New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4978918	51 (0.940)	8 (0.160)	6/244	NT	13.6%	coding (504/786 nt)	flgG	flagellar basal‑body rod protein FlgG
	?	NC_002947	= 4978941	54 (1.060)					coding (481/786 nt)	flgG	flagellar basal‑body rod protein FlgG

CGTTCAGGCCTGGGGTGCCGACCTGAGGCGCGCCACTGGCGGCGGTCTCGAGGAACAGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTT‑GATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCG‑GCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTAGCCGTTGTCAGTGACGATCTGGCCGTCGGAGTTCAGGTGGAAGGTACCGTCACGGGTATACGACACG  >  NC_002947/4978794‑4979089                                                                                                                                                      |                                                                                                                                                     cGTTCAGGCCTGGGGTGCCGACCTGAGGCGCGCCACTGGCGGCGGTCTCGAGGAACAGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTT‑GATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCG‑GCGGTg                                                                                                                                                     >  7:96161‑M2/1‑148 (MQ=255)  gTTCAGGCCTGGGGTGCCGACCTGAGGCGCGCCACTGGCGGCGGTCTCGAGGAACAGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTT‑GATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCG‑GCGGTgg                                                                                                                                                    >  5:28143‑M2/1‑147 (MQ=255)   ttCAGGCCTGGGGTGCCGACCTGAGGCGCGCCACTGGCGGCGGTCTCGAGGAACAGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTT‑GATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCG‑GCGGTg                                                                                                                                                     <  5:125129‑M2/147‑2 (MQ=255)   ttCAGGCCTGGGGTGCCGACCTGAGGCGCGCCACTGGCGGCGGTCTCGAGGAACAGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTT‑GATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCG‑GCGGTg                                                                                                                                                     >  6:125129‑M2/1‑146 (MQ=255)       ggCCTGGGGTGCCGACCTGAGGCGCGCCACTGGCGGCGGTCTCGAGGAACAGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTT‑GATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCG‑GCGGTggtgatc                                                                                                                                               >  3:18050‑M2/1‑142 (MQ=255)       ggCCTGGGGTGCCGACCTGAGGCGCGCCACTGGCGGCGGTCTCGAGGAACAGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTT‑GATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCG‑GCGGTggtgatc                                                                                                                                               >  5:43494‑M2/1‑142 (MQ=255)       ggCCTGGGGTGCCGACCTGAGGCGCGCCACTGGCGGCGGTCTCGAGGAACAGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTT‑GATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCG‑GCGGTggtgatc                                                                                                                                               >  7:197981‑M2/1‑142 (MQ=255)       ggCCTGGGGTGCCGACCTGAGGCGCGCCACTGGCGGCGGTCTCGAGGAACAGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTT‑GATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCG‑GCGGTggtgatc                                                                                                                                               >  6:152457‑M2/1‑142 (MQ=255)             gggTGCCGACCTGAGGCGCGCCACTGGCGGCGGTCTCGAGGAACAGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTT‑GATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCG‑GCGGTGGTGATCGACACg                                                                                                                                         >  1:294543/1‑149 (MQ=255)             gggTGCCGACCTGAGGCGCGCCACTGGCGGCGGTCTCGAGGAACAGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTT‑GATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCG‑GCGGTGGTGATCGACACg                                                                                                                                         >  2:39344/1‑149 (MQ=255)              ggTGCCGACCTGAGGCGCGCCACTGGCGGCGGTCTCGAGGAACAGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTT‑GATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCG‑GCGGTGGTGATCGACACgg                                                                                                                                        <  3:149444/149‑1 (MQ=255)              ggTGCCGACCTGAGGCGCGCCACTGGCGGCGGTCTCGAGGAACAGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTT‑GATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCG‑GCGGTGGTGATCGACACgg                                                                                                                                        <  6:154340/149‑1 (MQ=255)                   cGACCTGAGGCGCGCCACTGGCGGCGGTCTCGAGGAACAGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTT‑GATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCG‑GCGGTGGTGATCGACACGGTGCCg                                                                                                                                   >  5:90153/1‑149 (MQ=255)                       cTGAGGCGCGCCACTGGCGGCGGTCTCGAGGAACAGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTT‑GATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCG‑GCGGTgg                                                                                                                                                    >  2:313318‑M2/1‑126 (MQ=255)                       cTGAGGCGCGCCACTGGCGGCGGTCTCGAGGAACAGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTT‑GATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCG‑GCGGTgg                                                                                                                                                    <  1:313318‑M2/128‑3 (MQ=255)                       cTGAGGCGCGCCACTGGCGGCGGTCTCGAGGAACAGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTT‑GATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCG‑GCGGTGGTGATCGACACGGTGCCGTCCt                                                                                                                               <  6:284278/149‑1 (MQ=255)                            gcgcgcCACTGGCGGCGGTCTCGAGGAACAGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTT‑GATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCG‑GCGGTGGTGATCGACACGGTGCCGTCCTGGcc                                                                                                                           >  1:293201/1‑148 (MQ=255)                                   aCTGGCGGCGGTCTCGAGGAACAGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTT‑GATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCG‑GCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGa                                                                                                                   <  5:103500/149‑1 (MQ=255)                                    cTGGCGGCGGTCTCGAGGAACAGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTT‑GATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCG‑GCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGaa                                                                                                                  <  4:1434/149‑1 (MQ=255)                                        cggcggTCTCGAGGAACAGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTT‑GATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCGAGCTGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGt                                                                                                               >  1:115339/1‑149 (MQ=255)                                         ggcggTCTCGAGGAACAGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTT‑GATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCG‑GCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCt                                                                                                             >  3:285662/1‑149 (MQ=255)                                               ctcGAGGAACAGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTTGGATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCG‑GCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGcgcg                                                                                                        >  1:76904/1‑149 (MQ=255)                                                tcGAGGAACAGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTT‑GATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCG‑GCGGTGGTGATCGACACGGTGCCGTCCTgg                                                                                                                             >  7:57564/1‑126 (MQ=255)                                                tcGAGGAACAGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTT‑GATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCG‑GCGGTGGTGATCGACACGGTGCCGTCCTgg                                                                                                                             <  8:57564/126‑1 (MQ=255)                                                  gAGGAACAGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTT‑GATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCG‑GCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTc                                                                                                              >  7:49110/1‑139 (MQ=255)                                                  gAGGAACAGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTT‑GATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCG‑GCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTc                                                                                                              <  8:49110/139‑1 (MQ=255)                                                  gAGGAACAGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTT‑GATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCG‑GCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGcgt                                                                                                       <  8:161645/146‑1 (MQ=255)                                                  gAGGAACAGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTT‑GATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCG‑GCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGAGcgtcgt                                                                                                    >  2:51654/1‑149 (MQ=255)                                                     gAACAGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTT‑GATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCG‑GCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAg                                                                                                 <  6:90153/149‑1 (MQ=255)                                                         aGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTT‑GATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCG‑GCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTgcg                                                                                                          <  5:60110/136‑1 (MQ=255)                                                         aGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTT‑GATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCG‑GCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTgcg                                                                                                          >  6:60110/1‑136 (MQ=255)                                                           gTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTT‑GATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCG‑GCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGa                                                                                           <  1:39344/149‑1 (MQ=255)                                                            ttGTCGCCGATCGCCTGCAGGCCGGCCGGGTT‑GATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCG‑GCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGAc                                                                                          <  3:196960/149‑1 (MQ=255)                                                               tCGCCGATCGCCTGCAGGCCGGCCGGGTT‑GATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCG‑GCGGTGCTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAAt                                                                                       >  5:191863/1‑149 (MQ=255)                                                                 gCCGATCGCCTGCAGGCCGGCCGGGTT‑GATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCG‑GCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATgg                                                                                     <  2:76904/149‑1 (MQ=255)                                                                 gCCGATCGCCTGCAGGCCGGCCGGGTT‑GATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCG‑GCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATg                                                                                      <  3:295911/148‑1 (MQ=255)                                                                   cGATCGCCTGCAGGCTGGCCGGGTT‑GATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCG‑GCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATgg                                                                                     >  8:239807/1‑147 (MQ=255)                                                                    gATCGCCTGCAGGCCGGCCGGGTT‑GATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCG‑GCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAg                                                                                  >  1:40290/1‑149 (MQ=255)                                                                                 ccggccggGTT‑GATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCG‑GCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTa                                                                     <  2:21484/149‑1 (MQ=255)                                                                                      cggGTT‑GATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCG‑GCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGcgtcg                                                                                                     >  8:286838/1‑112 (MQ=255)                                                                                      cggGTT‑GATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCG‑GCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGcgtcg                                                                                                     <  7:286838/112‑1 (MQ=255)                                                                                         gTT‑GATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCG‑GCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTAGCCGTTg                                                              >  7:93174/1‑148 (MQ=255)                                                                                         gTT‑GATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCG‑GCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTAGCCGTTGt                                                             <  4:285662/149‑1 (MQ=255)                                                                                             gatgaAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCG‑GCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTAGCCGTTGTCAg                                                          >  2:215603/1‑149 (MQ=255)                                                                                              atgaAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCG‑GCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGcgt                                                                                                       >  2:55017/1‑103 (MQ=255)                                                                                              atgaAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCG‑GCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGcgt                                                                                                       <  1:55017/103‑1 (MQ=255)                                                                                                 aaGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCG‑GCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTAGCCGTTGTCAGTGAc                                                      <  2:293201/149‑1 (MQ=255)                                                                                                          gTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCG‑GCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTAGCCGTTGTCAGTGACGATCTGGcc                                             <  2:40290/149‑1 (MQ=255)                                                                                                           tCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCG‑GCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTAGCCGTTGTCAGTGACGATCTGGCCg                                            >  3:259025/1‑149 (MQ=255)                                                                                                             tGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCG‑GCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTAGCCGTTGTCAGTGACGATCTGGCCGTc                                          >  6:288067/1‑149 (MQ=255)                                                                                                               gATGTTGCCGATCACCTGTGCAGCCGGGTTGCCG‑GCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTAGCCGTTGTCAGTGACGATCTGGCCGTc                                          <  7:239807/147‑1 (MQ=255)                                                                                                                      ccGATCACCTGTGCAGCCGGGTTGCTG‑GCGGTggtgatcggcaacatccagaccgccgacttcatcaacccggccggcctgcaggcgatcggcgacaacctgttcctcgagaccgccgccagtggcgcgcctcaggtcggcaccccagg                                 <  6:141982‑M2/149‑118 (MQ=255)                                                                                                                      ccGATCACCTGTGCAGCCGGGTTGCCG‑GCGGTggtgatcggcaacatccagaccgccgacttcatcaacccggccggcctgcaggcgatcggcgacaacctgttcctcgagaccgccgccagcggcgcgcctcaggtcggcaccccagg                                 <  5:295503‑M2/149‑118 (MQ=255)                                                                                                                       cGATCACCTGTGCAGCCGGGTTGCCG‑GCGGTggtgatcggcaacatccagaccgccgacttcatcaacccggccggcctgcaggcgatcggcgacaacctgttcctcgagaccgccgccagtggcgcgcctcaggtcggcaccccaggc                                <  2:111654‑M2/149‑119 (MQ=255)                                                                                                                       cGATCACCTGTGCAGCCGGGTTGCCG‑GCGGTggtgatcggcaacatccagaccgccgacttcatcaacccggccggcctgcaggcgatcggcgacaacctgttcctcgagaccgccgccagtggcgcgcctcaggtcggcacccc                                    <  2:240505‑M2/145‑115 (MQ=255)                                                                                                                       cGATCACCTGTGCAGCCGGGTTGCCG‑GCGGTggtgatcggcaacatccagaccgccgacttcatcaacccggccggcctgcaggcgatcggcgacaacctgtctcctcgagaccgccgccagtggcgcgcctcaggtcggcacccc                                   >  1:240505‑M2/1‑31 (MQ=255)                                                                                                                       cGATCACCTGTGCAGCCGGGTTGCCG‑GCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTAGACGTTGTCAGTGACGATCTGGCCGTCGGAGTTCAgg                                >  3:41502/1‑149 (MQ=255)                                                                                                                        gATCACCTGTGCAGCCGGGTTGCTG‑GCGGTggtgatcggcaacatccagaccgccgacttcatcaacccggccggcctgcaggcgatcggcgacaacctgttcctcgagaccgccgccagtggcgcgcctcaggtcggcaccccaggcc                               >  5:141982‑M2/1‑30 (MQ=255)                                                                                                                        gATCACCTGTGCAGCCGGGTTGCCG‑GCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTAGCCGTTGTCAGTGACGATCTGGCCGTCGGAGTTCAGGt                               <  4:259025/149‑1 (MQ=255)                                                                                                                             ccTGTGCAGCCGGGTTGCCG‑GCGGTggtgatcggcaacatccagaccgccgacttcatcaacccggccggcctgcaggcgatcggcgacaacctgttcctcgagaccgccgccagtggcgcgcctcaggtcggcaccccaggcctgaac                          <  5:350615‑M2/149‑125 (MQ=255)                                                                                                                             ccTGTGCAGCCGGGTTGCCG‑GCGGTGGTGATCGACACGGTGCCGTCCTGCCCAACGGTGAAGGTCTGCGCGTCGTGAGGCACGACAATGGCAGGCTCAAGGGCGTAGCCGTTGTCAGTGACGATATGGCCGTCGGAGTTCAGGTGGAAg                          >  2:52553/1‑149 (MQ=255)                                                                                                                              cTGTGCAGCCGGGTTGCCG‑GCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGt                                                                                                               >  6:103888/1‑63 (MQ=255)                                                                                                                              cTGTGCAGCCGGGTTGCCG‑GCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGt                                                                                                               <  5:103888/63‑1 (MQ=255)                                                                                                                              cTGTGCAGCCGGGTTGCCG‑GCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTAGCCGTTGTCAGTGACGATCTGGCCGTCGGAGTTCAGGTGGAAgg                         >  1:328053/1‑149 (MQ=255)                                                                                                                                   cAGCCGGGTTGCCG‑GCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTAGCCGTTGTCAGTGACGATCTGGCCGTCGGAGTTCAGGTGGAAGGTACCg                    >  8:287579/1‑149 (MQ=255)                                                                                                                                      ccGGGTTGCCG‑GCGGTggtgatcggcaacatccagaccgccgacttcatcaacccggccggcctgcaggcgatcggcgacaacctgttcctcgagaccgccgccagcggcgcgcctcaggtcggcaccccaggcctgaacggttttggc                 >  6:295503‑M2/1‑16 (MQ=255)                                                                                                                                      ccGGGTTGCCG‑GCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTAGCCGTTGTCAGTGACGATCTGGCCGTCGGAGTTCAGGt                               <  5:155424/135‑1 (MQ=255)                                                                                                                                      ccGGGTTGCCG‑GCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTAGCCGTTGTCAGTGACGATCTGGCCGTCGGAGTTCAGGt                               >  6:155424/1‑135 (MQ=255)                                                                                                                                         ggTTGCCT‑GCGGTGGTGATCGACACGGTGCCGTCCTGGGAAAGGGTGAAGGTGTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTAGCCGTTGTCAGTGTCTATCTGGCCGTCGGAGTTCAGGTGGATGGTACCTTCACgg              <  6:191863/149‑1 (MQ=255)                                                                                                                                         ggTTGCCG‑GCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAATGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTAGCCGTTGTCAGTGACGATCTGGCCGTCGGAGTTCAGGTGGAAGGTACCGTCACgg              <  8:93174/149‑1 (MQ=255)                                                                                                                                         ggTTGCCG‑GCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTAGCCGTTGTCAGTGACGATCTGGCCGTCGGAGTTCAGGTGGAAGGTACCGTCACgg              <  5:288067/149‑1 (MQ=255)                                                                                                                                         ggTTGCCG‑GCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTAGCCGTTGTCAGTGACGATCTGGCCGTCGGAGTTCAGGTGGAAGGTACCGTCACgg              <  2:115339/149‑1 (MQ=255)                                                                                                                                              ccG‑GCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTAGCCGTTGTCAGTGACGATCTGGCCGTCGGAGTTCAGGTGGAAg                          >  6:312588/1‑132 (MQ=255)                                                                                                                                              ccG‑GCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTAGCCGTTGTCAGTGACGATCTGGCCGTCGGAGTTCAGGTGGAAg                          <  5:312588/132‑1 (MQ=255)                                                                                                                                                      tggtgATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTAGCCGTTGTCAGTGACGATCTGGCCGTCGGAGTTCAGGTGGAAGGTACCGTCACGGGTATACGACACg  <  2:6894/149‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                     CGTTCAGGCCTGGGGTGCCGACCTGAGGCGCGCCACTGGCGGCGGTCTCGAGGAACAGGTTGTCGCCGATCGCCTGCAGGCCGGCCGGGTT‑GATGAAGTCGGCGGTCTGGATGTTGCCGATCACCTGTGCAGCCGGGTTGCCG‑GCGGTGGTGATCGACACGGTGCCGTCCTGGCCAACGGTGAAGGTCTGCGCGTCGTTAGGCACGACAATGGCAGGCTCCAGGGCGTAGCCGTTGTCAGTGACGATCTGGCCGTCGGAGTTCAGGTGGAAGGTACCGTCACGGGTATACGACACG  >  NC_002947/4978794‑4979089

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.