| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 967108 = | 55 (0.860) | 3 (0.050) | 3/234 | NT | 5.9% | coding (74/297 nt) | PP_0829 | hypothetical protein |
| ? | NC_002947 | 967158 = | 45 (0.760) | coding (124/297 nt) | PP_0829 | hypothetical protein | |||||
GTCAAAACGAGGCTTCGCGCCAGGGCTCAGCGCCTTGTACAGGCTTTCTCTACCCAGCCCACTCTCCGTAGCAATATGTGTCATGCCCCGTGCACGAGCGATATGGCCAAGTGCTCGAATGATTTCCTCGGTATCGCCATCTGATAGCACTTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/967262‑967108‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcacttggcCATATCGCTCGTGCACGGGGCATGACACATATTGCTACGGAGAGTGGGCTGGGTAGAGAAAGCCTGTACAAGGCGCTGAGCCCTGGCGCGAAGCCTCGTTTTGACACTGTATTGAGGGTCATTCGTGCTCTGGGGGTGGACCTT > NC_002947/967158‑967301 GTCAAAACGAGGCTTCGCGCCAGGGCTCAGCGCCTTGTACAGGCTTTCTCTACCCAGCCCACTCTCCGTAGCAATATGTGTCATGCCCCGTGCACGAGCGATATGGCCAAGTGCTCGAATGATTTCCTCGGTATCGCCATCTGATAGC > 4:270946/1‑148 CAAAACGAGGCTTCGCGCCAGGGCTCAGCGCCTTGTACAGGCTTTCTCTACCCAGCCCACTCTCCGTAGCAATATGTGTCATGCCCCGTGCACGAGCGATATGGCCAAGTGCTCGAATGATTTCCTCGGTATCGCCATCTGATAGCAC < 3:270946/148‑1 CAAAACGAGGCTTCGCGCCAGGGCTCAGCGCCTTGTACAGGCTTTCTCTACCCAGCCCACTCTCCGTAGCAATATGTGTCATGCCCCGTGCACGAGCGATATGGCCAAGAGCTCGAATGATTTCCTCGGTATCGCCATCTGATAGCACT > 7:18608/1‑149 AAAACGAGGCTTCGCGCCAGGGCTCAGCGCCTTGTACAGGCTTTCTCTACCCAGCCCACTCTCCGTAGCAATATGTGTCATGCCCCGTGCACGAGCGATATGGCCAAGTGCTCGAATGATTTCCTCGGTATCGCCATCTGATAGCACTT > 3:64636/1‑149 AACGAGGCTTCGCGCCAGGGCTCAGCGCCTTGTACAGGCTTTCTCTACCCAGCCCACTCTCCGTAGCAATATGTGTCATGCCCCGTGCACGAGCGATATGGCCAAGTGCTCGAATGATTTCCTCGGTATCGCCATCTGATAGCACTTGG < 8:115537/149‑1 CCAAGTGCTCGAATGATTTCCTCGGTATCGCCATCTGATAGCACTTGGCCATATCGCTCGTGCACGGGGCATGACACATATTGCTACGGAGAGTGGGCTGGGTAGAGAAAGCCTGTACAAGGCGCTGAGCCCTGGCGCGAAGCCT > 7:158408/1‑145 CCAAGTGCTCGAATGATTTCCTCGGTATCGCCATCTGATAGCACTTGGCCATATCGCTCGTGCACGGGGCATGACACATATTGCTACGGAGAGTGGGCTGGGTAGAGAAAGCCTGTACAAGGCGCTGAGCCCTGGCGCGAAGCCT < 8:158408/145‑1 CAAGTGCTCGAATGATTTCCTCGGTATCGCCATCTGATAGCACTTGGCCATATCGCTCGTGCACGGGGCATGACACATATTGCTACGGAGAGTGGGCTGGGTAGAGAAAGCCTGTACAAGGCGCTGAGCCCTGGCGCGAAGCCTCGTTT > 3:338204/1‑149 TTGGCCATATCGCTCGTGCACGGGGCATGACACATATTGCTACGGAGAGTGGGCTGGGTAGAGAAAGCCTGTACAAGGCGCTGAGCCCTGGCGCGAAGCCTCGTTTTGACACTGTATTGAGGGTCATTCGTGCTCTGGGGGTGGACCTT > 1:311483/1‑149 GTCAAAACGAGGCTTCGCGCCAGGGCTCAGCGCCTTGTACAGGCTTTCTCTACCCAGCCCACTCTCCGTAGCAATATGTGTCATGCCCCGTGCACGAGCGATATGGCCAAGTGCTCGAATGATTTCCTCGGTATCGCCATCTGATAGCACTTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/967262‑967108‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcacttggcCATATCGCTCGTGCACGGGGCATGACACATATTGCTACGGAGAGTGGGCTGGGTAGAGAAAGCCTGTACAAGGCGCTGAGCCCTGGCGCGAAGCCTCGTTTTGACACTGTATTGAGGGTCATTCGTGCTCTGGGGGTGGACCTT > NC_002947/967158‑967301 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |