New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3394007 =	48 (0.890)	4 (0.080)	4/248	NT	8.2%	coding (400/900 nt)	PP_2997	protein CnmA
	?	NC_002947	3394035 =	44 (0.850)					coding (372/900 nt)	PP_2997	protein CnmA

CCCAGTCCTGCTCGAACAGCACCTGTTGATACATCCCCCCGCCCAACCAGGGCACGAAGCCGATGGCCAGGTCCGCTTCGCCCGATTCCAGCGCGCTCTCGGTATTGCCGTCGATCCGCGCCGCCTCCAGGCGGATGCCCGGCGCATGGCTGCGCAGATGGTTGAGGATGCTGGGCAGCAAGGTGATGTGGCTGGCATCGCTGACACACAGGCGAAAACGCCGCTGCGCTGTGGCGGCGATGAACTGCGGCTCCCAGGCGGTCAGCCGGCGCAGCGATTCCAGCACCTCGCGG  >  NC_002947/3393890‑3394182                                                                                                                                                  |                                                                                                                                                    cccAGTCCTGCTCGAACAGCACCTGTTGATACATCCCCCCGCCCAACCAGGGCACGAAGCCGATGGCCAGGTCCGCTTCGCCCGATTCCAGCGCGCTCTCGGTATTGCCGTCGATCCGCGCCGCCTCCAGGCGGATGCCCGGCGCATgg                                                                                                                                                  >  5:317413/1‑149 (MQ=255) cccAGTCCTGCTCGAACAGCACCTGTTGATACATCCCCCCGCCCAACCAGGGCACGAAGCCGATGGCCAGGTCCGCTTCGCCCGATTCCAGCGCGCTCTCGGTATTGCCGTCGATCCGCGCCGCCTCCAGGCGGATGCCCGGCGCATgg                                                                                                                                                  <  6:53930/149‑1 (MQ=255) cccAGTCCTGCTCGAACAGCACCTGTTGATACATCCCCCCGCCCAACCAGGGCACGAAGCCGATGGCCAGGTCCGCTTCGCCCGATTCCAGCGCGCTCTCGGTATTGCCGTCGATCCGCGCCGCCTCCAGGCGGATGCCCGGCGCATgg                                                                                                                                                  <  3:112366/149‑1 (MQ=255)         ggagccgcagttcatcgccgccacagcgcagcggcgttttcgcctgtgtgtcagcgatgccagccacatcaccttgctgcccagcatcctcaaccatctgcgcagccatGCGCCGCCTCCAGGCGGATGCCCGGCGCATGGCTgcgc                                                                                                                                            >  6:36709‑M1/110‑147 (MQ=255)              gAACAGCACCTGTTGATACATCCCCCCGCCCAACCAGGGCACGAAGCCGATGGCCAGGTCCGCTTCGCCCGATTCCAGCGCGCTCTCGGTATTGCCGTCGATCCGCGCCGCCTCCAGGCGGATGCCCGGCGCATGGCTGCGCAGATgg                                                                                                                                      <  8:156908/148‑1 (MQ=255)                  aGCACCTGTTGATACATCCCCCCGCCCAACCAGGGCACGAAGCCGATGGCCAGGTCCGCTTCGCCCGATTCCAGCGCGCTCTCGGTATTGCCGTCGATCCGCGCCGCCTCCAGGCGGATGCCCGGCGCATGGCTGCGCAGATGGTTGAg                                                                                                                                 <  1:96519/149‑1 (MQ=255)                          ttGATACATCCCCCCGCCCAACCAGGGCACGAAGCCGATGGCCAGGTCCGCTTCGCCCGATTCCAGCGCGCTCTCGGTATTGCCGTCGATCCGCGCCGCCTCCAGGCGGATGCCCGGCGCATGGCTGCGCAGATGGTTGAGGATGCTgg                                                                                                                         >  5:292165/1‑149 (MQ=255)                           tGATACATCCCCCCGCCCAACCAGGGCACGAAGCCGATGGCCAGGTCCGCTTCGCCCGATTCCAGCGCGCTCTCGGTATTGCCGTCGATCCGCGCCGCCTCCAGGCGGATGCCCGGCGCATGGCTGCGCAGATGGTTGAGGATGCTgg                                                                                                                         <  8:269556/148‑1 (MQ=255)                             aTACATCCCCCCGCCCAACCAGGGCACGAAGCCGATGGCCAGGTCCGCTTCGCCCGATTCCAGCGCGCTCTCGGTATTGCCGTCGATCCGCGCCGCCTCCAGGCGGATGCCCGGCGCATGGCTGCGCAGATGGTTGAGGATGCTGGgca                                                                                                                      <  3:98812/149‑1 (MQ=255)                               aCATCCCCCCGCCCAACCAGGGCACGAAGCCGATGGCCAGGTCCGCTTCGCCCGATTCCAGCGCGCTCTCGGTATTGCCGTCGATCCGCGCCGCCTCCAGGCGGATGCCCGGCGCATGGCTGCGCAGATGGTTGAGGATGCTGGgcag                                                                                                                     >  7:315301/1‑148 (MQ=255)                                cATCCCCCCGCCCAACCAGGGCACGAAGCCGATGGCCAGGTCCGCTTCGCCCGATTCCAGCGCGCTCTCGGTATTGCCGTCGATCCGCGCCGCCTCCAGGCGGATGCCCGGCGCATGGCTGCGCAGATGGTTGAGGATGCTGGgcagc                                                                                                                    >  5:317214/1‑148 (MQ=255)                                 aTCCCCCCGCCCAACCAGGGCACGAAGCCGATGGCCAGGTCCGCTTCGCCCGATTCCAGCGCGCTCTCGGTATTGCCGTCGATCCGCGCCGCCTCCAGGCGGATGCCCGGCGCATGGCTGCGCAGATGGTTGa                                                                                                                                  <  3:304787/133‑1 (MQ=255)                                 aTCCCCCCGCCCAACCAGGGCACGAAGCCGATGGCCAGGTCCGCTTCGCCCGATTCCAGCGCGCTCTCGGTATTGCCGTCGATCCGCGCCGCCACCAGGCGGATGCCCGGCGCATCGCTGCGCAGATGCTTGa                                                                                                                                  >  4:304787/1‑133 (MQ=255)                                  tCCCCCCGCCCAACCAGGGCACGAAGCCGATGGCCAGGTCCGCTTCGCCCGATTCCAGCGCGCTCTCGGTATTGCCGTCGATCCGCGCCGCCTCCAGGCGGATGCCCGGCGCATGGCTGCGCAGATGGTTGAGGATGCTGGGCAGCAAg                                                                                                                 <  6:317214/149‑1 (MQ=255)                                   ccccccGCCCAACCAGGGCACGAAGCCGATGGCCAGGTCCGCTTCGCCCGATTCCAGCGCGCTCTCGGTATTGCCGTCGATCCGCGCCGCCTCCAGGCGGATGCCCGGCGCATGGCTGCGCAGATGGTTGAGGATGCTGGGCAGCAAgg                                                                                                                <  2:160184/149‑1 (MQ=255)                                    cccccGCCCAACCAGGGCACGAAGCCGATGGCCAGGTCCGCTTCGCCCGATTCCAGCGCGCTCTCGGTATTGCCGTCGATCCGCGCCGCCTCCAGGCGGATGCCCGGCGCATGGCTGCGCAGATGGTTGAGGATGCTGGGCAGCAAGGt                                                                                                               >  3:196334/1‑149 (MQ=255)                                     ccccGCCCAACCAGGGCACGAAGCCGATGGCCAGGTCCGCTTCGCCCGATTCCAGCGCGCTCTCGGTATTGCCGTCGATCCGCGCCGCCTCCAGGCGGATGCCCGGCGCATGGCTGCGCAGATGGTTGAGGATGCTGGGCAGCAAGGt                                                                                                               >  4:229649/1‑148 (MQ=255)                                      cccGCCCAACCAGGGCACGAAGCCGATGGCCAGGTCCGCTTCGCCCGATTCCAGCGCGCTCTCGGTATTGCCGTCGATCCGCGCCGCCTCCAGGCGGATGCCCGGCGCATGGCTGCGCAGATGGTTGAGGATGCTGGGCAGCAAGGTGa                                                                                                             >  2:78557/1‑149 (MQ=255)                                       ccGCCCAACCAGGGCACGAAGCCGATGGCCAGGTCCGCTTCGCCCGATTCCAGCGCGCTCTCGGTATTGCCGTCGATCCGCGCCGCCTCCAGGCGGATGCCCGGCGCATGGCTGCGCAGATGGTTGAGGATGCTGGGCAGCAAGGTGAt                                                                                                            <  6:256384/149‑1 (MQ=255)                                         gCCCAACCAGGGCACGAAGCCGATGGCCAGGTCCGCTTCGCCCGATTCCAGCGCGCTCTCGGTATTGCCGTCGATCCGCGCCGCCTCCAGGCGGATGCCCGGCGCATGGCTGCGCAGATGGTTGAGGATGCTGGGCAGCAAGGTGAtgt                                                                                                          <  6:318853/149‑1 (MQ=255)                                          cccAACCAGGGCACGAAGCCGATGGCCAGGTCCGCTTCGCCCGATTCCAGCGCGCTCTCGGTATTGCCGTCGATCCGCGCCGCCTCCAGCCGGATGCCCGGCGCATGGCTGCGCAGATGGTTGAGGATGCTGGGCAGCAAGGTGAtgtg                                                                                                         >  5:200976/1‑149 (MQ=255)                                            cAACCCGCGCACGAAGCCGATGGCCAGGTCCGCTTCGCCCGATTCCTGCGCGCTCTCGGTATTGCCGTCGATCCGCGCCGCCTCCAGGCGGATGCCCGGCTCATGGCTGCGCAGATGGTTGAGGATGCTGGGCAGCAAGGTGATGtggc                                                                                                       <  8:318026/149‑1 (MQ=255)                                             ttttcgcctgtgtgtcagcgatgccagccacatcaccttgctgcccagcatcctcaaccatctgcgcagccatGCGCCGCCTCCAGGCGGATGCCCGGCGCAt                                                                                                                                                    <  5:68643‑M1/30‑1 (MQ=255)                                             ttttcgcctgtgtgtcagcgatgccagccacatcaccttgctgcccagcatcctcaaccatctgcgcagccatGCGCCGCCTCCAGGCGGATGCCCGGCGCAt                                                                                                                                                    >  6:68643‑M1/74‑103 (MQ=255)                                               ccAGGGCACGAAGCCGATGGCCAGGTCCGCTTCGCCCGATTCCAGCGCGCTCTCGGTATTGCCGTCGATCCGCGCCGCCTCCAGGCGGATGCCCGGCGCATGGCTGCGCAGATGGTTGAGGATGCTGGGCAGCAAGGTGATGtggctgg                                                                                                    >  8:82588/1‑149 (MQ=255)                                                  gggCACGAAGCCGATGGCCAGGTCCGCTTCGCCCGATTCCAGCGCGCTCTCGGTATTGCCGTCGATCCGCGCCGCCTCCAGGCGGATGCCCGGCGCATGGCTGCGCAGATGGTTGAGGATGCTGGgcagc                                                                                                                    >  3:325740/1‑130 (MQ=255)                                                  gggCACGAAGCCGATGGCCAGGTCCGCTTCGCCCGATTCCAGCGCGCTCTCGGTATTGCCGTCGATCCGCGCCGCCTCCAGGCGGATGCCCGGCGCATGGCTGCGCAGATGGTTGAGGATGCTGGgcagc                                                                                                                    <  4:325740/130‑1 (MQ=255)                                                     cACGAAGCCGATGGCCAGGTCCGCTTCGCCCGATTCCAGCGCGCTCTCGGTATTGCCGTCGATCCGCGCCGCCTCCAGGCGGATGCCCGGCGCATGGCTGCGCAGATGGTTGAGGATGCTGGGCAGCAAGGTGATGTGGCTGGCATCGc                                                                                              >  6:310294/1‑149 (MQ=255)                                                        gAAGCCGATGGCCAGGTCCGCTTCGCCCGATTCCAGCGCGCTCTCGGTATTGCCGTCGATCCGCGCCGCCTCCAGGCGGATGCCCGGCGCATGGCTGCGCAGATGGTTGAGGATGCTGGGCAGCAAGGTGATGTGGCTGGCATCGCTGa                                                                                           <  5:310294/149‑1 (MQ=255)                                                        gAAGCCGATGGCCAGGTCCGCTTCGCCCGATTCCAGCGCGCTCTCGGTATTGCCGTCGATCCGCGCCGCCTCCAGGCGGATGCCCGGCGCATGGCTGCGCAGATGGTTGAGGATGCTGGGCAGCAAGGTGATGTGGCTGGCATCGCTGa                                                                                           <  2:106735/149‑1 (MQ=255)                                                        gAAGCCGATGGCCAGGTCCGCTTCGCCCGATTCCAGCGCGCTCTCGGTATTGCCGTCGATCCGCGCCGCCTCCAGGCGGATGCCCGGCGCATGGCTGCGCAGATGGTTGAGGATGCTGGGCAGCAAGGTGATGTGGCTGGCATCGCTGa                                                                                           <  3:229649/149‑1 (MQ=255)                                                             cGATGGCCAGGTCCGCTTCGCCCGATTCCAGCGCGCTCTCGGTATTGCCGTCGATCCGCGCCGCCTCCAGGCGGATGCCCGGCGCATGGCTGCGCAGATGGTTGAGGATGCTGGGCAGCAAGGTGATGTGGCTGGCATCGCTGacacac                                                                                      <  6:317413/149‑1 (MQ=255)                                                                   ccAGGTCCGCTTCGCCCGATTCCAGCGCGCTCTCGGTATTGCCGTCGATCCGCGCCGCCTCCAGGCGGATGCCCGGCGCATGGCTGCGCAGATGGTTGAGGATGCTGGGCAGCAAGGTGATGTGGCTGGCATCGCTGACACACAGGCg                                                                                 >  2:158440/1‑148 (MQ=255)                                                                     aGGTCCGCTTCGCCCGATTCCAGCGCGCTCTCGGTATTGCCGTCGATCCGCGCCGCCTCCAGGCGGATGCCCGGCGCATGGCTGCGCAGATGGTTGAGGATGCTGGGCAGCAAGGTGATGTGGCTGGCATCGCTGACACACAGGCGaaa                                                                              <  8:315301/149‑1 (MQ=255)                                                                                gCCCGATTCCAGCGCGCTCTCGGTATTGCCGTCGATCCGCGCCGCCTCCAGGCGGATGCCCGGCGCATGGCTGCGCAGATGGTTGAGGATGCTGGGCAGCAAGGTGATGTGGCTGGCATCGCTGACACACAGGCGAAAACGCcgctgcg                                                                   >  4:111102/1‑149 (MQ=255)                                                                                          aGCGCGCTCTCGGTATTGCCGTCGATCCGCGCCGCCTCCAGGCGGATGCCCGGCGCATGGCTGCGCAGATGGTTGAGGATGCTGGGCAGCAAGGTGATGTGGCTGGCATCGCTGACACACAGGCGAAAACGCCGCTGCGCTGTggcggc                                                         >  8:279735/1‑149 (MQ=255)                                                                                                    cGGTATTGCCGTCGATCCGCGCCGCCTCCAGGCGGATGCCCGGCGCATGGCTGCGCAGATGGTTGAGGATGCTGGGCAGCAAGGTGATGTGGCTGGCATCGCTGACACACAGGCGAAAACGCCGCTGCGCTGTGGCGGCGATGAACTGc                                               <  3:111102/149‑1 (MQ=255)                                                                                                    cGGTATTGCCGTCGATCCGCGCCGCCTCCAGGCGGATGCCCGGCGCATGGCTGCGCAGATGGTTGAGGATGCTGGGCAGCAAGGTGATGTGGCTGGCATCGCTGACACACAGGCGAAAACGCCGCTGCGCTGTGGCGGCGATGAACTGc                                               >  6:305494/1‑149 (MQ=255)                                                                                                     ggTATTGCCGTCGATCCGCGCCGCCTCCAGGCGGATGCCCGGCGCATGGCTGCGCAGATGGTTGAGGATGCTGGGCAGCAAGGTGATGTGGCTGGCATCGCTGACACACAGGCGAAAACGCCGCTGCGCTGTGGCGGCGATGAACTg                                                <  7:279735/147‑1 (MQ=255)                                                                                                      gTATTGCCGTCGATCCGCGCCGCCTCCAGGCGGATGCCCGGCGCATGGCTGCGCAGATGGTTGAGGATGCTGGGCAGCAAGGTGATGTGGCTGGCATCGCTGACACACAGGCGAAAACGCCGCTGCGCTGTGGCGGCGATGAACTGCgg                                             <  1:78557/149‑1 (MQ=255)                                                                                                       tATTGCCGTCGATCCGCGCCGCCTCCAGGCGGATGCCCGGCGCATGGCTGCGCAGATGGTTGAGGATGCTGGGCAGCAAGGTGATGTGGCTGGCATCGCTGACACACAGGCGAAAACGCCGCTGCGCTGTGGCGGCGATGAACTGCGGc                                            >  8:250158/1‑149 (MQ=255)                                                                                                       tATTGCCGTCGATCCGCGCCGCCTCCAGGCGGATGCCCGGCGCATGGCTGCGCAGATGGTTGAGGATGCTGGGCAGCAAGGTGATGTGGCTGGCATCGCTGACACACAGGCGAAAACGCCGCTGCGCTGTGGCGGCGATGAACTGCGGc                                            <  6:292165/149‑1 (MQ=255)                                                                                                            gcgcagccatgcgccgggcatccgcctggaggcggcgcATGGCTGCGCAGATGGTTGAGGATGCTGGGCAGCAAGGTGATGTGGCTGGCATCGCTGACACACAGGCGAAAACGCCGCTGCGCTGTGGCGGCGATGAACTGCGGCTcc                                         >  6:36709‑M2/39‑147 (MQ=255)                                                                                                              gTCGATCCGCGCCGCCTCCAGGCGGATGCCCGGCGCATGGCTGCGCAGATGGTTGAGGATGCTGGGCAGCAAGGTGATGTGGCTGGCATCGCTGACACACAGGCGAAAACGCCGCTGCGCTGTGGCGGCGATGAACTGCGGCTCCCAgg                                     <  6:200976/149‑1 (MQ=255)                                                                                                                  aTCCGCGCCGCCTCCAGGCGGATGCCCGGCGCATGGCTGCGCAGATGGTTGAGGATGCTGGGCAGCAAGGTGATGTGGCTGGCATCGCTGACACACAGGCGAAAACGCCGCTGCGCTGTGGCGGCGATGAACTGCGGCTCCCAGGCGGt                                 <  7:82588/149‑1 (MQ=255)                                                                                                                    ccGCGCCGCCTCCAGGCGGATGCCCGGCGCATGGCTGCGCAGATGGTTGAGGATGCTGGGCAGCAAGGTGATGTGGCTGGCATCGCTGACACACAGGCGAAAACGCCGCTGCGCTGTGGCGGCGATGAACTGCGGCTCCCAGGCGGt                                 >  4:265531/1‑147 (MQ=255)                                                                                                                    atgcgccgggcatccgcctggaggcggcgcATGGCTGCGCAGATGGTTGAGGATGCTGGGCAGCAAGGTGATGTGGCTGGCATCGCTGACACACAGGCGaaaa                                                                             >  6:68643‑M2/31‑103 (MQ=255)                                                                                                                    atgcgccgggcatccgcctggaggcggcgcATGGCTGCGCAGATGGTTGAGGATGCTGGGCAGCAAGGTGATGTGGCTGGCATCGCTGACACACAGGCGaaaa                                                                             <  5:68643‑M2/73‑1 (MQ=255)                                                                                                                      GCGCCGCCTCCAGGCGGATGCCCGGCGCATGGCTGCGCAGATGGTTGAGGATGCTGGGCAGCAAGGTGATGTGGCTGGCATCGCTGACACACAGGCGAAAACGCCGCTGCGCTGTGGCGGCGATGAACTGCGGCTCCCAGGCGGTCAGc                             <  2:18816‑M1/149‑1 (MQ=255)                                                                                                                            ccTCCAGGCGGATGCCCGGCGCATGGCTGCGCAGATGGTTGAGGATGCTGGGCAGCAAGGTGATGTGGCTGGCATCGCTGACACACAGGCGAAAACGCCGCTGCGCTGTGGCGGCGATGAACTGCGGCTCCCAGGCGGTCAGCCGgcgc                       <  7:250158/149‑1 (MQ=255)                                                                                                                            ccTCCAGGCGGATGCCCGGCGCATGGCTGCGCAGATGGTTGAGGATGCTGGGCAGCAAGGTGATGTGGCTGGCATCGCTGACACACAGGCGAAAACGCCGCTGCGCTGTGGCGGCGATGAACTGCGGCTCCCAGGCGGTCAGCCGgcgc                       <  1:158440/149‑1 (MQ=255)                                                                                                                             cTCCAGGCGGATGCCCGGCGCATGGCTGCGCAGATGGTTGAGGATGCTGGGCAGCAAGGTGATGTGGCTGGCATCGCTGACACACAGGCGAAAACGCCGCTGCGCTGTGGCGGCGATGAACTGCGGCTCCCAGGCGGTCAGCCGgcg                        >  6:248493/1‑147 (MQ=255)                                                                                                                                cAGGCGGATGCCCGGCGCATGGCTGCGCAGATGGTTGAGGATGCTGGGCAGCAAGGTGATGTGGCTGGCATCGCTGACACACAGGCGAAAACGCCGCTGCGCTGTGGCGGCGATGAACTGCGGCTCCCAGGCGGTCAGCCGGCGCAg                     >  7:240394/1‑147 (MQ=255)                                                                                                                                cAGGCGGATGCCCGGCGCATGGCTGCGCAGATGGTTGAGGATGCTGGGCAGCAAGGTGATGTGGCTGGCATCGCTGACACACAGGCGAAAACGCCGCTGCGCTGTGGCGGCGATGAACTGCGGCTCCCAGGCGGTCAGCCGGCGCAg                     <  8:240394/147‑1 (MQ=255)                                                                                                                                  cgcctggaggcggcgcATGGCTGCGCAGATGGTTGAGGATGCTGGGCAGCAAGGTGATGTGGCTGGCATCGCTGACACACAGGCGAAAACGCCGCTGCGCTGTGGCGGCGATGAACTGCGGCTCCCAGGCGGTCAGCCGGCGCAGCGAt                 <  5:36709‑M2/133‑1 (MQ=255)                                                                                                                                       aTGCCCGGCGCATGGCTGCGCAGATGGTTGAGGATGCTGGGCAGCAAGGTGATGTGGCTGGCATCGCTGACACACAGGCGAAAACGCCGCTGCGCTGTGGCGGCGATGAACTGCGGCTCCCAGGCGGTCAGCCGGCGCAGCGATTCCAg            <  5:248493/149‑1 (MQ=255)                                                                                                                                         gCCCGGCGCATGGCTGCGCAGATGGTTGAGGATGCTGGGCAGCAAGGTGATGTGGCTGGCATCGCTGACACACAGGCGAAAACGCCGCTGCGCTGTGGCGGCGATGAACTGCGGCTCCCAGGCGGTCAGCCGGCGCAGCGATTCCAGCa          >  4:288877/1‑149 (MQ=255)                                                                                                                                           ccGGCGCATGGCTGCGCAGATGGTTGAGGATGCTGGGCAGCAAGGTGATGTGGCTGGCATCGCTGACACACAGGCGAAAACGCCGCTGCGCTGTGGCGGCGATGAACTGCGGCTCCCAGGCGGTCAGCCGGCGCAg                     >  2:252918/1‑136 (MQ=255)                                                                                                                                           ccGGCGCATGGCTGCGCAGATGGTTGAGGATGCTGGGCAGCAAGGTGATGTGGCTGGCATCGCTGACACACAGGCGAAAACGCCGCTGCGCTGTGGCGGCGATGAACTGCGGCTCCCAGGCGGTCAGCCGGCGCAg                     <  1:252918/136‑1 (MQ=255)                                                                                                                                                  aTGGCTGCGCAGATGGTTGAGGATGCTGGGCAGCAAGGTGATGTGGCTGGCATCGCTGACACACAGGCGAAAACGCCGCTGCGCTGTGGCGGCGATGAACTGCGGCTCCCAGGCGGTCAGCCGGCGCAGCGATTCCAGCACCTCGCgg  >  3:146247/1‑148 (MQ=255)                                                                                                                                                  |                                                                                                                                                    CCCAGTCCTGCTCGAACAGCACCTGTTGATACATCCCCCCGCCCAACCAGGGCACGAAGCCGATGGCCAGGTCCGCTTCGCCCGATTCCAGCGCGCTCTCGGTATTGCCGTCGATCCGCGCCGCCTCCAGGCGGATGCCCGGCGCATGGCTGCGCAGATGGTTGAGGATGCTGGGCAGCAAGGTGATGTGGCTGGCATCGCTGACACACAGGCGAAAACGCCGCTGCGCTGTGGCGGCGATGAACTGCGGCTCCCAGGCGGTCAGCCGGCGCAGCGATTCCAGCACCTCGCGG  >  NC_002947/3393890‑3394182

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.