New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 120075148 (0.750)4 (0.070) 4/242 NT 7.9% coding (407/456 nt) gspG protein secretion protein
?NC_002947 = 1200763 47 (0.770)coding (419/456 nt) gspG protein secretion protein

GAAAAAGCCGGCTCAGGAGCCGCTGCCTCGGGCCTGGCGCAGTGATGGCTACGTGCGTCGCCTGCCGGAAGACCCGTGGGGCACCCCTTATCAGTACCGCATGCCCGGTGAACATGGCCGGGTCGATGTGTACTCGCTGGGCGCCGATGGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1200599‑1200751
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcctTCGCCGCCCGGCAGGCCATCGGCGCCCAGCGAGTACACATCGACCCGGCCATGTTCACCGGGCATGCGGTACTGATAAGGGGTGCCCCACGGGTCTTCCGGCAGGCGACGCACGTAGCCATCACTGCGCCAGGCCCGAGGCAGCG  <  NC_002947/1200763‑1200619
                                                                                                                                                                                                                                                                                                           
GAAAAAGCCGGCTCAGGAGCCGCTGCCTCGGGCCTGGCGCAGTGAGTGGCTACGTGCGTCGCCTGCCGGAAGACCCGTGGGGCACCCCTTATCAGTACCGCATGCCCGGTGAACATGGCCGGGTCGATGTGTACTCGCTGGGCGCCGAT                                                                                                                                                        >  1:291903/1‑149
 AAAAAGCCGGCTCAGGAGCCGCTGCCTCGGGCCTGGCGCAGTGATGGCTACGTGCGTCGCCTGCCGGAAGACCCGTGGGGCACCCCTTATCAGTACCGCATGCCCGGTGAACATGGCCGGGTCGATGTGTACTCGCTGGGCGCCGATG                                                                                                                                                       <  5:183615/148‑1
  AAAAGCCGGCTCAGGAGCCGCTGCCTCGGGCCTGGCGCAGTGATGGCTACGTGCGTCGCCTGCCGGAAGACCCGTGGGGCACCCCTTATCAGTACCGCATGCCCGGTGAACATGGCCGGGTCGATGTGTACTCGCTGGGCGCCGATGGC                                                                                                                                                     <  6:41262/149‑1
                                                               TGCCGGAAGACCCGTGGGGCACCCCTTATCAGTACCGCATGCCCGGTGAACATGGCCGGGTCGATGTGTACTCGCTGGGCGCCGATGGCCTTCGCCGCCCGGCAGGCCATCGGC                                                                                                                            <  3:299699/114‑1
                                                               TGCCGGAAGACCCGTGGGGCACCCCTTATCAGTACCGCATGCCCGGTGAACATGGCCGGGTCGATGTGTACTCGCTGGGCGCCGATGGCCTTCGCCGCCCGGCAGGCCATCGGC                                                                                                                            >  4:299699/1‑114
                                                                                                         CCGGTGAACATGGCCGGGTCGATGTGTACTCGCTGGGCGCCGATGGCCTTCGCCGCCCGGCAGGCCATCG                                                                                                                              >  5:397707/1‑70
                                                                                                         CCGGTGAACATGGCCGGGTCGATGTGTACTCGCTGGGCGCCGATGGCCTTCGCCGCCCGGCAGGCCATCG                                                                                                                              <  6:397707/70‑1
                                                                                                                                                      GCCTTCGCCGCCCGGCAGGCCATCGGCGCCCAGCGAGTACACATCGACCCGGCCATGTTCACCGGGCATGCGGTACTGATAAGGGGTGCCCCACGGGTCTTCCGGCAGGCGACGCACGTAGCCATCACTGCGCCAGGCCCGAGGCAGCG  >  3:293114/1‑149
                                                                                                                                                                                                                                                                                                           
GAAAAAGCCGGCTCAGGAGCCGCTGCCTCGGGCCTGGCGCAGTGATGGCTACGTGCGTCGCCTGCCGGAAGACCCGTGGGGCACCCCTTATCAGTACCGCATGCCCGGTGAACATGGCCGGGTCGATGTGTACTCGCTGGGCGCCGATGGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1200599‑1200751
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcctTCGCCGCCCGGCAGGCCATCGGCGCCCAGCGAGTACACATCGACCCGGCCATGTTCACCGGGCATGCGGTACTGATAAGGGGTGCCCCACGGGTCTTCCGGCAGGCGACGCACGTAGCCATCACTGCGCCAGGCCCGAGGCAGCG  <  NC_002947/1200763‑1200619

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.