BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 532241	76 (1.190)	4 (0.070)	3/240	NT	5.2%	intergenic (+23/‑130)	PP_0439/PP_t01	hypothetical protein/tRNA‑Tyr
*	?	NC_002947	= 532271	73 (1.210)	4 (0.070)	3/240	NT	5.2%	intergenic (+53/‑100)	PP_0439/PP_t01	hypothetical protein/tRNA‑Tyr

Only 100 of 110 total aligned reads displayed.

CTCAAGGTTGCTCCGGAAAGCGAGCGTTTGCTGGACCAAACGGTGCTCTTGGCTCTTTCCAATGATTTCAAAGACTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAGGTGGTAGAACTGGAAGCGGTGTCAAAGCAGCTAAGTTTCAGATTTGATTGAAAAAATTTGAAAAAACGCTTGACACTAGGACGGCAGACAAATAGAATGCCGGCCACATCTGGAGGGATTCCCGAGCGGT  >  NC_002947/532096‑532389

cTCAAGGTTGCTCCGGAAAGCGAGCGTTTGCTGGACCAAACGGTGCTCTTGGCTCTTTCCAATGATTTCAAAGACTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTcaca                                                                                                                                                   <  8:86015/149‑1 (MQ=255)

cTCAAGGTTGCTCCGGAAAGCGAGCGTTTGCTGGACCAAACGGTGCTCTTGGCTCTTTCCAATGATTTCAAAGACTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTcaca                                                                                                                                                   <  2:333852/149‑1 (MQ=255)

cTCAAGGTTGCTCCGGAAAGCGAGCGTTTGCTGGACCAAACGGTGCTCTTGGCTCTTTCCAATGATTTCAAAGACTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTca                                                                                                                                                     >  1:32267/1‑147 (MQ=255)

 tCAAGGTTGCTCCGGAAAGCGAGCGTTTGCTGGACCAAACGGTGCTCTTGGCTCTTTCCAATGATTTCAAAGACTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAg                                                                                                                                                  >  3:248258/1‑149 (MQ=255)

  aaaGGTTGCTCCGGAAAGCGAGCGTTTGCTGGACCAAACGGTGCTCTTGGCTCTTTCCAATGATTTCAAAGACTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAgg                                                                                                                                                 >  3:331059/2‑149 (MQ=255)

      gTTGCTCCGGAAAGCGAGCGTTTGCTGGACCAAACGGTGCTCTTGGCTCTTTCCAATGATTTCAAAGACTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGaa                                                                                                                                              >  1:386222/1‑148 (MQ=255)

         gCTCCGGAAAGCGAGCGTTTGCTGGACCAAACGGTGCTCTTGGCTCTTTCCAATGATTTCAAAGACTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAacac                                                                                                                                           <  3:161068/148‑1 (MQ=255)

           tCCGGAAAGCGAGCGTTTGCTGGACCAAACGGTGCTCTTGGCTCTTTCCAATGATTTCAAAGACTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAAcaccac                                                                                                                                        >  5:159229/1‑149 (MQ=255)

             cGGAAAGCGAGCGTTTGCTGGACCAAACGGTGCTCTTGGCTCTTTCCAATGATTTCAAAGACTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACt                                                                                                                                       <  6:159229/148‑1 (MQ=255)

               gAAAGCGAGCGTTTGCTGGACCAAACGGTGCTCTTGGCTCTTTCCAATGATTTCAAAGACTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAg                                                                                                                                    >  3:372169/1‑149 (MQ=255)

                aaaGCGAGCGTTTGCTGGACCAAACGGTGCTCTTGGCTCTTTCCAATGATTTCAAAGACTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAgg                                                                                                                                   <  2:271727/149‑1 (MQ=255)

                     gagcgTTTGCTGGACCAAACGGTGCTCTTGGCTCTTTCCAATGATTTCAAAGACTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAac                                                                                                                                             >  1:173333/1‑134 (MQ=255)

                     gagcgTTTGCTGGACCAAACGGTGCTCTTGGCTCTTTCCAATGATTTCAAAGACTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAac                                                                                                                                             <  2:173333/134‑1 (MQ=255)

                     gagcgTTTGCTGGACCAAACGGTGCTCTTGGCTCTTTCCAATGATTTCAAAGACTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAggtgg                                                                                                                                >  1:175114/1‑147 (MQ=255)

                     gagcgTTTGCTGGACCAAACGGTGCTCTTGGCTCTTTCCAATGATTTCAAAGACTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAGGTGGTa                                                                                                                              <  7:378664/149‑1 (MQ=255)

                         gTTTGCTGGACCAAACGGTGCTCTTGGCTCTTTCCAATGATTTCAAAGACTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAGGTGGTAGAAc                                                                                                                          <  2:32267/149‑1 (MQ=255)

                         gTTTGCTGGACCAAACGGTGCTCTTGGCTCTTTCCAATGATTTCAAAGACTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAGGTGGTAGAAc                                                                                                                          >  3:85623/1‑149 (MQ=255)

                          tttGCTGGACCAAACGGTGCTCTTGGCTCTATCCAATGATTTCAAAGACTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAGGTGGTAGAACt                                                                                                                         <  6:278765/149‑1 (MQ=255)

                              cTGGACCAAACGGTGCTCTTGGCTCTTTCCAATGATTTCAAAGACTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAGGTGGTAGAACTGgaa                                                                                                                     >  2:21100‑M2/1‑146 (MQ=255)

                                  aCCAAACGGTGCTCTTGGCTCTTTCCAATGATTTCAAAGACTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCcagttctaccacctgagtggtgttccctgtgaagcgg                                                                                                                 <  1:133843‑M1/149‑38 (MQ=255)

                                  aCCAAACGGTGCTCTTGGCTCTTTCCAATGATTTCAAAGACTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCcagttctaccacctgagtggtgttccctgtgaagcgg                                                                                                                 <  8:46470‑M1/149‑38 (MQ=255)

                                   ccAAACGGTGCTCTTGGCTCTTTCCAATGATTTCAAAGACTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCcagttctaccacctgagtggtgttccctgtgaagcggg                                                                                                                <  4:199481‑M1/149‑39 (MQ=255)

                                    cAAACGGTGCTCTTGGCTCTTTCCAATGATTTCAAAGACTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAGGTGGTAGAACTGGAAGCGgtg                                                                                                               <  1:404098/149‑1 (MQ=255)

                                      aaCGGTGCTCTTGGCTCTTTCCAATGATTTCAAAGACTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAgg                                                                                                                                   >  3:307238/1‑127 (MQ=255)

                                      aaCGGTGCTCTTGGCTCTTTCCAATGATTTCAAAGACTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAgg                                                                                                                                   <  4:307238/127‑1 (MQ=255)

                                      aaCGGTGCTCTTGGCTCTTTCCAATGATTTCAAAGACTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAGGTGGTAGAACTGGAAGCGgtgt                                                                                                              >  4:24629/1‑148 (MQ=255)

                                         ggTGCTCTTGGCTCTTTCCAATGATTTCAAAGACTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAg                                                                                                                                    >  4:350381/1‑123 (MQ=255)

                                         ggTGCTCTTGGCTCTTTCCAATGATTTCAAAGACTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAg                                                                                                                                    <  3:350381/123‑1 (MQ=255)

                                         ggTGCTCTTGGCTCTTTCCAATGATTTCAAAGACTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAGGTGGTAGAACTGGAAGCGGTGTCa                                                                                                            >  7:376908/1‑147 (MQ=255)

                                         ggTGCTCTTGGCTCTTTCCAATGATTTCAAAGACTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAGGTGGTAGAACTGGAAGCGGTGTCa                                                                                                            >  1:162019/1‑147 (MQ=255)

                                              tctTGGCTCTTTCCAATGATTTCAAAGACTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAGGTGGTAGAACTGGAAGCGGTGTCAAagcagc                                                                                                     >  1:219133/1‑149 (MQ=255)

                                               ctTGGCTCTTTCCAATGATTTCAAAGACTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAGGTGGTAGAACTGGAAGCGGTGTCAAagcagc                                                                                                     >  4:103513/1‑148 (MQ=255)

                                                     tctTTCCAATGATTTCAAAGACTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAGGTGGTAGAACTGGAAGCGGTGTCAAAGCAGCTAAGtt                                                                                               >  4:407994/1‑148 (MQ=255)

                                                       tttCCAATGATTTCAAAGACTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAGGTGGTAGAACTGGAAGCGGTGTCAAAGCAGCTAAGTTTCa                                                                                            <  4:331059/149‑1 (MQ=255)

                                                         tCCAATGATTTCAAAGACTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAGGTGGTAGAACTGgaagcg                                                                                                                  >  4:87639‑M2/1‑119 (MQ=255)

                                                         tCCAATGATTTCAAAGACTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAGGTGGTAGAACTGgaagcg                                                                                                                  <  3:87639‑M2/125‑7 (MQ=255)

                                                         tCCAATGATTTCAAAGACTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAGGTGGTAGAACTGGAAGCGGTGTCAAAGCAGCTAAGTTTCAg                                                                                           <  5:314314/148‑1 (MQ=255)

                                                          ccAATGATTTCAAAGACTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAGGTGGTAGAACTGGAAGCGGTGTCAAAGCAGCTAAGTTTCAGAt                                                                                         >  6:251192/1‑149 (MQ=255)

                                                          ccAATGATTTCAAAGACTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAGGTGGTAGAACTGGAAGCGGTGTCAAAGCAGCTAAGTTTCAGAt                                                                                         >  1:97785/1‑149 (MQ=255)

                                                           cAATGATTTCAAAGACTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAGGTGGTAGAACTGgaagcg                                                                                                                  >  7:89861‑M2/1‑117 (MQ=255)

                                                             aTGATTTCAAAGACTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAGGTGGTAGAACTGGAAGCGGTGTCAAAGCAGCTAAGTTTCAGATttg                                                                                      <  2:386222/149‑1 (MQ=255)

                                                                aTTTCAAAGACTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAGGTGGTAGAACTGGAAGCGGTGTCAAAGCAGCTAAGTTTCAGTTttgat                                                                                    <  4:248258/148‑1 (MQ=255)

                                                                  ttCAAAGACTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAGGTGGTAGAACTGGAAGCGGTGTCAAagc                                                                                                        <  3:380696/126‑1 (MQ=255)

                                                                    cAAAGACTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAGGTGGTAGAACTGgaagcg                                                                                                                  <  4:284497‑M2/114‑7 (MQ=255)

                                                                    cAAAGACTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAGGTGGTAGAACTGgaagcg                                                                                                                  >  3:284497‑M2/1‑108 (MQ=255)

                                                                     aaaGACTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGAGGATTAGCTTGATAGAATGGCGCCCGCTTCACTGGGAACACCACTGAGGTGGTAGATCTGGATGAGGTGTCAACGCAGCTAAGTTTCAGATttgattgata                                                                               >  8:385359/1‑146 (MQ=255)

                                                                     aaaGACTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAGGTGGTAGAACTGg                                                                                                                       >  8:387113‑M2/1‑107 (MQ=255)

                                                                     aaaGACTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAGGTGGTAGAACTGg                                                                                                                       <  7:387113‑M2/108‑2 (MQ=255)

                                                                     aaaGACTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAGGTGGTAGAACTGGAAGCGGTGTCAAAGCAGCTAAGTTTCAGATttga                                                                                     <  8:170120/142‑1 (MQ=255)

                                                                     aaaGACTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAGGTGGTAGAACTGGAAGCGGTGTCAAAGCAGCTAAGTTTCAGATttga                                                                                     >  7:170120/1‑142 (MQ=255)

                                                                     aaaGACTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAGGTGGTAGAACTGGAAGCGGTGTCAAAGCAGCTAAGTTTCAGATTTGATTGaaa                                                                               >  8:335579/1‑148 (MQ=255)

                                                                         aCTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAGGTGGTAGAACTGGAAGCGGTGTCAAAGCAGCTAAGTTTCAGATTTGATTGAAAAAAtt                                                                          <  2:175114/149‑1 (MQ=255)

                                                                          cTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATATCTTGATAGTATGGCGCCCGCTTCACAGTGAACTCCACTCAGGTGGTAGAACTGGAAGCGGTGTCAAAGCAGCTAAGTTTCAGATTTGATTGAAAAAAttt                                                                         <  4:79331/149‑1 (MQ=255)

                                                                           ttAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAGGTGGTAGAACTGGAAGCGGTGTCAAAGCAGCTAAGTTTCAGATTTGATTGAAAAAAttt                                                                         >  1:113034/1‑148 (MQ=255)

                                                                             aaaaCATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAGGTGGTAGAACTGGAAGCGGTGTCAAAGCAGCTAAGTTTCAGATTTGATTGAAAAAATTTGa                                                                       <  3:224391/148‑1 (MQ=255)

                                                                             aaaaCATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAGGTGGTAGAACTGGAAGCGGTGTCAAAGCAGCTAAGTTTCAGATTTGATTGAAAAAATTTGa                                                                       >  6:137990/1‑148 (MQ=255)

                                                                              aaaCATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAGGTGGTAGAACTGGAAGCGGTGTCAAAGCAGCTAAGTTTCAGATTTGATTGAAAAAATTTGaa                                                                      <  4:372169/148‑1 (MQ=255)

                                                                                aCATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAGGTGGTAGAACTGGAAGCGGTGTc                                                                                                             <  7:204665/107‑1 (MQ=255)

                                                                                aCATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAGGTGGTAGAACTGGAAGCGGTGTc                                                                                                             >  8:204665/1‑107 (MQ=255)

                                                                                      aaTTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAGGTGGTAGAACTGGAAGCGGTGTCaaa                                                                                                          <  4:335896/104‑1 (MQ=255)

                                                                                          attTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAGGTGGTAGAACTGGAAGCGGTGTCAAAGCAGCTAAg                                                                                                 >  4:26134/1‑109 (MQ=255)

                                                                                          attTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAGGTGGTAGAACTGGAAGCGGTGTCAAAGCAGCTAAg                                                                                                 <  3:26134/109‑1 (MQ=255)

                                                                                           ttttCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAGGTGGTAGAACTGGAAGCGGTGTCAAAGCAGCTAAGTTTCAGATTTGATTGAAAAAATTTGAAAAAACGCTTGaca                                                         <  6:31409/148‑1 (MQ=255)

                                                                                              tCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAGGTGGTAGAACTGGAAGCGGTGTCAAAGCAGCTAAGTTTCAGATTTGATTGAAAAAATTTGAAAAAACGCTTGACACTa                                                      <  5:251192/148‑1 (MQ=255)

                                                                                                  ccAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAGGTGGTAGAACTGGAAGCGGTGTCAAAGCAGCTAAGTTTCAGATTTGATTGAAAAAATTTGAAAAAACGCTTGACACTAGGACg                                                 <  3:407994/149‑1 (MQ=255)

                                                                                                   cAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAGGTGGTAGAACTGGAAGCGGTGTCAAAGCAGCTAAGTTTCAGATTTGATTGAAAAAATTTGAAAAAACGCTTGACACTAGGACgg                                                >  8:179944/1‑149 (MQ=255)

                                                                                                    aGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAGGTGGTAGAACTGGAAGCGGTGTCAAAGCAGCTAAGTTTCAGATTTGATTGAAAAAATTTGAAAAAACGCTTGACACTAGGACGGc                                               <  3:24629/149‑1 (MQ=255)

                                                                                                     gggTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAGGTGGTAGAACTGGAAGCGGTGTCAAAGCAGCTAAGTTTCAGATTTGATTGAAAAAATTTGAAAAAACGCTTGACACTAGGACGGCa                                              <  2:113034/149‑1 (MQ=255)

                                                                                                     gggTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAGGTGGTAGAACTGGAAGCGGTGTCAAAGCAGCTAAGTTTCAGATTTGATTGAAAAAATTTGAAAAAACGCTTGACACTAGGACGGCa                                              <  7:335579/149‑1 (MQ=255)

                                                                                                          ttGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAGGTGGTAGAACTGGAAGCGGTGTCAAAGCAGCTAAGTTTCAGATTTGATTGAAAAAATTTGAAAAAACGCTTGACACTAGGACGGCAGACa                                          >  3:335208/1‑148 (MQ=255)

                                                                                                            gCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAGGTGGTAGAACTGGAAGCGGTGTCAAAGCAGCTAAGTTTCAGATTTGATTGAAAAAAttt                                                                         >  1:53080/1‑115 (MQ=255)

                                                                                                            gCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAGGTGGTAGAACTGGAAGCGGTGTCAAAGCAGCTAAGTTTCAGATTTGATTGAAAAAAttt                                                                         <  2:53080/115‑1 (MQ=255)

                                                                                                             cAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAGGTGGTAGAACTGGAAGCGGTGTCAAAGCAGCTAAGTTTCAGATTTGATTGAAAAAATTTGAAAAAACGCTTGACACTAGGACGGCAGACAAATa                                      <  8:376908/149‑1 (MQ=255)

                                                                                                              aaCTGACGAATAGCTTGATAGAATGGCGCCTGCTTCACAGGGAACACCACTCAGGTGGTAGAACTGGAAGCGgtgt                                                                                                              >  1:36192/1‑76 (MQ=255)

                                                                                                              aaCTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAGGTGGTAGAACTGGAAGCGgtgt                                                                                                              <  2:36192/76‑1 (MQ=255)

                                                                                                              aaCTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAGGTGGTAGAACTGGAAGCGGTGTCAAAGCAGCTAAGTTTCAGATTTGATTGAAAAAATTTGAAAAAACGCTTGACACTAGGACGGCAGACaaa                                        >  8:104054/1‑146 (MQ=255)

                                                                                                                     gAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAGGTGGTAGAACTGGAAGCGGTGTCAAAGCAGCTAAGTTTCAGATTTGATTGAAAAAATTTGAAAAAACGCTTGACACTAGGAAGGAAGACAAATAGAATGcct                              >  2:341925/1‑148 (MQ=255)

                                                                                                                        tAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAGGTGGTAGAACTGGAAGCGGTGTCAAAGCAGCTAAGTTTCAGATTTGATTGAAAAAATTTGAAAAAACGCTTGACACTAGGACGGCAGACAAATAGAATGCCGGcc                           <  5:137990/149‑1 (MQ=255)

                                                                                                                           cTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAGGTGGTAGAACTGGAAGCGGTGTCAAAGCAGCTAAGTTTCAGATTTGATTGAAAAAATTTGAAAAAACg                                                                >  7:248594/1‑109 (MQ=255)

                                                                                                                                  gAATGGCGCCCGCTTCACAGGGAACACCACTCAGGTGGTAGAACTGGAAGCGGTGTCAAAGCAGCTAAGTTTCAGATTTGATTGAAAAAATTTGAAAAAACGCTTGacac                                                        <  3:50980/110‑1 (MQ=255)

                                                                                                                                  gAATGGCGCCCGCTTCACAGGGAACACCACTCAGGTGGTAGAACTGGAAGCGGTGTCAAAGCAGCTAAGTTTCAGATTTGATTGAAAAAATTTGAAAAAACGCTTGacac                                                        >  4:50980/1‑110 (MQ=255)

                                                                                                                                  gAATGGCGCCCGCTTCACAGGGAACACCACTCAGGTGGTAGAACTGGAAGCGGTGTCAAAGCAGCTAAGTTTCAGATTTGATTGAAAAAATTTGAAAAAACGCTTGACACTAGGACGGCAGACAAATAGAATGCCGGCCACATCTGGa                  <  7:104054/148‑1 (MQ=255)

                                                                                                                                         gcCCGCTTCACAGGGAACACCACTCAGGTGGTAGAACTGGAAGCGGTGTCAAAGCAGCTAAGTTTCAGATTTGATTGAAAAAATTTGAAAAAACGCTTGACACTAGGACGGCAGACAAATAGAATGCCGGCCACATCTGGAGGGATTcc          >  2:354196/1‑149 (MQ=255)

                                                                                                                                           ccGCTTCACAGGGAACACCACTCAGGTGGTAGAACTGgaagcgggcgccattctatcaagctattcgtcagttgcaataccctggcagaaaataattttatgttttaagtctttgaaatcattggaaagagccaagagcaccgtttggt        <  8:46470‑M2/149‑113 (MQ=255)

                                                                                                                                           ccGCTTCACAGGGAACACCACTCAGGTGGTAGAACTGgaagcgggcgccattctatcaagctattcgtcagttgcaataccctggcagaaaataattttatgttttaagtctttgaaatcattggaaagagccaagagcaccgtttggt        <  1:133843‑M2/149‑113 (MQ=255)

                                                                                                                                           ccGCTTCACAGGGAACACCACTCAGGTGGTAGAACTGGAAGCGATGTCAAAGCAGCTAAGTTTCAGATTTGATTGAAAAAATTTGAAAAAACGCTTGACACTAGGACGGCAGACAAATAGAATGCCGGCCACATCTGGAGGGATTccc         >  1:77780/1‑148 (MQ=255)

                                                                                                                                            cGCTTCgagttcttccagctgagtggtgttccctgtgtagcgggcgccattctatcaagcttttcgtcagttgcaataccctggcagaaaataattttatgttttaagtctttgaaatcattg                                 <  8:89861‑M1/123‑118 (MQ=255)

                                                                                                                                            cGCTTCcagttctaccacctgagtggtgttccctgtgaagcgggcgccattctatcaagctattcgtcagttgcaataccctggcagaaaataattttatgttttaagtctttgaaatcattgga                               >  4:87639‑M1/1‑6 (MQ=255)

                                                                                                                                            cGCTTCcagttctaccacctgagtggtgttccctgtgaagcgggcgccattctatcaagctattcgtcagttgcaataccctggcagaaaataattttatgttttaagtctttgaaatcattgga                               <  3:87639‑M1/125‑120 (MQ=255)

                                                                                                                                            cGCTTCcagttctaccacctgagtggtgttccctgtgaagcgggcgccattctatcaagctattcgtcagttgcaataccctggcagaaaataattttatgttttaagtctttgaaatcattg                                 >  7:89861‑M1/1‑6 (MQ=255)

                                                                                                                                            cGCTTCcagttctaccacctgagtggtgttccctgtgaagcgggcgccattctatcaagctattcgtcagttgcaataccctggcagaaaataattttatgttttaagtctttg                                          <  4:284497‑M1/114‑109 (MQ=255)

                                                                                                                                            cGCTTCcagttctaccacctgagtggtgttccctgtgaagcgggcgccattctatcaagctattcgtcagttgcaataccctggcagaaaataattttatgttttaagtctttg                                          >  3:284497‑M1/1‑6 (MQ=255)

                                                                                                                                            cGCTTCACAGGGAACACCACTCAGGTGGTAGAACTGGAAGCGGTGTCAAAGCAGCTAAGTTTCAGATTTGATTGAAAAAATTTGAAAAAACGCTTGACACTAGGACGGCAGACAAATAGAATGCCGGCCACATCTGGAGGGATTCCCGa       <  8:357477/149‑1 (MQ=255)

                                                                                                                                               ttCcagttctaccacctgagtggtgttccctgtgaagcgggcgccattctatcaagctattcgtcagttgcaataccctggcagaaaataattttatgttttaagtctttgaaatcattggaaagagccaagagcaccgtttggtccag    >  2:21100‑M1/1‑3 (MQ=255)

                                                                                                                                                 ccagttctaccacctgagtggtgttccctgtgaagcgggcgccattctatcaagctattcgtcagttgcaataccctggcagaaaataattttatgttttaagtcttt                                           <  7:387113‑M1/108‑108 (MQ=255)

                                                                                                                                                 ccagttctaccacctgagtggtgttccctgtgaagcgggcgccattctatcaagctattcgtcagttgcaataccctggcagaaaataattttatgttttaagtcttt                                           >  8:387113‑M1/1‑1 (MQ=255)

                                                                                                                                                 cacaGGGAACACCACTCAGGTGGTAGAACTGgaagcgggcgccattctatcaagctattcgtcagttgcaataccctggcagaaaataattttatgttttaagtctttgaaatcattggaaagagccaagagcaccgtttggtccagc   >  3:199481‑M2/1‑31 (MQ=255)

                                                                                                                                                 cacaGGGAACACCACTCAGGTGGTAGAACTGGAAGCGGTGTCAAAGCAGCTAAGTTTCAGATTTGATTGAAAAAATTTGAAAAAACGCTTGACACTAGGACGGCAGACAAATAGAATGCCg                              <  1:263819/121‑1 (MQ=255)

                                                                                                                                                 cacaGGGAACACCACTCAGGTGGTAGAACTGGAAGCGGTGTCAAAGCAGCTAAGTTTCAGATTTGATTGAAAAAATTTGAAAAAACGCTTGACACTAGGACGGCAGACAAATAGAATGCCg                              >  2:263819/1‑121 (MQ=255)

                                                                                                                                                 cacaGGGAACACCACTCAGGTGGTAGAACTGGAAGCGGTGTCAAAGCAGCTAAGTTTCAGATTTGATTGAAAAAATTTGAAAAAACGCTTGACACTAGGACGGCAGACAAATAGAATGCCGGCCACATCTGGAGGGATTCCCGAGCGGt  >  5:274943/1‑149 (MQ=255)

CTCAAGGTTGCTCCGGAAAGCGAGCGTTTGCTGGACCAAACGGTGCTCTTGGCTCTTTCCAATGATTTCAAAGACTTAAAACATAAAATTATTTTCTGCCAGGGTATTGCAACTGACGAATAGCTTGATAGAATGGCGCCCGCTTCACAGGGAACACCACTCAGGTGGTAGAACTGGAAGCGGTGTCAAAGCAGCTAAGTTTCAGATTTGATTGAAAAAATTTGAAAAAACGCTTGACACTAGGACGGCAGACAAATAGAATGCCGGCCACATCTGGAGGGATTCCCGAGCGGT  >  NC_002947/532096‑532389

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.