New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 563101	62 (1.150)	4 (0.080)	4/250	NT	6.2%	coding (184/1002 nt)	rpoA	DNA‑directed RNA polymerase subunit alpha
	?	NC_002947	= 563125	62 (1.190)					coding (208/1002 nt)	rpoA	DNA‑directed RNA polymerase subunit alpha

GCGCCAAAATTACGCTCGAGCCTCTCGAGCGTGGTTTCGGCCATACCCTGGGCAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTACGCTGACCTTGTCGAAAAAGGGTTCGGGGGTGGTTACCGCTGCCGATATTCAGCTGGA  >  NC_002947/562985‑563270                                                                                                                                             |                                                                                                                                                  gcgcCAAAATTACGCTCGAGCCTCTCGAGCGTGGTTTCGGCCATACCCTGGGCAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCg                                                                                                                                             >  8:131141/1‑147 (MQ=255)  cgcCAAAATTACGCTCGAGCCTCTCGAGCGTGGTTTCGGCCATACCCTGGGCAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAg                                                                                                                                          <  8:93817/149‑1 (MQ=255)  cgcCAAAATTACGCTCGAGCCTCTCGAGCGTGGTTTCGGCCATACCCTGGGCAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAg                                                                                                                                          <  7:166719/149‑1 (MQ=255)    ccAAAATTACGCTCGAGCCTCTCGAGCGTGGTTTCGGCCATACCCTGGGCAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGgt                                                                                                                                        <  4:123266/149‑1 (MQ=255)      aaaaTTACGCTCGAGCCTCTCGAGCGTGGTTTCGGCCATACCCTGGGCAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGgtgt                                                                                                                                      >  8:87954/1‑149 (MQ=255)          ttACGCTCGAGCCTCTCGAGCGTGGTTTCGGCCATACCCTGGGCAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAg                                                                                                                                  <  5:168486/149‑1 (MQ=255)          ttACGCTCGAGCCTCTCGAGCGTGGTTTCGGCCATACCCTGGGCAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAg                                                                                                                                  <  1:132988/149‑1 (MQ=255)          ttACGCTCGAGCCTCTCGAGCGTGGTTTCGGCCATACCCTGGGCAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAg                                                                                                                                  >  4:211525/1‑149 (MQ=255)          ttACGCTCGAGCCTCTCGAGCGTGGTTTCGGCCATACCCTGGGCAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAg                                                                                                                                  >  3:278861/1‑149 (MQ=255)           caCGCTCGAGAGGCTCGAGCGTGGTTTCGGCCATACCCTGGGCAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAg                                                                                                                                  >  5:350422/2‑148 (MQ=255)             cGCTCGAGCCTCTCGAGCGTGGTTTCGGCCATACCCTGGGCAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGaa                                                                                                                               <  7:176633/149‑1 (MQ=255)              gCTCGAGCCTCTCGAGCGTGGTTTCGGCCATACCCTGGGCAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAgg                                                                                                                                 >  2:79611/1‑146 (MQ=255)                tCGAGCCTCTCGAGCGTGGTTTCGGCCATACCCTGGGCAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGAc                                                                                                                            >  4:129905/1‑149 (MQ=255)                  gAGCCTCTCGAGCGTGGTTTCGGCCATACCCTGGGCAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGAc                                                                                                                            <  5:28648/147‑1 (MQ=255)                  gAGCCTCTCGAGCGTGGTTTCGGCCATACCCTGGGCAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGAc                                                                                                                            <  5:56339/147‑1 (MQ=255)                    gCCTCTCGAGCGTGTTTTAGGCCATCCCCTGGGCAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTaa                                                                                                                        <  3:198327/149‑1 (MQ=255)                      ctctCGAGCGTGGTTTCGGCCATACCCTGGGCAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAAtt                                                                                                                      >  6:173700/1‑149 (MQ=255)                        ctcGAGCGTGGTTTCGGCCATACCCTGGGCAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTg                                                                                                                     >  3:143580/1‑148 (MQ=255)                          cGAGCGTGGTTTCGGCCATACCCTGGGCAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGgt                                                                                                                                        <  6:129643/127‑1 (MQ=255)                          cGAGCGTGGTTTCGGCCATACCCTGGGCAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGgt                                                                                                                                        >  5:129643/1‑127 (MQ=255)                                     tCGGCCATACCCTGGGCAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGaa                                                                                                        <  6:350422/148‑1 (MQ=255)                                       ggCCATACCCTGGGCAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGGAGTAGTCGAGGCCGAGATCGATGGCGTACTCCTTGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAAcc                                                                                                      <  7:14601/148‑1 (MQ=255)                                         ccATACCCTGGGCAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGtt                                                                                                                                     <  2:291596/115‑1 (MQ=255)                                           aTACCCTGGGCAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGaaa                                                                                                 <  6:170172/149‑1 (MQ=255)                                           aTACCCTGGGCAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGaaa                                                                                                 <  4:143580/149‑1 (MQ=255)                                            ttcccTGGGGAACGCGCTGCGCCGCATCCTTTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGTCCTAGATCGATGGCGTACTCCATGAGTACTCAGCGATCGAAGGTGTTCAGGAAGACGTAATTTAAATCCTTTTGAACCTGAAAg                                                                                                <  7:302107/147‑1 (MQ=255)                                            tACCCTGGGCAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAg                                                                                                <  3:129905/149‑1 (MQ=255)                                               ccTGGGCAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGtc                                                                                             >  3:122088/1‑149 (MQ=255)                                               ccTGGGCAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGtc                                                                                             >  4:194594/1‑149 (MQ=255)                                                               cgccgcATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCa                                                                             <  7:87954/149‑1 (MQ=255)                                                               cgccgcATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCa                                                                             >  5:350033/1‑149 (MQ=255)                                                                    cATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTc                                                                        <  8:226618/149‑1 (MQ=255)                                                                        cTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGa                                                                    <  3:304293/149‑1 (MQ=255)                                                                        cTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGa                                                                    <  3:299334/149‑1 (MQ=255)                                                                             gtCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGaa                                                                <  1:79611/148‑1 (MQ=255)                                                                             gtCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAg                                                               >  2:102418/1‑149 (MQ=255)                                                                                cgccctGCCTCGCCGTGCAGTACGCGAGGCCGCCATCGATGGCGTACTCCATCAGTACTCCGCGATCGAAGGGGTCCACGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTa                                                            <  4:278861/144‑1 (MQ=255)                                                                                   cATTCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACTTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTACg                                                          <  7:131141/148‑1 (MQ=255)                                                                                   cATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTTCTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTACGc                                                         >  8:269928/1‑149 (MQ=255)                                                                                        cTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTACGCTGAcc                                                    <  2:212388/149‑1 (MQ=255)                                                                                        cTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTACGCTGAcc                                                    <  3:194594/149‑1 (MQ=255)                                                                                           gCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTACGCTGACCTTg                                                 <  4:122088/149‑1 (MQ=255)                                                                                             tgtgCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGtt                                                                                                           >  5:254939/1‑89 (MQ=255)                                                                                             tgtgCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGtt                                                                                                           <  6:254939/89‑1 (MQ=255)                                                                                             tgtgCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGtc                                                                                             >  1:63319/1‑103 (MQ=255)                                                                                             tgtgCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGtc                                                                                             <  2:63319/103‑1 (MQ=255)                                                                                                      gtCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTACGCTGACCTTGTCGAAAAAggg                                      <  7:263843/149‑1 (MQ=255)                                                                                                         gAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGc                                                                              <  8:205250/106‑1 (MQ=255)                                                                                                         gAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGc                                                                              >  7:205250/1‑106 (MQ=255)                                                                                                              cGAGATCGATGGCGTACTCCATGAGTACTCCGcgatctcggcctcgactactgcacagccaggcatggaggacaacaggatgcggcgcagcgcgttgcccagggtatggccgaaaccacgctcgagaggctcgagcgtaattttggcgc                              <  7:295829‑M2/149‑118 (MQ=255)                                                                                                              cGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTACGCTGACCTTGTCGAAAAAGGGTTCggggg                              >  3:127480/1‑149 (MQ=255)                                                                                                               gagaTCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTc                                                                        <  8:3536/106‑1 (MQ=255)                                                                                                               gagaTCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTc                                                                        >  7:3536/1‑106 (MQ=255)                                                                                                                 gaTCGATGGCGTACTCCATGAGTACTCCGcgatctcggcctcgactactgcacagccaggcatggaggac                                                                                                          <  2:165350‑M2/70‑42 (MQ=255)                                                                                                                 gaTCGATGGCGTACTCCATGAGTACTCCGcgatctcggcctcgactactgcacagccaggcatggaggac                                                                                                          >  1:165350‑M2/1‑29 (MQ=255)                                                                                                                   tCGATGGCGTTCTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTACGCTGACCTTGTCGAAAAAGGGTTCGGGggtggt                          <  7:269928/148‑1 (MQ=255)                                                                                                                       tGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTACGCTGACCTTGTCGAAAAAGGGTTCGGGGGTGGTTAcc                      >  8:39625/1‑148 (MQ=255)                                                                                                                       tGGCGTACTCCATGAGTACGCCAtcgatctcggcctcgactactgcacagccaggcatggaggacaacaggatgcggcgcaccgcgttgccaagggtatggccgaaaccacgctcgagaggctcgagcgtaattttggcgcgggtcgga                     <  8:306591‑M2/149‑127 (MQ=255)                                                                                                                             aCTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTACGCTGACCTTGTCGAAAAAGGGTTCgg                                 <  3:320858/131‑1 (MQ=255)                                                                                                                             aCTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTACGCTGACCTTGTCGAAAAAGGGTTCgg                                 >  4:320858/1‑131 (MQ=255)                                                                                                                              cTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTACGCTGACCTTGTCGAAAAAGGGTTCGGGGCTGGATACCGCTGCCGa              >  8:232137/1‑149 (MQ=255)                                                                                                                               tCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTACGCTGACCTTGTCGAAAAAGGGTTCGGGGGTGGTTACCGCTGCCGa              >  6:70054/1‑148 (MQ=255)                                                                                                                                 cATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGtt                                                                                                           <  6:64972/53‑1 (MQ=255)                                                                                                                                 cATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGtt                                                                                                           >  5:64972/1‑53 (MQ=255)                                                                                                                                 cATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTACGCTGACCTTGTCGAAAAAgg                                       <  6:329935/121‑1 (MQ=255)                                                                                                                                 cATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTACGCTGACCTTGTCGAAAAAgg                                       >  5:329935/1‑121 (MQ=255)                                                                                                                                 cATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTACGCTGACCTTGTCGAAAAAGTGTTCGGGGGTGGTGAc                       >  7:128077/1‑137 (MQ=255)                                                                                                                                 cATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTAAGCTGACCTTGTCGAAAAAGGGTTCGGGGGTGGTTACCGCTGACGttat           >  3:258956/1‑149 (MQ=255)                                                                                                                                      gTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTACGCTGACCTTGTCGAAAAAGGGTTCGGGGGTGGTTACCGCTGCCGATATTCAGc      <  6:350033/149‑1 (MQ=255)                                                                                                                                          tCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTACGCTGACCTTGTCGAAAAAGGGTTCGGGGGTGGTTACCGCTGCCGATATTCAGCTGGa  >  5:292929/1‑149 (MQ=255)                                                                                                                                             |                                                                                                                                                  GCGCCAAAATTACGCTCGAGCCTCTCGAGCGTGGTTTCGGCCATACCCTGGGCAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTACGCTGACCTTGTCGAAAAAGGGTTCGGGGGTGGTTACCGCTGCCGATATTCAGCTGGA  >  NC_002947/562985‑563270

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.