	signal transduction histidine kinase CheA/CheY‑like receiver
	?	NC_002947	= 5685481	70 (1.380)					coding (1412/4941 nt)	PP_4988	signal transduction histidine kinase CheA/CheY‑like receiver

CCTTCCGGACTGAGCACGCTGCGGCCCTCGAGCACCCGGTTCAGCAGGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGAACACTTGGCGAAGCTCATCATCGATGCCATCGCCATTGCCGTCCTGGTCTGGGCTGGCCCCGACCACCA  >  NC_002947/5685334‑5685628                                                                                                                                                    |                                                                                                                                                    ccTTCCGGACTGAGCACGCTGCGGCCCTCGAGCACCCGGTTCAGCAGGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTc                                                                                                                                                    <  3:211056‑M2/149‑2 (MQ=255) ccTTCCGGACTGAGCACGCTGCGGCCCTCGAGCACCCGGTTCAGCAGGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTc                                                                                                                                                    <  2:132912‑M2/149‑2 (MQ=255)       ggACTGAGCACGCTGCGGCCCTCGAGCACCCGGTTCAGCAGGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTcgcgctg                                                                                                                                              <  4:275073‑M2/149‑8 (MQ=255)         aCTGAGCACGCTGCGGCCCTCGAGCACCCGGTTCAGCAGGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCgctgct                                                                                                                                            <  8:242519/149‑1 (MQ=255)          cTGAGCACGCTGCGGCCCTCGAGCACCCGGTTCAGCAGGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGctgctg                                                                                                                                           <  5:106000/149‑1 (MQ=255)           tGAGAACGCTGCGGCCCTCGAGCACCCGGTTCAGCAGGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGAAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTgg                                                                                                                                          >  6:172225/1‑149 (MQ=255)             aGCACGCTGCGGCCCTCGAGCACCCGGTTCAGCAGGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTgg                                                                                                                                          <  6:158217/147‑1 (MQ=255)             aGCACGCTGCGGCCCTCGAGCACCCGGTTCAGCAGGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGtt                                                                                                                                        <  3:314640/149‑1 (MQ=255)             aGCACGCTGCGGCCCTCGAGCACCCGGTTCAGCAGGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGtt                                                                                                                                        >  7:268892/1‑149 (MQ=255)               cACGCTGCGGCCCTCGAGCACCCGGTTCAGCAGGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGt                                                                                                                                      <  4:47108/149‑1 (MQ=255)               cACGCTGCGGCCCTCGAGCACCCGGTTCAGCAGGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGt                                                                                                                                      >  2:240996/1‑149 (MQ=255)                aCGCTGCGGCCCTCGAGCACCCGGTTCAGCAGGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCCCCCAGTGCCTCGCGCTGCTGGTTGTc                                                                                                                                     >  7:167884/1‑149 (MQ=255)                aCGCTGCGGCCCTCGAGCACCCGGTTCAGCAGGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTc                                                                                                                                     >  6:329/1‑149 (MQ=255)                aCGCTGCGGCCCTCGAGCACCCGGTTCAGCAGGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTc                                                                                                                                     <  4:128187/149‑1 (MQ=255)                  gCTGCGGCCCTCGAGCACCCGGTTCAGCAGGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCgg                                                                                                                                   >  2:231660/1‑149 (MQ=255)                    tGCGGCCCTCGAGCACCCGGTTCAGCAGGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCCCCCAGTGCCTCGCGCTGCTGGTTGTCGGCa                                                                                                                                 >  7:313490/1‑149 (MQ=255)                      cGGCCCTCGAGCACCCGGTTCAGCAGGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCAc                                                                                                                                <  1:240996/148‑1 (MQ=255)                        gCCCTCGAGCACCCGGTTCAGCAGGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGcc                                                                                                                             >  3:91070/1‑149 (MQ=255)                         cccTCGAGCACCCGGTTCAGCAGGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCa                                                                                                                            <  8:268892/149‑1 (MQ=255)                          ccTCGAGCACCCGGTTCAGCAGGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAg                                                                                                                           >  5:288307/1‑149 (MQ=255)                              gAGCACCCGGTTCAGCAGGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCTCGCTGCTGGTTGTCGGCACGCCAGCGCa                                                                                                                       <  5:172225/149‑1 (MQ=255)                              gAGCACCCGGTTCAGCAGGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCa                                                                                                                       <  4:113338/149‑1 (MQ=255)                              gAGCACCCGGTTCAGCAGGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCa                                                                                                                       <  5:60228/149‑1 (MQ=255)                                     cGGTTCAGCAGGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTg                                                                                                                <  4:211056/149‑1 (MQ=255)                                       gTTCAGCAGGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGgc                                                                                                              <  3:275073/149‑1 (MQ=255)                                           agcagGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCt                                                                                                           <  3:91117/148‑1 (MQ=255)                                              agGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGAt                                                                                                       <  1:132912/149‑1 (MQ=255)                                                gTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGATGCCGCTGCCTATGAGTCTATGCAGCGCCCGACGCACTTCACCCAGTCCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGAGGCGCGCGAttt                                                                                                     >  8:265033/1‑149 (MQ=255)                                                 tGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGtt                                                                                                                                        >  7:137175/1‑113 (MQ=255)                                                 tGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGtt                                                                                                                                        <  8:141682/113‑1 (MQ=255)                                                 tGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGtt                                                                                                                                        >  7:141682/1‑113 (MQ=255)                                                 tGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGtt                                                                                                                                        <  8:137175/113‑1 (MQ=255)                                                  gCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTcc                                                                                                   >  2:87223/1‑149 (MQ=255)                                                   cTCGGCGCCCCAGGCCAGGTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGCGTGTATGCAGCGCGCGACGCACTTCAGCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCGAGCGCAGCCAGTGGCGCTCGATTTcc                                                                                                   <  7:265033/148‑1 (MQ=255)                                                     cGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGgc                                                                                                <  3:175279/149‑1 (MQ=255)                                                      ggCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCt                                                                                                           >  8:66896/1‑137 (MQ=255)                                                      ggCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCt                                                                                                           <  7:66896/137‑1 (MQ=255)                                                      ggCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCgg                                                                                                 >  3:4086/1‑147 (MQ=255)                                                      ggCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCgg                                                                                                 <  6:92198/147‑1 (MQ=255)                                                       gcgcCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGgcag                                                                                              <  3:51870/149‑1 (MQ=255)                                                         cgcccAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGgcagca                                                                                            <  1:46399/147‑1 (MQ=255)                                                           cccAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGt                                                                                          <  5:329/149‑1 (MQ=255)                                                               ggCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTcgc                                                                                      <  4:91070/149‑1 (MQ=255)                                                                     ttCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCt                                                                                >  2:198405/1‑149 (MQ=255)                                                                     ttCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCt                                                                                >  5:210060/1‑149 (MQ=255)                                                                        aGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCg                                                                              <  8:293594/148‑1 (MQ=255)                                                                           cACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCaa                                                                          <  1:87223/149‑1 (MQ=255)                                                                             ccGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAg                                                                         >  6:54451/1‑148 (MQ=255)                                                                                      cATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGAACACTTgg                                                               <  7:267311/149‑1 (MQ=255)                                                                                           aCCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGAACACTTGGCGAAg                                                          >  4:27745/1‑149 (MQ=255)                                                                                           aCCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGAACACTTGGCGAAg                                                          <  1:231660/149‑1 (MQ=255)                                                                                              aTGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGAACACTTGGCGAAGCtc                                                       <  8:167884/149‑1 (MQ=255)                                                                                               tGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGAACACTTGGCGAAGCtca                                                      <  5:54451/149‑1 (MQ=255)                                                                                                     cGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGAACACTTGGCGAAGCTCatcatc                                                 >  3:142102/1‑148 (MQ=255)                                                                                                     cGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGAACACTTGGCGAAGCTCatcatc                                                 >  7:223171/1‑148 (MQ=255)                                                                                                       cTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGAACACTTGGCGa                                                            >  3:316759/1‑135 (MQ=255)                                                                                                       cTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGAACACTTGGCGa                                                            <  4:316759/135‑1 (MQ=255)                                                                                                       cTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGAACACTTGGCGAAGCTCATCATCGAt                                              <  6:288307/149‑1 (MQ=255)                                                                                                           cTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGaa                                                                      >  5:53747/1‑121 (MQ=255)                                                                                                           cTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGaa                                                                      <  6:53747/121‑1 (MQ=255)                                                                                                           cTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGAACACTTgg                                                               <  1:187051/128‑1 (MQ=255)                                                                                                           cTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGAACACTTgg                                                               >  2:187051/1‑128 (MQ=255)                                                                                                           cTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGAACACTTGGCGAAGCTCATCATCGATGCCa                                          >  1:62742/1‑149 (MQ=255)                                                                                                            tttGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCGGCAGTTCGCCCGCCTCGTCAAGGAACACTTGGCGAAGCTCATCATCGATGCCAt                                         >  6:188791/1‑149 (MQ=255)                                                                                                               gAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGAACACTTGGCGAAGCTCATCATCGATGCCATCGc                                      >  4:24712/1‑149 (MQ=255)                                                                                                                  tgtATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGTGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGAACACTTGGCGAAGCTCATCATCGATGc                                            <  2:343469/140‑1 (MQ=255)                                                                                                                  tgtATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGTGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGAACACTTGGCGAAGCTCATCATCGATGc                                            >  1:343469/1‑140 (MQ=255)                                                                                                                    tATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGAACACTTGGCGAAGCTCATCATCGATGCCATCGCCAtt                                  <  6:210060/148‑1 (MQ=255)                                                                                                                     aTGCAGCGCGCGACGCACTTCCCCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGAACACTTGGCGAAGCTCATCATCGATGCCATCGCCATTGc                                >  8:295266/1‑149 (MQ=255)                                                                                                                     aTGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGAACACTTGGCGAAGCTCATCATCGATGCCATCGCCATTGc                                >  7:182367/1‑149 (MQ=255)                                                                                                                       gCAGCGCGCGACGCACTTCACCCAGTGCCTcgcgctgcatacactcaaaggcagcggccgcatggtccatgccgaggcggtggctgaactggcctggggcgccgagcacctgctgaaccgggtgctcgagggccgcagcgtgctcagtc                              <  2:141377‑M2/149‑120 (MQ=255)                                                                                                                        cAGCGCGCGACGCACTTCACCCAGTGCCTcgcgctgcatacactcaaaggcagcggccgcatggtccatgccgaggcggtggctgaactggcctggggcgccgagcacctgctgaaccgggtgctcgagggcc                                             <  2:216263‑M2/133‑105 (MQ=255)                                                                                                                        cAGCGCGCGACGCACTTCACCCAGTGCCTcgcgctgcatacactcaaaggcagcggccgcatggtccatgccgaggcggtggctgaactggcctggggcgacgagcacctgctgaaccgggtgctcgagggcc                                             >  1:216263‑M2/1‑29 (MQ=255)                                                                                                                        cAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGAACACTTGGCGAAGCTCATCATCGATGCCATCGCCATTGCCGt                             >  1:108354/1‑149 (MQ=255)                                                                                                                          gcgcgcGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGAACACTTGGCGAAGCTCATCATCGATGCCATCGCCATTGCCGTcc                           <  8:223171/149‑1 (MQ=255)                                                                                                                          gcgcgcGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGAACACTTGGCGAAGCTCATCATCGATGCCATCGCCATTGCCGTcc                           >  8:308127/1‑149 (MQ=255)                                                                                                                          gcgcgcGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGAACACTTGGCGAAGCTCATCATCGATGCCATCGCCATTGCCGTcc                           >  3:252054/1‑149 (MQ=255)                                                                                                                                gACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGAACACTTGGCGAAGCTCATCATCGATGCCATCGCCATTGCCGTCCTGGTCt                     >  5:302472/1‑149 (MQ=255)                                                                                                                                  cGCACTTCACCCAGTGCCTcgcgctgcatacactcaaaggcagcggccgcatggtccatgccgaggcggtggctgaactggcctggggcgccgagcacctgctgaaccgggtgctcgagggccgcagcgtgctcagtccggaaggggtt                   >  1:141377‑M2/1‑19 (MQ=255)                                                                                                                                   gCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGAACACTTGGCGAAGCTCATCATCGATGCCATCGCCATTGCCGTCCTGGTCTggg                  <  3:27745/149‑1 (MQ=255)                                                                                                                                   gCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGAACACTTGGCGAAGCTCATCATCGATGCCATCGCCATTGCCGTCCTGGTCTggg                  <  1:109219/149‑1 (MQ=255)                                                                                                                                      cTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCAATCCAGCGCAGCCAGTGGCGCTCGATTTCTCGCAGCAGTTAGCCCGACTCGTCAAGGAACACTTGGCGAAGCTCATCATCGATGCCATCGCCATTTCAGTCCTGGTCTGTGCTg               >  6:12301/1‑149 (MQ=255)                                                                                                                                         cACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGAACACTTGGCGAAGCTCATCATCGATGCCATCGCCATTGCCGTCCTGGTCTGGGCTGGc             <  2:62742/148‑1 (MQ=255)                                                                                                                                           cccAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGAACACTTGGCGAAGCTCATCATCGATGCCATCGCCATTGCCGTCCTGGTCTGGGCTGGcccc          >  7:281283/1‑149 (MQ=255)                                                                                                                                             ccgTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCATTTCGCCCGCCTCGTCAAGGAACACTTGGCGAAGCTCATCATCGATGCCATCGCCATTGCCGTCCTGGTCTGGGCTGGCCCCGa        <  8:313490/147‑1 (MQ=255)                                                                                                                                              aGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGAACACTTGGCGAAGCTCATCATCGATGCCATCGCCATTGCCGTCCTGGTCTGGGCTGGCCCCGac       >  8:239970/1‑149 (MQ=255)                                                                                                                                               gTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGAACACTTGGCGAAGCTCATCATCGATGCCATCGCCATTGCCGTCCTGGTCTGGGCTGGCCCCGacc      >  6:329513/1‑149 (MQ=255)                                                                                                                                                  ccTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGAACACTTGGCGAAGCTCATCATCGATGCCATCGCCATTGCCGTCCTGGTCTGGGCTGGCCCCGaccacc   >  1:307900/1‑149 (MQ=255)                                                                                                                                                   cTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCGGCAGTTCGCCCGCCTCGTCAAGGAACACTTGGCGAAGCTCATCATCGATGCCATCGCCATTGCCGTCCTGGTCTGGGCTGGCCCCGAccacca  <  5:188791/149‑1 (MQ=255)                                                                                                                                                   cTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGAACACTTGGCGAAGCTCATCATCGATGCCATc                                        <  1:75205/111‑1 (MQ=255)                                                                                                                                                   cTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGAACACTTGGCGAAGCTCATCATCGATGCCATc                                        >  2:75205/1‑111 (MQ=255)                                                                                                                                                    |                                                                                                                                                    CCTTCCGGACTGAGCACGCTGCGGCCCTCGAGCACCCGGTTCAGCAGGTGCTCGGCGCCCCAGGCCAGTTCAGCCACCGCCTCGGCATGGACCATGCGGCCGCTGCCTTTGAGTGTATGCAGCGCGCGACGCACTTCACCCAGTGCCTCGCGCTGCTGGTTGTCGGCACGCCAGCGCAGCCAGTGGCGCTCGATTTCCGGCAGCAGTTCGCCCGCCTCGTCAAGGAACACTTGGCGAAGCTCATCATCGATGCCATCGCCATTGCCGTCCTGGTCTGGGCTGGCCCCGACCACCA  >  NC_002947/5685334‑5685628

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.