New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1200751	48 (0.750)	4 (0.070)	4/242	NT	7.9%	coding (407/456 nt)	gspG	protein secretion protein
	?	NC_002947	= 1200763	47 (0.770)					coding (419/456 nt)	gspG	protein secretion protein

GAAAAAGCCGGCTCAGGAGCCGCTGCCTCGGGCCTGGCGCAGTGA‑TGGCTACGTGCGTCGCCTGCCGGAAGACCCGTGGGGCACCCCTTATCAGTACCGCATGCCCGGTGAACATGGCCGGGTCGATGTGTACTCGCTGGGCGCCGATGGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1200599‑1200751 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcctTCGCCGCCCGGCAGGCCATCGGCGCCCAGCGAGTACACATCGACCCGGCCATGTTCACCGGGCATGCGGTACTGATAAGGGGTGCCCCACGGGTCTTCCGGCAGGCGACGCACGTAGCCATCACTGCGCCAGGCCCGAGGCAGCG  <  NC_002947/1200763‑1200619                                                                                                                                                                                                                                                                                                             GAAAAAGCCGGCTCAGGAGCCGCTGCCTCGGGCCTGGCGCAGTGAGTGGCTACGTGCGTCGCCTGCCGGAAGACCCGTGGGGCACCCCTTATCAGTACCGCATGCCCGGTGAACATGGCCGGGTCGATGTGTACTCGCTGGGCGCCGAT                                                                                                                                                        >  1:291903/1‑149  AAAAAGCCGGCTCAGGAGCCGCTGCCTCGGGCCTGGCGCAGTGA‑TGGCTACGTGCGTCGCCTGCCGGAAGACCCGTGGGGCACCCCTTATCAGTACCGCATGCCCGGTGAACATGGCCGGGTCGATGTGTACTCGCTGGGCGCCGATG                                                                                                                                                       <  5:183615/148‑1   AAAAGCCGGCTCAGGAGCCGCTGCCTCGGGCCTGGCGCAGTGA‑TGGCTACGTGCGTCGCCTGCCGGAAGACCCGTGGGGCACCCCTTATCAGTACCGCATGCCCGGTGAACATGGCCGGGTCGATGTGTACTCGCTGGGCGCCGATGGC                                                                                                                                                     <  6:41262/149‑1                                                                TGCCGGAAGACCCGTGGGGCACCCCTTATCAGTACCGCATGCCCGGTGAACATGGCCGGGTCGATGTGTACTCGCTGGGCGCCGATGGCCTTCGCCGCCCGGCAGGCCATCGGC                                                                                                                            <  3:299699/114‑1                                                                TGCCGGAAGACCCGTGGGGCACCCCTTATCAGTACCGCATGCCCGGTGAACATGGCCGGGTCGATGTGTACTCGCTGGGCGCCGATGGCCTTCGCCGCCCGGCAGGCCATCGGC                                                                                                                            >  4:299699/1‑114                                                                                                          CCGGTGAACATGGCCGGGTCGATGTGTACTCGCTGGGCGCCGATGGCCTTCGCCGCCCGGCAGGCCATCG                                                                                                                              >  5:397707/1‑70                                                                                                          CCGGTGAACATGGCCGGGTCGATGTGTACTCGCTGGGCGCCGATGGCCTTCGCCGCCCGGCAGGCCATCG                                                                                                                              <  6:397707/70‑1                                                                                                                                                       GCCTTCGCCGCCCGGCAGGCCATCGGCGCCCAGCGAGTACACATCGACCCGGCCATGTTCACCGGGCATGCGGTACTGATAAGGGGTGCCCCACGGGTCTTCCGGCAGGCGACGCACGTAGCCATCACTGCGCCAGGCCCGAGGCAGCG  >  3:293114/1‑149                                                                                                                                                                                                                                                                                                             GAAAAAGCCGGCTCAGGAGCCGCTGCCTCGGGCCTGGCGCAGTGA‑TGGCTACGTGCGTCGCCTGCCGGAAGACCCGTGGGGCACCCCTTATCAGTACCGCATGCCCGGTGAACATGGCCGGGTCGATGTGTACTCGCTGGGCGCCGATGGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1200599‑1200751 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcctTCGCCGCCCGGCAGGCCATCGGCGCCCAGCGAGTACACATCGACCCGGCCATGTTCACCGGGCATGCGGTACTGATAAGGGGTGCCCCACGGGTCTTCCGGCAGGCGACGCACGTAGCCATCACTGCGCCAGGCCCGAGGCAGCG  <  NC_002947/1200763‑1200619

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.