New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 532241	76 (1.190)	4 (0.070)	3/240	NT	5.2%	intergenic (+23/‑130)	PP_0439/PP_t01	hypothetical protein/tRNA‑Tyr
	?	NC_002947	= 532271	73 (1.210)					intergenic (+53/‑100)	PP_0439/PP_t01	hypothetical protein/tRNA‑Tyr

CGCTGGCTCAAGGTTGCTCCGGAAAGCGAGCGTTTGCTGGACCAAACGGTGCTCTTGGCTCTTTCCAATGATTTCAAAGACTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/532090‑532241 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcttcCAGTTCTACCACCTGAGTGGTGTTCCCTGTGAAGCGGGCGCCATTCTATCAAGCTATTCGTCAGTTGCAATACCCTGGCAGAAAATAATTTTATGTTTTAAGTCTTTGAAATCATTGGAAAGAGCCAAGAGCACCGTTTGGTCCAG  <  NC_002947/532271‑532126                                                                                                                                                                                                                                                                                                            CGCTGGCTCAAGGTTGCTCCGGAAAGCGAGCGTTTGCTGGACCAAACGGTGCTCTTGGCTCTTTCCAATGATTTCAAAGACTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGC                                                                                                                                                       >  4:224391/1‑149  GCTGGCTCAAGGTTGCTCCGGAAAGCGAGCGTTTGCTGGACCAAACGGTGCTCTTGGCTCTTTCCAATGATTTCAAAGACTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGC                                                                                                                                                       <  1:399020/148‑1                       AAAGCGAGCGTTTGCTGGACCAAACGGTGCTCTTGGCTCTTTCCAATGATTTCAAAGACTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGC                                                                                                                                                       <  4:235336/127‑1                                    GCTGGACCAAACGGTGCTCTTGGCTCTTTCCAATGATTTCAAAGACTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCCAGTTCTACCACCTGAGTGGTGTTCCCTGTG                                                                                                                     >  3:199481/1‑148                                         ACCAAACGGTGCTCTTGGCTCTTTCCAATGATTTCAAAGACTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCCAGTTCTACCACCTGAGTGGTGTTCCCTGTGAAGCGG                                                                                                               <  1:133843/149‑1                                         ACCAAACGGTGCTCTTGGCTCTTTCCAATGATTTCAAAGACTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCCAGTTCTACCACCTGAGTGGTGTTCCCTGTGAAGCGG                                                                                                               <  8:46470/149‑1                                          CCAAACGGTGCTCTTGGCTCTTTCCAATGATTTCAAAGACTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCCAGTTCTACCACCTGAGTGGTGTTCCCTGTGAAGCGGG                                                                                                              <  4:199481/149‑1                                                                                                                                                   CGCTTCGAGTTCTTCCAGCTGAGTGGTGTTCCCTGTGTAGCGGGCGCCATTCTATCAAGCTTTTCGTCAGTTGCAATACCCTGGCAGAAAATAATTTTATGTTTTAAGTCTTTGAAATCATTG                               <  8:89861/123‑1                                                                                                                                                   CGCTTCCAGTTCTACCACCTGAGTGGTGTTCCCTGTGAAGCGGGCGCCATTCTATCAAGCTATTCGTCAGTTGCAATACCCTGGCAGAAAATAATTTTATGTTTTAAGTCTTTGAAATCATTGGA                             <  3:87639/125‑1                                                                                                                                                   CGCTTCCAGTTCTACCACCTGAGTGGTGTTCCCTGTGAAGCGGGCGCCATTCTATCAAGCTATTCGTCAGTTGCAATACCCTGGCAGAAAATAATTTTATGTTTTAAGTCTTTGAAATCATTGGA                             >  4:87639/1‑125                                                                                                                                                   CGCTTCCAGTTCTACCACCTGAGTGGTGTTCCCTGTGAAGCGGGCGCCATTCTATCAAGCTATTCGTCAGTTGCAATACCCTGGCAGAAAATAATTTTATGTTTTAAGTCTTTGAAATCATTG                               >  7:89861/1‑123                                                                                                                                                   CGCTTCCAGTTCTACCACCTGAGTGGTGTTCCCTGTGAAGCGGGCGCCATTCTATCAAGCTATTCGTCAGTTGCAATACCCTGGCAGAAAATAATTTTATGTTTTAAGTCTTTG                                        >  3:284497/1‑114                                                                                                                                                   CGCTTCCAGTTCTACCACCTGAGTGGTGTTCCCTGTGAAGCGGGCGCCATTCTATCAAGCTATTCGTCAGTTGCAATACCCTGGCAGAAAATAATTTTATGTTTTAAGTCTTTG                                        <  4:284497/114‑1                                                                                                                                                      TTCCAGTTCTACCACCTGAGTGGTGTTCCCTGTGAAGCGGGCGCCATTCTATCAAGCTATTCGTCAGTTGCAATACCCTGGCAGAAAATAATTTTATGTTTTAAGTCTTTGAAATCATTGGAAAGAGCCAAGAGCACCGTTTGGTCCAG  >  2:21100/1‑149                                                                                                                                                        CCAGTTCTACCACCTGAGTGGTGTTCCCTGTGAAGCGGGCGCCATTCTATCAAGCTATTCGTCAGTTGCAATACCCTGGCAGAAAATAATTTTATGTTTTAAGTCTTT                                         <  7:387113/108‑1                                                                                                                                                        CCAGTTCTACCACCTGAGTGGTGTTCCCTGTGAAGCGGGCGCCATTCTATCAAGCTATTCGTCAGTTGCAATACCCTGGCAGAAAATAATTTTATGTTTTAAGTCTTT                                         >  8:387113/1‑108                                                                                                                                                                                                                                                                                                            CGCTGGCTCAAGGTTGCTCCGGAAAGCGAGCGTTTGCTGGACCAAACGGTGCTCTTGGCTCTTTCCAATGATTTCAAAGACTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/532090‑532241 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcttcCAGTTCTACCACCTGAGTGGTGTTCCCTGTGAAGCGGGCGCCATTCTATCAAGCTATTCGTCAGTTGCAATACCCTGGCAGAAAATAATTTTATGTTTTAAGTCTTTGAAATCATTGGAAAGAGCCAAGAGCACCGTTTGGTCCAG  <  NC_002947/532271‑532126

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.