New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	568013 =	53 (0.830)	3 (0.050)	3/246	NT	6.0%	coding (1483/2835 nt)	uvrA	uvrABC excinuclease protein A
	?	NC_002947	568060 =	42 (0.680)					coding (1436/2835 nt)	uvrA	uvrABC excinuclease protein A

CTGACCCTTACTGGCCGGCGTGGCGAAATCGCGGCAAAAATCCTCAAGGAAATCTGCGAACGACTTCAGTTCCTGGTCAATGTCGGTCTCGACTACCTGACCCTGGATCGTAGCGCCGACACCCTGTCCGGCGGTGAAGCGCAACGTATCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/568163‑568013 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atccAGGGTCAGGTAGTCGAGACCGACATTGACCAGGAACTGAAGTCGTTCGCAGATTTCCTTGAGGATTTTTGCCGCGATTTCGCCACGCCGGCCAGTAAGGGT  >  NC_002947/568060‑568160                                                                                                                                                                                                                                                              CTGACCCTTACTGGCCGGCGTGGCGAAATCGCGGCAAAAATCCTCAAGGAAATCTGCGAACGACTTCAGTTCCTGGTCAATGTCGGTCTCGACTACCTGACCCTGGATCGTAGCGCCGACACCCTGTCCGGCGGTGAAGCGCAACGTAT                                                                                                         >  5:308356/1‑149                                                                                                      CCTGGATCGTAGCGCCGACACCCTGTCCGGCGGTGAAGCGCAACGTATCCAGGGTCAGGTAGTCGAGACCGACATTGACCAGGAACTGAAGTCGTTCGCAGATTTCCTTGAGGATTTTTGCCGCGATTTCGCCACGCCGGCCAGTAAGG    <  3:159048/149‑1                                                                                                      CCTGGATCGTAGCGCCGACACCCTGTCCGGCGGTGAAGCGCAACGTATCCAGGGTCAGGTAGTCGAGACCGACATTGACCAGGAACTGAAGTCGTTCGCAGATTTCCTTGAGGATTTTTGCCGCGATTTCGCCACGCCGGCCAGTAAGG    >  4:159048/1‑149                                                                                                        TGGATCGTAGCGCCGACACCCTGTCCGGCGGTGAAGCGCAACGTATCCAGGGTCAGGTAGTCGAGACCGACATTGACCAGGAACTGAAGTCGTTCGCAGATTTCCTTGAGGATTTTTGCCGCGATTTCGCCACGCCGGCCAGTAAGGGT  >  7:325151/1‑149                                                                                                                                                                                                                                                              CTGACCCTTACTGGCCGGCGTGGCGAAATCGCGGCAAAAATCCTCAAGGAAATCTGCGAACGACTTCAGTTCCTGGTCAATGTCGGTCTCGACTACCTGACCCTGGATCGTAGCGCCGACACCCTGTCCGGCGGTGAAGCGCAACGTATCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/568163‑568013 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atccAGGGTCAGGTAGTCGAGACCGACATTGACCAGGAACTGAAGTCGTTCGCAGATTTCCTTGAGGATTTTTGCCGCGATTTCGCCACGCCGGCCAGTAAGGGT  >  NC_002947/568060‑568160

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.