New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5799887 =76 (1.410)6 (0.120) 5/246 NT 8.2% coding (1089/1098 nt) aroB 3‑dehydroquinate synthase
?NC_002947 5799924 = 63 (1.230)coding (1052/1098 nt) aroB 3‑dehydroquinate synthase

GTTGGCCAAGCACGGGCTTGCGCTGGGCCGGGAAGAACTTGAAGCCAGGTACGCGGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCGCAGCAGCACCAGACGCAAACGACCGTCGAGCACCTTCTTGTCGACCGCCATGTGCTC  >  NC_002947/5799739‑5800033
                                                                                                                                                    |                                                                                                                                                  
gTTGGCCAAGCACGGGCTTGCGCTGGGCCGGGAAGAACTTGAAGCCAGGTACGCGGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTgg                                                                                                                                                    <  2:33599/149‑1 (MQ=255)
gTTGGCCAAGCACGGGCTTGCGCTGGGCCGGGAAGAACTTGAAGCCAGGTACGCGGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTgg                                                                                                                                                    <  8:321260/149‑1 (MQ=255)
gTTGGCCAAGCACGGGCTTGCGCTGGGCCGGGAAGAACTTGAAGCCACGGACGCGGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTgg                                                                                                                                                    <  4:241178/149‑1 (MQ=255)
    gccaccacaggaaatgaccccggcgcatttcatggagcacatggcggtcgacaagaaggtgctcgacggtcgtttgcgtctggtgctgctgcgccagatgggcgaggccgtggtgaccgacgactattcgaaagagattctccaGGCCa                                                                                                                                                <  3:15515‑M1/5‑1 (MQ=255)
    gCCAAGCACGGGCTTGCGCTGGGCCGGGAAGAACTTGAAGCCAGGTACGCGGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGcc                                                                                                                                                 <  6:260875/148‑1 (MQ=255)
     ccaccacaggaaatgaccccggcgcatttcatggagcacatggcggtcgacaagaaggtgctcgacggtcgtttgcgtctggtgctgctgcgccagatgggcgaggccgtggtgaccgacgactattcgaaagagattctccaGGCCAc                                                                                                                                               <  8:111039‑M1/6‑1 (MQ=255)
     ccaccacaggaaatgaccccggcgcatttcatggagcacatggcggtcgacaagaaggtgctcgacggtcgtttgcgtctggtgctgctgcgccagatgggcgaggccgtggtgaccgacgactattcgaaagagattctccaGGCCAc                                                                                                                                               <  5:95673‑M1/6‑1 (MQ=255)
     ccaccacagcaaatgaccccggcgcatttcatggagcacatggctgtcgacacgaaggtgctcgacggtcgtttgcgtctggtgctgctgcgccagatgggcgaggccgtggtgaccgacgactattcgaaagagattctccaGGCCAc                                                                                                                                               >  6:279430‑M1/144‑149 (MQ=255)
     ccAAGCACGGGCTTGCGCTGGGCCGGGAAGAACTTGAAGCCAGGTACGCGGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCAc                                                                                                                                               >  4:34526/1‑149 (MQ=255)
      cAAGCACGGGCTTGCGCTGGGCCGGGAAGAACTTGAAGCCAGGTACGCGGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTgg                                                                                                                                                    <  1:68744/143‑1 (MQ=255)
      cAAGCACGGGCTTGCGCTGGGCCGGGAAGAACTTGAAGCCAGGTACGCGGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTgg                                                                                                                                                    >  2:68744/1‑143 (MQ=255)
      cAAGCACGGGCTTGCGCTGGGCCGGGAAGAACTTGAAGCCAGGTACGCGGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCAc                                                                                                                                               >  7:153965/1‑148 (MQ=255)
       aaGCACGGGCTTGCGCTGGGCCGGGAAGAACTTGAAGCCAGGTACGCGGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGa                                                                                                                                             >  2:77058/1‑149 (MQ=255)
          cACGGGCTTGCGCTGGGCCGGGAAGAACTTGAAGCCAGGTACGCGGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATcg                                                                                                                                          >  1:292333/1‑149 (MQ=255)
             gggCTTGCGCTGGGCCGGGAAGAACTTGAAGCCAGGTACGCGGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATcgcgc                                                                                                                                       <  3:321112/149‑1 (MQ=255)
             gggCTTGCGCTGGGCCGGGAAGAACTTGAAGCCAGGTACGCGGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATcgcgc                                                                                                                                       >  8:255771/1‑149 (MQ=255)
               gCTTGCGCTGGGCCGGGAAGAACTTGAAGCCAGGTACGCGGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGTGCgg                                                                                                                                     <  4:46566/149‑1 (MQ=255)
               gCTTGCGCTGGGCCGGGAAGAACTTGAAGCCAGGTACGCGGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCgg                                                                                                                                     <  7:305746/149‑1 (MQ=255)
                   gcgcCGGGCCGGGAAGAACTTGCAGCCAGGCACGCGGGGCGCGAACGGATCATGGCTCAACTGCTACTGCTCGAGAAACGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACCACCTCAAAGCTGGGCCACGATCGCGCGGTa                                                                                                                                   <  4:230306/147‑1 (MQ=255)
                     gcTGGGCCGGGAAGAACTTGAAGCCAGGTACGCGGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATcc                                                                                                                               <  3:34526/149‑1 (MQ=255)
                         ggCCGGGAAGAACTTGAAGCCAGGTACGCGGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATccgcc                                                                                                                            >  2:335331/1‑148 (MQ=255)
                            cGGGAAGAACTTGAAGCCAGGTACGCGGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACa                                                                                                                        <  2:106670/149‑1 (MQ=255)
                             gggAAGAACTTGAAGCCAGGTACGCGGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAg                                                                                                                       <  7:255771/149‑1 (MQ=255)
                              ggAAGAACTTGAAGCCAGGTACGCGGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCgg                                                                                                                                     <  3:111230/134‑1 (MQ=255)
                              ggAAGAACTTGAAGCCAGGTACGCGGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCgg                                                                                                                                     >  4:111230/1‑134 (MQ=255)
                              ggAAGAACTTGAAGCCAGGTACGCGGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGc                                                                                                                      <  5:270867/149‑1 (MQ=255)
                              ggAAGAACTTGAAGCCAGGTACGCGGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGc                                                                                                                      <  7:34352/149‑1 (MQ=255)
                                aagaaCTTGAAGCCAGGTACGCGGGGCGCGAACGGATCAGGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGt                                                                                                                    >  5:172781/1‑149 (MQ=255)
                                   aaCTTGAAGCCAGGTACGCGGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGc                                                                                                                 <  5:348119/149‑1 (MQ=255)
                                     ggagcacatggcggtcgacaagaaggtgctcgacggtcgtttgcgtctggtgctgctgcgccagatgggcgaggccgtggtgaccgacgactattcgaaagagattctccaGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGc                                                                                                                 <  5:233967‑M1/36‑1 (MQ=255)
                                     ggagcacatggcggtcgacaagaaggtgctcgacggtcgtttgcgtctggtgctgctgcgccagatgggcgaggccgtggtgaccgacgactattcgaaagagattctccaGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGc                                                                                                                 >  6:233967‑M1/112‑147 (MQ=255)
                                      ttGAAGCCAGGTACGCGGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTg                                                                                                              >  2:178496/1‑149 (MQ=255)
                                        gcacatggcggtcgacaagaaggtgctcgacggtcgtttgcgtctggtgctgctgcgccagatgggcgaggccgtggtgaccgacgactattcgaaagagattctccaGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGga                                                                                                            >  6:95673‑M1/109‑149 (MQ=255)
                                         cacatggcggtcgacaagaaggtgctcgacggtcgtttgcgtctggtgctgctgcgccagatgggcgaggccgtggtgaccgacgactattcgaaagagattctccaGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGgag                                                                                                           >  3:290343‑M1/108‑149 (MQ=255)
                                         aaGCCAGGTACGCGGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGga                                                                                                            <  8:153965/148‑1 (MQ=255)
                                          aGCCAGGTACGCGGGGCGCGAACGGATCACGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGgaga                                                                                                          <  6:172781/149‑1 (MQ=255)
                                           gCCAGGTACGCGGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGgaga                                                                                                          >  8:130194/1‑148 (MQ=255)
                                            ccAGGTACGCGGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAAt                                                                                                        >  6:13009/1‑149 (MQ=255)
                                                   cgcgGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCttt                                                                                                  <  2:292333/148‑1 (MQ=255)
                                                      ggggCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGaa                                                                                              <  1:318313/149‑1 (MQ=255)
                                                      ggggCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCAGGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGaa                                                                                              >  6:286023/1‑149 (MQ=255)
                                                       gggCGCGAACTGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTTTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAAt                                                                                             <  7:300468/149‑1 (MQ=255)
                                                        ggCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATa                                                                                            <  5:61114/149‑1 (MQ=255)
                                                               aCGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGtcgtcg                                                                                     >  7:111039/1‑149 (MQ=255)
                                                               aCGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGCAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGtcgtcg                                                                                     <  1:77058/149‑1 (MQ=255)
                                                                 ggATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGt                                                                                   <  3:141663/149‑1 (MQ=255)
                                                                   aTCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTca                                                                                 >  4:271680/1‑149 (MQ=255)
                                                                    tCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTcac                                                                                >  6:191335/1‑149 (MQ=255)
                                                                        ggCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACg                                                                            >  1:217963/1‑149 (MQ=255)
                                                                         gCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACgg                                                                           <  1:178496/149‑1 (MQ=255)
                                                                             accgggTAATGGTCGAGAACGGCCGCATCGGCATGCAAACTTGTCATTGCGCTGGCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTc                                                                       <  8:170631/145‑1 (MQ=255)
                                                                             aaCTGGCAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGAGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTc                                                                       <  6:16555/149‑1 (MQ=255)
                                                                                 gtctggtgctgctgcgccagatgggcgaggccgtggtgaccgacgactattcgaaagagattctccaGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGga                                                                                                            <  4:80289‑M1/41‑1 (MQ=255)
                                                                                 gtctggtgctgctgcgccagatgggcgaggccgtggtgaccgacgactattcgaaagagattctccaGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGga                                                                                                            >  3:80289‑M1/68‑108 (MQ=255)
                                                                                  gTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGccc                                                                   <  5:13009/148‑1 (MQ=255)
                                                                                  gTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCa                                                                  >  4:15515/1‑149 (MQ=255)
                                                                                   tAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTc                                                                                  <  1:208377/132‑1 (MQ=255)
                                                                                   tAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTc                                                                                  >  2:208377/1‑132 (MQ=255)
                                                                                    aaTGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAAtctc                                                                                                     >  2:342182/1‑112 (MQ=255)
                                                                                    aaTGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAAtctc                                                                                                     <  1:342182/112‑1 (MQ=255)
                                                                                     aTGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATc                                                                <  1:335331/148‑1 (MQ=255)
                                                                                       ggTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTgg                                                             >  3:139496/1‑149 (MQ=255)
                                                                                          cGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTc                                                                       >  8:60760/1‑136 (MQ=255)
                                                                                          cGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTc                                                                       <  7:60760/136‑1 (MQ=255)
                                                                                                aGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCACGCCCATCTGGCgcagcag                                                     >  4:66236/1‑148 (MQ=255)
                                                                                                   ccTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCgcagc                                                       <  6:31183/143‑1 (MQ=255)
                                                                                                   ccTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTATCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCgcagc                                                       >  5:31183/1‑143 (MQ=255)
                                                                                                    cTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCgcagcagca                                                   >  8:74325/1‑146 (MQ=255)
                                                                                                    cTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCgcagcagca                                                   <  7:74325/146‑1 (MQ=255)
                                                                                                     tCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAAtctc                                                                                                     >  1:264191/1‑95 (MQ=255)
                                                                                                     tCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAAtctc                                                                                                     <  2:264191/95‑1 (MQ=255)
                                                                                                     tCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCGCAGCAGCAc                                                  >  5:15988/1‑146 (MQ=255)
                                                                                                       aTCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTgg                                                             >  8:285651/1‑133 (MQ=255)
                                                                                                       aTCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTgg                                                             <  7:285651/133‑1 (MQ=255)
                                                                                                       aTCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCGCAGCAGCACCAGAc                                             >  5:28688/1‑149 (MQ=255)
                                                                                                              tGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAAt                                                                                                        >  3:15793/1‑83 (MQ=255)
                                                                                                              tGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAAt                                                                                                        <  4:15793/83‑1 (MQ=255)
                                                                                                              tGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCGCAGCAGCACCAGACGCAAAc                                       >  6:63003/1‑148 (MQ=255)
                                                                                                                 aaaCTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCGCAGCAGCACCAGACGCAAACGAcc                                   >  1:43654/1‑149 (MQ=255)
                                                                                                                   aCTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCGCAGCAGCAc                                                  <  5:26628/132‑1 (MQ=255)
                                                                                                                   aCTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCGCAGCAGCAc                                                  >  6:26628/1‑132 (MQ=255)
                                                                                                                    cTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCgcagca                                                      >  5:271373/1‑127 (MQ=255)
                                                                                                                    cTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCgcagca                                                      <  6:271373/127‑1 (MQ=255)
                                                                                                                    cTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCGCAGCAGCACCAGACGCAAACGACCGTc                                <  6:15988/149‑1 (MQ=255)
                                                                                                                       gTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCGCAGCAGCACCAGACGCAAACGACCGTCg                               <  2:217963/147‑1 (MQ=255)
                                                                                                                       gTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCGCAGCAGCACCAGACGCAAACGACCGTCGa                              <  3:271680/148‑1 (MQ=255)
                                                                                                                          aTTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCGCAGCAGCACCAGACGCAAACGACCGTCGAGCAc                          >  2:300805/1‑149 (MQ=255)
                                                                                                                           ttGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCGCAGCAGCACCAGACGCAAACGACCGTCGAGCAcc                         >  4:120004/1‑149 (MQ=255)
                                                                                                                              cgcTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCGCAGCAGCACCAGACGCAAACGACCGTCGAGCACcttc                      <  7:130194/149‑1 (MQ=255)
                                                                                                                                         ccTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCGCAGCAGCACCAGACGCAAACGACCGTCGAGCACCTTCTTGTCGACCGc           >  2:326562/1‑149 (MQ=255)
                                                                                                                                         ccTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGAAAGCGTGGCCTGGAGAATCTCTTTCGAAAAGTCGTCGGTCACCACGGACTCGCCCATCTGGCGCAGCAGCACCAGACGCAAACGACCGTCGAGCACCTTCTTGTCGACCGc           >  7:79447/1‑149 (MQ=255)
                                                                                                                                             aaaGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCGCAGCAGCACCAGACGCAAACGACCGTCGAGCACCTTCTTGTCGACCGCCAt        <  1:326562/148‑1 (MQ=255)
                                                                                                                                                  tGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCGCAGCAGCACCAGACGCAAACGACCGTCGAGCACCTTCTTGTCGACCGCCATGTGCTc  >  4:265056/1‑149 (MQ=255)
                                                                                                                                                   gggCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCGCAGCAGCACCAGACGCAAACGACCGTCGAGCACCTTCTTGTCGACCGCCATGTGCTc  >  4:308770/1‑148 (MQ=255)
                                                                                                                                                    |                                                                                                                                                  
GTTGGCCAAGCACGGGCTTGCGCTGGGCCGGGAAGAACTTGAAGCCAGGTACGCGGGGCGCGAACGGATCATGGCTCAACTGGTAATGGTCGAGAAAGGCCTCATCGGCATGCAAACTTGTCATTGCGCTGTCACAACCTCAAAGCTGGGCCACGATCGCGCGGTAATCCGCCGACAGCGTGGCCTGGAGAATCTCTTTCGAATAGTCGTCGGTCACCACGGCCTCGCCCATCTGGCGCAGCAGCACCAGACGCAAACGACCGTCGAGCACCTTCTTGTCGACCGCCATGTGCTC  >  NC_002947/5799739‑5800033

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.