| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 799772 = | 47 (0.730) | 3 (0.050) | 3/246 | NT | 5.8% | coding (701/969 nt) | ispB | octaprenyl diphosphate synthase |
| ? | NC_002947 | 799809 = | 52 (0.840) | coding (664/969 nt) | ispB | octaprenyl diphosphate synthase | |||||
CGCTGGCCCAGGCCACCGACGAGCAGCGCGAAGCCCTGCGTACCTTTGGCGACCATCTGGGCGTGGCCTTCCAGCTGGTCGACGACCTGCTGGACTACAAGGGTGACTCGCAGACCCTGGGCAAGAACGTCGGTGACGACCTGGCCGAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/799922‑799772‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agggTCTGCGAGTCACCCTTGTAGTCCAGCAGGTCGTCGACCAGCTGGAAGGCCACGCCCAGATGGTCGCCAAAGGTACGCAGGGCTTCGCGCTGCTCGTCGGTGGCCTGGGCCA > NC_002947/799809‑799919 CGCTGGCCCAGGCCACCGACGAGCAGCGCGAAGCCCTGCGTACCTTTGGCGACCATCTGGGCGTGGCCTTCCAGCTGGTCGACGACCTGCTGGACTACAAGGGTGACTCGCAGACCCTGGGCAAGAACGTCGGTGACGACCTGGCCGAG < 8:254751/149‑1CGCTGGCCCAGGCCACCGACGAGCAGCGCGAAGCCCTGCGTACCTTTGGCGACCATCTGGGCGTGGCCTTCCAGCTGGTCGACGACCTGCTGGACTACAAGGGTGACTCGCAGACCCTGGGCAAGAACGTCGGTGACGACCTGGCCGAG < 8:340365/149‑1 GCTGGCCCAGGCCACCGACGAGCAGCGCGAAGCCCTGCGTACCTTTGGCGACCATCTGGGCGTGGCCTTCCAGCTGGTCGACGACCTGCTGGACTACAAGGGTGACTCGCAGACCCTGGGCAAGAACGTCGGTGACGACCTGGCCGAGG < 4:408217/149‑1 GCAGACCCTGGGCAAGAACGTCGGTGACGACCTGGCCGAGGGTCTGCGAGTCACCCTTGTAGTCCAGCAGGTCGTCGACCAGCTGGAAGGCCACGCCCAGATGGTCGC > 3:230522/1‑108 GCAGACCCTGGGCAAGAACGTCGGTGACGACCTGGCCGAGGGTCTGCGAGTCACCCTTGTAGTCCAGCAGGTCGTCGACCAGCTGGAAGGCCACGCCCAGATGGTCGC < 4:230522/108‑1 ACCCTGGGCAAGAACGTCGGTGACGACCTGGCCGAGGGTCTGCGAGTCACCCTTGTAGTCCAGCAGGTCGTCGACCAGCTGGAAGGCCACGCCCAGATGGTCGCCAAAGGTACGCAGGGCTTCGCGCTGCTCGTCGGTGGCCTGGGCCA > 4:27701/1‑149 CGCTGGCCCAGGCCACCGACGAGCAGCGCGAAGCCCTGCGTACCTTTGGCGACCATCTGGGCGTGGCCTTCCAGCTGGTCGACGACCTGCTGGACTACAAGGGTGACTCGCAGACCCTGGGCAAGAACGTCGGTGACGACCTGGCCGAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/799922‑799772‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agggTCTGCGAGTCACCCTTGTAGTCCAGCAGGTCGTCGACCAGCTGGAAGGCCACGCCCAGATGGTCGCCAAAGGTACGCAGGGCTTCGCGCTGCTCGTCGGTGGCCTGGGCCA > NC_002947/799809‑799919 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |